Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow2G3526 Salvia bowleyana HOM05D004003 ORTHO05D004595 1.6e-97 359.4 179 100.0
Migut.F01081 Erythranthe guttata HOM05D004003 ORTHO05D004595 5.1e-83 311.2 179 84.9
Oeu061668.1 Olea europaea HOM05D004003 ORTHO05D004595 8.7e-83 310.5 179 83.8
Oeu003331.1 Olea europaea HOM05D004003 ORTHO05D004595 4.3e-82 308.1 179 82.7
Cc02_g02230 Coffea canephora HOM05D004003 ORTHO05D004595 5.6e-82 307.8 179 82.1
SGA_v2.0_scaffold10G05280 Striga asiatica HOM05D004003 ORTHO05D004595 3.1e-80 302.0 179 82.1
MSTRG.8697 Avicennia marina HOM05D004003 ORTHO05D004595 2.6e-79 298.9 179 78.8
Peaxi162Scf00444g00034 Petunia axillaris HOM05D004003 ORTHO05D004595 1.1e-77 293.5 179 79.3
Nitab4.5_0011314g0010 Nicotiana tabacum HOM05D004003 ORTHO05D004595 4.2e-77 291.6 179 81.0
unitig_0.g1158 Utricularia gibba HOM05D004003 ORTHO05D004595 7.1e-77 290.8 163 83.4
DCAR_010652 Daucus carota HOM05D004003 ORTHO05D004595 3.5e-76 288.5 172 80.2
Hma1.2p1_1713F.1_g298900 Hydrangea macrophylla HOM05D004003 ORTHO05D004595 4.6e-76 288.1 173 80.9
CSS0000705 Camellia sinensis var. sinensis HOM05D004003 ORTHO05D004595 1.3e-75 286.6 178 78.1
Sopen03g003590 Solanum pennellii HOM05D004003 ORTHO05D004595 2.3e-75 285.8 179 78.8
CAN.G126.15 Capsicum annuum HOM05D004003 ORTHO05D004595 3.9e-75 285.0 179 78.2
Rhsim03G0192400 Rhododendron simsii HOM05D004003 ORTHO05D004595 5.1e-75 284.6 173 79.2
Solyc03g007660.4 Solanum lycopersicum HOM05D004003 ORTHO05D004595 5.1e-75 284.6 179 78.2
Lj1A1007T57 Lonicera japonica HOM05D004003 ORTHO05D004595 2.5e-74 282.3 177 78.0
Lj1A1007T58 Lonicera japonica HOM05D004003 ORTHO05D004595 2.5e-74 282.3 177 78.0
Rhsim09G0201100 Rhododendron simsii HOM05D004003 ORTHO05D004595 9.6e-74 280.4 173 76.9
Actinidia31844 Actinidia chinensis HOM05D004003 ORTHO05D004595 1.3e-73 280.0 170 78.2
Lsat_1_v5_gn_9_56860 Lactuca sativa HOM05D004003 ORTHO05D004595 1.3e-73 280.0 174 79.9
Sopen06g012130 Solanum pennellii HOM05D004003 ORTHO05D004595 2.1e-73 279.3 179 77.1
COL.COLO4_30289 Corchorus olitorius HOM05D004003 ORTHO05D004595 2.8e-73 278.9 179 78.2
Sc14g0006860 Simmondsia chinensis HOM05D004003 ORTHO05D004595 2.8e-73 278.9 178 76.4
PGSC0003DMG400028905 Solanum tuberosum HOM05D004003 ORTHO05D004595 2.8e-73 278.9 179 76.5
Nitab4.5_0000472g0260 Nicotiana tabacum HOM05D004003 ORTHO05D004595 4.8e-73 278.1 157 86.0
CsaV3_3G017590 Cucumis sativus L. HOM05D004003 ORTHO05D004595 6.2e-73 277.7 172 80.2
Actinidia08590 Actinidia chinensis HOM05D004003 ORTHO05D004595 8.1e-73 277.3 178 76.4
Solyc06g036350.3 Solanum lycopersicum HOM05D004003 ORTHO05D004595 8.1e-73 277.3 179 76.5
Actinidia03142 Actinidia chinensis HOM05D004003 ORTHO05D004595 1.1e-72 276.9 170 77.1
ClCG05G008500 Citrullus lanatus HOM05D004003 ORTHO05D004595 2.4e-72 275.8 164 81.7
Duzib084G0289 Durio zibethinus HOM05D004003 ORTHO05D004595 2.4e-72 275.8 174 77.6
Gohir.D11G013100 Gossypium hirsutum HOM05D004003 ORTHO05D004595 2.4e-72 275.8 178 76.4
Thecc.03G186200 Theobroma cacao HOM05D004003 ORTHO05D004595 2.4e-72 275.8 178 77.0
MELO3C006949.2 Cucumis melo HOM05D004003 ORTHO05D004595 3.1e-72 275.4 164 81.7
DCAR_020275 Daucus carota HOM05D004003 ORTHO05D004595 3.1e-72 275.4 155 84.5
Duzib205G1856 Durio zibethinus HOM05D004003 ORTHO05D004595 3.1e-72 275.4 178 77.0
HanXRQChr15g0494181 Helianthus annuus HOM05D004003 ORTHO05D004595 4.0e-72 275.0 173 79.2
Aqoxy7G00202 Aquilegia oxysepala HOM05D004003 ORTHO05D004595 5.3e-72 274.6 178 77.5
Eucgr.A02717 Eucalyptus grandis HOM05D004003 ORTHO05D004595 6.9e-72 274.2 178 75.8
Sed0014667 Sechium edule HOM05D004003 ORTHO05D004595 6.9e-72 274.2 169 80.5
Lsat_1_v5_gn_2_131500 Lactuca sativa HOM05D004003 ORTHO05D004595 9.0e-72 273.9 166 80.7
Lj2g0001989 Lotus japonicus HOM05D004003 ORTHO05D004595 1.2e-71 273.5 178 77.5
Gohir.A11G012800 Gossypium hirsutum HOM05D004003 ORTHO05D004595 1.5e-71 273.1 178 75.8
Lalb_Chr19g0130491 Lupinus albus HOM05D004003 ORTHO05D004595 2.0e-71 272.7 177 79.1
CiPaw.06G004300 Carya illinoinensis HOM05D004003 ORTHO05D004595 2.6e-71 272.3 167 79.0
Thhalv10026409m.g Eutrema salsugineum HOM05D004003 ORTHO05D004595 4.5e-71 271.6 178 75.8
Prupe.2G302600 Prunus persica HOM05D004003 ORTHO05D004595 5.8e-71 271.2 157 83.4
Sed0009881 Sechium edule HOM05D004003 ORTHO05D004595 5.8e-71 271.2 153 85.0
Hund13071 Selenicereus undatus HOM05D004003 ORTHO05D004595 9.9e-71 270.4 178 74.7
THA.LOC104800278 Tarenaya hassleriana HOM05D004003 ORTHO05D004595 9.9e-71 270.4 175 76.0
ECA232G1033 Erigeron canadensis HOM05D004003 ORTHO05D004595 1.3e-70 270.0 174 77.6
Gorai.008G273600 Gossypium raimondii HOM05D004003 ORTHO05D004595 1.3e-70 270.0 178 74.7
Lalb_Chr03g0034981 Lupinus albus HOM05D004003 ORTHO05D004595 1.3e-70 270.0 177 78.0
Manes.14G021000 Manihot esculenta HOM05D004003 ORTHO05D004595 1.3e-70 270.0 178 76.4
QL09p012375 Quercus lobata HOM05D004003 ORTHO05D004595 1.3e-70 270.0 178 75.8
Gorai.007G013400 Gossypium raimondii HOM05D004003 ORTHO05D004595 1.7e-70 269.6 175 77.1
Thhalv10014849m.g Eutrema salsugineum HOM05D004003 ORTHO05D004595 2.2e-70 269.2 178 75.3
arahy.Tifrunner.gnm1.ann1.SB31NP Arachis hypogaea HOM05D004003 ORTHO05D004595 2.9e-70 268.9 178 75.8
Dinv35269 Davidia involucrata HOM05D004003 ORTHO05D004595 2.9e-70 268.9 157 82.8
FvH4_7g30480 Fragaria vesca HOM05D004003 ORTHO05D004595 6.4e-70 267.7 165 79.4
FAN01G1512 Fragaria x ananassa HOM05D004003 ORTHO05D004595 6.4e-70 267.7 165 79.4
FAN06G3020 Fragaria x ananassa HOM05D004003 ORTHO05D004595 6.4e-70 267.7 165 79.4
FAN10G2159 Fragaria x ananassa HOM05D004003 ORTHO05D004595 6.4e-70 267.7 165 79.4
Gohir.D12G255500 Gossypium hirsutum HOM05D004003 ORTHO05D004595 6.4e-70 267.7 178 74.2
Gohir.D12G255550 Gossypium hirsutum HOM05D004003 ORTHO05D004595 6.4e-70 267.7 178 74.2
Sp7g25950 Schrenkiella parvula HOM05D004003 ORTHO05D004595 6.4e-70 267.7 178 74.7
PGR042G1718 Punica granatum HOM05D004003 ORTHO05D004595 8.4e-70 267.3 178 74.7
MD07G1280400 Malus domestica HOM05D004003 ORTHO05D004595 1.1e-69 266.9 157 81.5
THA.LOC104825117 Tarenaya hassleriana HOM05D004003 ORTHO05D004595 1.1e-69 266.9 172 76.7
FAN03G0349 Fragaria x ananassa HOM05D004003 ORTHO05D004595 1.4e-69 266.5 165 78.8
FAN03G2611 Fragaria x ananassa HOM05D004003 ORTHO05D004595 1.4e-69 266.5 165 78.8
RcHm_v2.0_Chr1g0378851 Rosa chinensis HOM05D004003 ORTHO05D004595 1.4e-69 266.5 157 80.9
MD01G1210300 Malus domestica HOM05D004003 ORTHO05D004595 1.9e-69 266.2 157 80.3
FAN06G1184 Fragaria x ananassa HOM05D004003 ORTHO05D004595 2.4e-69 265.8 165 78.8
Manes.06G153700 Manihot esculenta HOM05D004003 ORTHO05D004595 2.4e-69 265.8 167 78.4
VMungo0464G2050 Vigna mungo HOM05D004003 ORTHO05D004595 2.4e-69 265.8 169 77.5
AL8G27280 Arabidopsis lyrata HOM05D004003 ORTHO05D004595 3.2e-69 265.4 178 74.2
Ciclev10006072m.g Citrus clementina HOM05D004003 ORTHO05D004595 3.2e-69 265.4 178 74.2
arahy.Tifrunner.gnm1.ann1.R03NAB Arachis hypogaea HOM05D004003 ORTHO05D004595 4.2e-69 265.0 178 74.7
FAN10G2319 Fragaria x ananassa HOM05D004003 ORTHO05D004595 4.2e-69 265.0 165 78.8
Atru.chr1.335 Acer truncatum HOM05D004003 ORTHO05D004595 5.4e-69 264.6 178 74.2
CARHR265770 Cardamine hirsuta HOM05D004003 ORTHO05D004595 5.4e-69 264.6 176 75.0
GSVIVG01028820001 Vitis vinifera HOM05D004003 ORTHO05D004595 5.4e-69 264.6 178 74.2
BraA03t10847Z Brassica rapa HOM05D004003 ORTHO05D004595 7.1e-69 264.2 176 73.3
Ah.11g045360 Amaranthus hybridus HOM05D004003 ORTHO05D004595 9.3e-69 263.8 158 80.4
Carub.0008s1300 Capsella rubella HOM05D004003 ORTHO05D004595 9.3e-69 263.8 178 73.0
AUR62037745 Chenopodium quinoa HOM05D004003 ORTHO05D004595 9.3e-69 263.8 151 83.4
Glyma.09G129000 Glycine max HOM05D004003 ORTHO05D004595 9.3e-69 263.8 178 75.8
PSO017G3679 Papaver somniferum HOM05D004003 ORTHO05D004595 1.6e-68 263.1 158 80.4
ECA233G0998 Erigeron canadensis HOM05D004003 ORTHO05D004595 2.1e-68 262.7 175 76.0
Sp6g15000 Schrenkiella parvula HOM05D004003 ORTHO05D004595 2.1e-68 262.7 178 73.0
EL10Ac2g03211 Beta vulgaris HOM05D004003 ORTHO05D004595 2.7e-68 262.3 178 73.0
Gohir.A12G253200 Gossypium hirsutum HOM05D004003 ORTHO05D004595 2.7e-68 262.3 178 72.5
Phvul.004G105700 Phaseolus vulgaris HOM05D004003 ORTHO05D004595 2.7e-68 262.3 171 74.9
TWI23G0858 Tripterygium wilfordii HOM05D004003 ORTHO05D004595 2.7e-68 262.3 172 76.7
BcaC01g06202 Brassica carinata HOM05D004003 ORTHO05D004595 3.5e-68 261.9 167 76.0
A03p15550 Brassica napus HOM05D004003 ORTHO05D004595 3.5e-68 261.9 176 72.7
C03p18160 Brassica napus HOM05D004003 ORTHO05D004595 3.5e-68 261.9 167 76.0
BcaB01g04212 Brassica carinata HOM05D004003 ORTHO05D004595 4.6e-68 261.5 172 73.8
BcaB08g35638 Brassica carinata HOM05D004003 ORTHO05D004595 4.6e-68 261.5 166 74.7
BraA10t43109Z Brassica rapa HOM05D004003 ORTHO05D004595 4.6e-68 261.5 172 73.8
A02p11580 Brassica napus HOM05D004003 ORTHO05D004595 6.0e-68 261.2 174 73.6
BraA02t06220Z Brassica rapa HOM05D004003 ORTHO05D004595 6.0e-68 261.2 174 73.6
A10p10290 Brassica napus HOM05D004003 ORTHO05D004595 7.9e-68 260.8 172 73.8
vmacro06614 Vaccinium macrocarpon HOM05D004003 ORTHO05D004595 7.9e-68 260.8 230 60.0
Aa31LG3G9080 Aethionema arabicum HOM05D004003 ORTHO05D004595 1.0e-67 260.4 178 73.0
BolC3t14217H Brassica oleracea HOM05D004003 ORTHO05D004595 1.0e-67 260.4 176 72.2
BcaC04g20535 Brassica carinata HOM05D004003 ORTHO05D004595 1.8e-67 259.6 172 73.8
C09p42440 Brassica napus HOM05D004003 ORTHO05D004595 1.8e-67 259.6 172 73.8
PSO478G4828 Papaver somniferum HOM05D004003 ORTHO05D004595 2.3e-67 259.2 170 77.6
AT5G52840 Arabidopsis thaliana HOM05D004003 ORTHO05D004595 3.0e-67 258.8 178 71.9
TWI14G1326 Tripterygium wilfordii HOM05D004003 ORTHO05D004595 3.0e-67 258.8 175 74.9
Nn6g32413 Nelumbo nucifera HOM05D004003 ORTHO05D004595 5.1e-67 258.1 166 74.7
TAR629G0127 Trochodendron aralioides HOM05D004003 ORTHO05D004595 6.7e-67 257.7 151 82.1
Dinv28379 Davidia involucrata HOM05D004003 ORTHO05D004595 4.3e-66 255.0 148 83.8
BcaB05g21985 Brassica carinata HOM05D004003 ORTHO05D004595 5.6e-66 254.6 169 74.0
CANSAT21G1389 Cannabis sativa HOM05D004003 ORTHO05D004595 7.4e-66 254.2 157 75.8
CANSAT21G1446 Cannabis sativa HOM05D004003 ORTHO05D004595 7.4e-66 254.2 157 75.8
Psat5g299680 Pisum sativum HOM05D004003 ORTHO05D004595 4.8e-65 251.5 183 69.4
Potri.004G071900 Populus trichocarpa HOM05D004003 ORTHO05D004595 4.8e-65 251.5 178 70.8
Ca_20595_v3 Cicer arietinum L. HOM05D004003 ORTHO05D004595 8.1e-65 250.8 183 68.3
Psat0s1604g0040 Pisum sativum HOM05D004003 ORTHO05D004595 8.1e-65 250.8 183 69.4
TPR.G27150 Trifolium pratense HOM05D004003 ORTHO05D004595 8.1e-65 250.8 183 69.4
Sabra17G0124400 Salix brachista HOM05D004003 ORTHO05D004595 4.0e-64 248.4 174 70.7
Sabra04G0047300 Salix brachista HOM05D004003 ORTHO05D004595 2.0e-63 246.1 178 70.8
HPP92_001384 Vanilla planifolia HOM05D004003 ORTHO05D004595 2.0e-63 246.1 170 70.0
Medtr6g053280 Medicago truncatula HOM05D004003 ORTHO05D004595 4.5e-63 245.0 184 69.6
Potri.017G149100 Populus trichocarpa HOM05D004003 ORTHO05D004595 4.5e-63 245.0 178 69.1
C02p19300 Brassica napus HOM05D004003 ORTHO05D004595 1.0e-62 243.8 178 69.1
BolC2t08066H Brassica oleracea HOM05D004003 ORTHO05D004595 1.0e-62 243.8 178 69.1
CDE05G0545 Ceratophyllum demersum HOM05D004003 ORTHO05D004595 3.5e-60 235.3 173 69.9
CDE05G3305 Ceratophyllum demersum HOM05D004003 ORTHO05D004595 4.6e-60 235.0 173 68.8
Zm00001eb015010 Zea mays HOM05D004003 ORTHO05D004595 1.0e-59 233.8 157 70.7
Os03g0313000 Oryza sativa ssp. japonica HOM05D004003 ORTHO05D004595 3.0e-59 232.3 157 70.1
PSO478G1314 Papaver somniferum HOM05D004003 ORTHO05D004595 1.3e-57 226.9 142 77.5
ATR0721G154 Amborella trichopoda HOM05D004003 ORTHO05D004595 1.1e-56 223.8 146 71.2
AUR62042233 Chenopodium quinoa HOM05D004003 ORTHO05D004595 4.0e-56 221.9 151 72.8
Haze_00063 Corylus avellana HOM05D004003 ORTHO05D004595 9.3e-53 210.7 134 74.6
SEGI_14933 Sequoiadendron giganteum HOM05D004003 ORTHO05D004595 3.0e-51 205.7 144 66.0
MD00G1172600 Malus domestica HOM05D004003 ORTHO05D004595 3.3e-50 202.2 132 73.5
BolC9t57124H Brassica oleracea HOM05D004003 ORTHO05D004595 3.7e-49 198.7 172 59.9
TAR636G0624 Trochodendron aralioides HOM05D004003 ORTHO05D004595 3.7e-49 198.7 135 71.1
MD13G1261600 Malus domestica HOM05D004003 ORTHO05D004595 1.2e-44 183.7 111 75.7
AagrBONN_evm.TU.Sc2ySwM_344.4010 Anthoceros agrestis HOM05D004003 ORTHO05D004595 1.6e-44 183.3 136 64.7
Pp3c5_12290 Physcomitrium patens HOM05D004003 ORTHO05D004595 1.0e-43 180.6 136 63.2
HanXRQChr10g0304961 Helianthus annuus HOM05D004003 ORTHO05D004595 1.4e-43 180.3 108 86.1
vmacro09809 Vaccinium macrocarpon HOM05D004003 ORTHO05D004595 1.4e-43 180.3 149 56.4
Mapoly0111s0029 Marchantia polymorpha HOM05D004003 ORTHO05D004595 2.5e-42 176.0 136 61.0
Ah.10g032500 Amaranthus hybridus HOM05D004003 ORTHO05D004595 3.7e-41 172.2 151 60.3
CBR_g31069 Chara braunii HOM05D004003 ORTHO05D004595 3.7e-41 172.2 135 59.3
Zm00001eb395850 Zea mays HOM05D004003 ORTHO05D004595 1.0e-35 154.1 112 68.8
Thhalv10015894m.g Eutrema salsugineum HOM05D004003 ORTHO05D004595 1.4e-35 153.7 178 52.8
SMO119G0129 Selaginella moellendorffii HOM05D004003 ORTHO05D004595 1.4e-32 143.7 120 55.0
BcaC03g14495 Brassica carinata HOM05D004003 ORTHO05D004595 9.1e-32 141.0 90 80.0
CAN.G311.32 Capsicum annuum HOM05D005247 ORTHO05D006571 2.6e-31 139.4 105 71.4
RcHm_v2.0_Chr1g0362161 Rosa chinensis HOM05D004003 ORTHO05D004595 5.9e-31 138.3 88 80.7
Ah.03g141030 Amaranthus hybridus HOM05D004003 ORTHO05D004595 2.6e-26 122.9 99 60.6
Psat6g098040 Pisum sativum HOM05D000395 ORTHO05D004595 8.2e-25 117.9 96 63.5
ECA238G0868 Erigeron canadensis HOM05D004003 ORTHO05D004595 1.7e-22 110.2 174 36.2
ECA240G1980 Erigeron canadensis HOM05D004003 ORTHO05D004595 1.7e-22 110.2 124 42.7
ECA240G4361 Erigeron canadensis HOM05D004003 ORTHO05D004595 1.7e-22 110.2 124 42.7
ECA240G4047 Erigeron canadensis HOM05D004003 ORTHO05D004595 8.5e-22 107.8 120 40.8
Dinv24022 Davidia involucrata HOM05D004003 ORTHO05D004595 3.2e-21 105.9 71 70.4
CAN.G204.11 Capsicum annuum HOM05D004003 ORTHO05D004595 1.6e-20 103.6 56 78.6
AT4G28005 Arabidopsis thaliana HOM05D004003 ORTHO05D004595 3.6e-20 102.4 167 40.1
BcaC03g14494 Brassica carinata HOM05D004003 ORTHO05D004595 1.7e-17 93.6 74 58.1
COL.COLO4_06858 Corchorus olitorius HOM05D004003 ORTHO05D004595 2.8e-17 92.8 71 59.2
MCO01G593 Micromonas commoda HOM05D004003 ORTHO05D004595 6.3e-17 91.7 101 42.6
MCO01G594 Micromonas commoda HOM05D004003 ORTHO05D004595 6.3e-17 91.7 101 42.6
CAN.G640.19 Capsicum annuum HOM05D004003 ORTHO05D004595 3.1e-16 89.4 68 58.8
Rhsim03G0124900 Rhododendron simsii HOM05D004003 ORTHO05D004595 7.7e-15 84.7 55 72.7
Haze_26197 Corylus avellana HOM05D004003 ORTHO05D004595 3.8e-14 82.4 101 41.6
Cre13.g568800 Chlamydomonas reinhardtii HOM05D004003 ORTHO05D004595 6.1e-12 75.1 95 45.3
ATR0721G175 Amborella trichopoda HOM05D004003 ORTHO05D004595 8.8e-11 71.2 44 63.6
PRCOL_00006691 Prasinoderma coloniale HOM05D004003 ORTHO05D004595 6.6e-06 55.1 112 37.5


User provided reference genes

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