Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow2G3431 Salvia bowleyana HOM05D003500 ORTHO05D003919 5.4e-131 471.1 254 100.0
Migut.I00867 Erythranthe guttata HOM05D003500 ORTHO05D003919 5.6e-59 231.9 258 57.4
Migut.D01030 Erythranthe guttata HOM05D003500 ORTHO05D003919 4.0e-49 199.1 255 51.0
MSTRG.4733 Avicennia marina HOM05D003500 ORTHO05D003919 3.2e-46 189.5 260 49.6
SGA_v2.0_scaffold37G14827 Striga asiatica HOM05D003500 ORTHO05D003919 1.7e-44 183.7 265 46.8
Oeu000451.1 Olea europaea HOM05D003500 ORTHO05D003919 2.6e-40 169.9 290 44.1
SGA_v2.0_scaffold68G23002 Striga asiatica HOM05D003500 ORTHO05D003919 2.6e-40 169.9 258 47.3
SalBow2G0526 Salvia bowleyana HOM05D003500 ORTHO05D003919 1.6e-29 134.0 261 42.1
Dinv30507 Davidia involucrata HOM05D003500 ORTHO05D003919 1.0e-28 131.3 264 37.5
Cfa002069 Carpinus fangiana HOM05D003500 ORTHO05D003919 1.3e-28 131.0 255 41.2
Peaxi162Scf00015g10038 Petunia axillaris HOM05D003500 ORTHO05D003919 4.3e-27 125.9 173 46.2
vmacro18911 Vaccinium macrocarpon HOM05D003500 ORTHO05D003919 1.1e-25 121.3 285 33.3
Prupe.3G070800 Prunus persica HOM05D003500 ORTHO05D003919 1.8e-25 120.6 277 34.3
RcHm_v2.0_Chr2g0137891 Rosa chinensis HOM05D003500 ORTHO05D003919 5.2e-25 119.0 266 34.6
Haze_16428 Corylus avellana HOM05D003500 ORTHO05D003919 1.2e-24 117.9 276 36.6
Nitab4.5_0000671g0100 Nicotiana tabacum HOM05D003500 ORTHO05D003919 3.4e-24 116.3 190 43.2
PGR102G2146 Punica granatum HOM05D003500 ORTHO05D003919 3.4e-24 116.3 263 38.0
Potri.003G055200 Populus trichocarpa HOM05D003500 ORTHO05D003919 1.7e-23 114.0 279 35.5
Nitab4.5_0005851g0060 Nicotiana tabacum HOM05D003500 ORTHO05D003919 2.2e-23 113.6 190 41.6
FvH4_6g31220 Fragaria vesca HOM05D003500 ORTHO05D003919 2.9e-23 113.2 254 33.9
FAN14G5419 Fragaria x ananassa HOM05D003500 ORTHO05D003919 6.4e-23 112.1 250 34.0
Sc12g0009290 Simmondsia chinensis HOM05D003500 ORTHO05D003919 2.4e-22 110.2 259 36.3
CiPaw.01G239100 Carya illinoinensis HOM05D003500 ORTHO05D003919 5.4e-22 109.0 150 45.3
C06p07810 Brassica napus HOM05D003500 ORTHO05D003919 7.1e-22 108.6 259 33.2
CARHR042490 Cardamine hirsuta HOM05D003500 ORTHO05D003919 7.1e-22 108.6 261 34.9
BolC6t35867H Brassica oleracea HOM05D003500 ORTHO05D003919 9.3e-22 108.2 259 32.8
CsaV3_3G025090 Cucumis sativus L. HOM05D003500 ORTHO05D003919 1.2e-21 107.8 296 35.8
ClCG07G013080 Citrullus lanatus HOM05D003500 ORTHO05D003919 1.6e-21 107.5 302 33.8
THA.LOC104810618 Tarenaya hassleriana HOM05D003500 ORTHO05D003919 1.6e-21 107.5 259 35.5
Thecc.06G088400 Theobroma cacao HOM05D003500 ORTHO05D003919 2.1e-21 107.1 142 43.7
Ca_20390_v3 Cicer arietinum L. HOM05D003500 ORTHO05D003919 2.7e-21 106.7 252 34.9
Thhalv10012010m.g Eutrema salsugineum HOM05D003500 ORTHO05D003919 2.7e-21 106.7 253 34.4
MD17G1194800 Malus domestica HOM05D003500 ORTHO05D003919 3.5e-21 106.3 275 33.5
TWI18G0570 Tripterygium wilfordii HOM05D003500 ORTHO05D003919 6.0e-21 105.5 274 32.1
Rhsim08G0221500 Rhododendron simsii HOM05D003500 ORTHO05D003919 7.8e-21 105.1 216 35.6
A06p01860 Brassica napus HOM05D003500 ORTHO05D003919 1.3e-20 104.4 259 32.0
Duzib235G1266 Durio zibethinus HOM05D003500 ORTHO05D003919 1.7e-20 104.0 183 37.7
Solyc03g120180.3 Solanum lycopersicum HOM05D003500 ORTHO05D003919 1.7e-20 104.0 129 48.1
BraA06t23403Z Brassica rapa HOM05D003500 ORTHO05D003919 3.0e-20 103.2 262 33.2
Sed0015651 Sechium edule HOM05D003500 ORTHO05D003919 3.0e-20 103.2 291 33.3
Glyma.08G206700 Glycine max HOM05D003500 ORTHO05D003919 3.9e-20 102.8 309 30.4
Carub.0001s4135 Capsella rubella HOM05D003500 ORTHO05D003919 5.1e-20 102.4 267 33.3
Glyma.07G006100 Glycine max HOM05D003500 ORTHO05D003919 8.7e-20 101.7 302 30.8
QL12p026085 Quercus lobata HOM05D003500 ORTHO05D003919 8.7e-20 101.7 284 35.2
Actinidia32755 Actinidia chinensis HOM05D003500 ORTHO05D003919 1.9e-19 100.5 254 36.6
CANSAT56G2888 Cannabis sativa HOM05D003500 ORTHO05D003919 3.3e-19 99.8 131 45.0
Medtr4g012520 Medicago truncatula HOM05D003500 ORTHO05D003919 3.3e-19 99.8 291 30.6
Sp1g38960 Schrenkiella parvula HOM05D003500 ORTHO05D003919 3.3e-19 99.8 259 31.7
TAR624G1157 Trochodendron aralioides HOM05D003500 ORTHO05D003919 3.3e-19 99.8 299 34.4
unitig_899.g14777 Utricularia gibba HOM05D003500 ORTHO05D003919 3.3e-19 99.8 245 37.1
BcaC08g43415 Brassica carinata HOM05D003500 ORTHO05D003919 1.3e-18 97.8 245 31.8
Manes.11G047100 Manihot esculenta HOM05D003500 ORTHO05D003919 6.2e-18 95.5 274 33.2
QL05p023510 Quercus lobata HOM05D003500 ORTHO05D003919 8.1e-18 95.1 258 32.6
Lalb_Chr04g0262681 Lupinus albus HOM05D003500 ORTHO05D003919 1.1e-17 94.7 301 28.9
Sed0003187 Sechium edule HOM05D003500 ORTHO05D003919 1.8e-17 94.0 296 32.4
BcaB02g11002 Brassica carinata HOM05D003500 ORTHO05D003919 4.0e-17 92.8 245 31.4
COL.COLO4_30382 Corchorus olitorius HOM05D003500 ORTHO05D003919 4.0e-17 92.8 235 31.9
Eucgr.F03015 Eucalyptus grandis HOM05D003500 ORTHO05D003919 4.0e-17 92.8 255 36.1
Gorai.002G059400 Gossypium raimondii HOM05D003500 ORTHO05D003919 1.5e-16 90.9 152 38.8
Gorai.001G029300 Gossypium raimondii HOM05D003500 ORTHO05D003919 2.6e-16 90.1 261 30.7
Gohir.D03G063800 Gossypium hirsutum HOM05D003500 ORTHO05D003919 4.5e-16 89.4 130 42.3
VMungo0331G1412 Vigna mungo HOM05D003500 ORTHO05D003919 5.8e-16 89.0 303 30.0
Psat7g252240 Pisum sativum HOM05D003500 ORTHO05D003919 1.3e-15 87.8 291 30.2
Ciclev10027012m.g Citrus clementina HOM05D003500 ORTHO05D003919 1.7e-15 87.4 282 32.6
Eucgr.C02880 Eucalyptus grandis HOM05D003500 ORTHO05D003919 2.9e-15 86.7 294 30.3
AT1G52343 Arabidopsis thaliana HOM05D003500 ORTHO05D003919 8.4e-15 85.1 255 29.4
Gohir.A02G121400 Gossypium hirsutum HOM05D003500 ORTHO05D003919 8.4e-15 85.1 192 31.8
TWI32G0121 Tripterygium wilfordii HOM05D003500 ORTHO05D003919 1.1e-14 84.7 276 30.4
Gohir.A07G024400 Gossypium hirsutum HOM05D003500 ORTHO05D003919 1.9e-14 84.0 285 30.9
ClCG08G012430 Citrullus lanatus HOM05D003500 ORTHO05D003919 2.4e-14 83.6 285 30.5
Gohir.D07G028000 Gossypium hirsutum HOM05D003500 ORTHO05D003919 2.4e-14 83.6 291 29.2
Lalb_Chr01g0012691 Lupinus albus HOM05D003500 ORTHO05D003919 3.2e-14 83.2 178 33.1
RcHm_v2.0_Chr6g0305551 Rosa chinensis HOM05D003500 ORTHO05D003919 3.2e-14 83.2 255 29.0
CSS0016282 Camellia sinensis var. sinensis HOM05D003500 ORTHO05D003919 4.2e-14 82.8 101 49.5
CSS0048346 Camellia sinensis var. sinensis HOM05D003500 ORTHO05D003919 4.2e-14 82.8 101 49.5
CiPaw.07G208500 Carya illinoinensis HOM05D003500 ORTHO05D003919 4.2e-14 82.8 287 29.3
HanXRQChr01g0029371 Helianthus annuus HOM05D003500 ORTHO05D003919 9.3e-14 81.6 257 27.6
DCAR_003060 Daucus carota HOM05D003500 ORTHO05D003919 1.2e-13 81.3 274 28.5
Dinv14210 Davidia involucrata HOM05D003500 ORTHO05D003919 1.2e-13 81.3 297 29.0
Thecc.09G037900 Theobroma cacao HOM05D003500 ORTHO05D003919 1.2e-13 81.3 288 28.8
PSO063G0209 Papaver somniferum HOM05D003500 ORTHO05D003919 2.7e-13 80.1 169 37.3
PSO782G3147 Papaver somniferum HOM05D003500 ORTHO05D003919 2.7e-13 80.1 169 37.9
PGR044G1892 Punica granatum HOM05D003500 ORTHO05D003919 2.7e-13 80.1 286 30.8
TAR636G0685 Trochodendron aralioides HOM05D003500 ORTHO05D003919 2.7e-13 80.1 266 32.7
arahy.Tifrunner.gnm1.ann1.V41S3G Arachis hypogaea HOM05D003500 ORTHO05D003919 3.5e-13 79.7 279 31.2
Duzib168G0612 Durio zibethinus HOM05D003500 ORTHO05D003919 3.5e-13 79.7 302 28.8
Lj8A606T22 Lonicera japonica HOM05D003500 ORTHO05D003919 4.6e-13 79.3 281 32.7
Sabra18G0036300 Salix brachista HOM05D003500 ORTHO05D003919 6.0e-13 79.0 273 29.7
AL1G60570 Arabidopsis lyrata HOM05D003500 ORTHO05D003919 7.9e-13 78.6 241 29.5
Potri.018G035800 Populus trichocarpa HOM05D003500 ORTHO05D003919 7.9e-13 78.6 272 29.4
Cfa013328 Carpinus fangiana HOM05D003500 ORTHO05D003919 1.3e-12 77.8 285 30.2
Lj3g0021763 Lotus japonicus HOM05D003500 ORTHO05D003919 1.3e-12 77.8 289 29.4
arahy.Tifrunner.gnm1.ann1.Y86J0E Arachis hypogaea HOM05D003500 ORTHO05D003919 1.8e-12 77.4 298 29.2
Haze_21819 Corylus avellana HOM05D003500 ORTHO05D003919 1.8e-12 77.4 290 29.0
Lalb_Chr03g0029341 Lupinus albus HOM05D003500 ORTHO05D003919 3.0e-12 76.6 271 29.2
Manes.16G069800 Manihot esculenta HOM05D003500 ORTHO05D003919 3.0e-12 76.6 287 30.3
Atru.chr7.2303 Acer truncatum HOM05D003500 ORTHO05D003919 3.9e-12 76.3 173 32.9
Ciclev10009124m.g Citrus clementina HOM05D003500 ORTHO05D003919 3.9e-12 76.3 287 26.5
HPP92_005532 Vanilla planifolia HOM05D003500 ORTHO05D003919 3.9e-12 76.3 283 29.3
MELO3C012963.2 Cucumis melo HOM05D003500 ORTHO05D003919 6.7e-12 75.5 270 31.9
CsaV3_2G031120 Cucumis sativus L. HOM05D003500 ORTHO05D003919 8.7e-12 75.1 287 30.3
MD15G1099900 Malus domestica HOM05D003500 ORTHO05D003919 1.9e-11 73.9 294 30.3
FAN20G2191 Fragaria x ananassa HOM05D003500 ORTHO05D003919 2.5e-11 73.6 266 30.1
GSVIVG01035753001 Vitis vinifera HOM05D003500 ORTHO05D003919 2.5e-11 73.6 298 28.2
BraA08t33760Z Brassica rapa HOM05D003500 ORTHO05D003919 3.3e-11 73.2 275 27.6
CSS0048332 Camellia sinensis var. sinensis HOM05D003500 ORTHO05D003919 3.3e-11 73.2 297 27.9
Lsat_1_v5_gn_1_49081 Lactuca sativa HOM05D003500 ORTHO05D003919 3.3e-11 73.2 264 29.5
Phvul.010G150500 Phaseolus vulgaris HOM05D003500 ORTHO05D003919 5.6e-11 72.4 320 25.9
Migut.E01507 Erythranthe guttata HOM05D003500 ORTHO05D003919 7.4e-11 72.0 263 27.0
Oeu014656.1 Olea europaea HOM05D003500 ORTHO05D003919 7.4e-11 72.0 178 31.5
MSTRG.14007 Avicennia marina HOM05D003500 ORTHO05D003919 9.6e-11 71.6 292 28.4
Hma1.2p1_0140F.1_g063720 Hydrangea macrophylla HOM05D003500 ORTHO05D003919 9.6e-11 71.6 292 30.8
Aqoxy7G01735 Aquilegia oxysepala HOM05D003500 ORTHO05D003919 1.3e-10 71.2 311 28.3
MELO3C011162.2 Cucumis melo HOM05D003500 ORTHO05D003919 1.3e-10 71.2 290 29.7
Dinv30238 Davidia involucrata HOM05D003500 ORTHO05D003919 1.3e-10 71.2 156 32.7
arahy.Tifrunner.gnm1.ann1.AD7SDK Arachis hypogaea HOM05D003500 ORTHO05D003919 1.6e-10 70.9 291 28.2
Duzib187G1538 Durio zibethinus HOM05D003500 ORTHO05D003919 1.6e-10 70.9 296 27.7
EL10Ac2g02525 Beta vulgaris HOM05D003500 ORTHO05D003919 2.1e-10 70.5 260 29.2
BcaC01g01007 Brassica carinata HOM05D003500 ORTHO05D003919 2.1e-10 70.5 254 29.1
Prupe.1G454700 Prunus persica HOM05D003500 ORTHO05D003919 2.1e-10 70.5 266 30.5
VMungo1127G1234 Vigna mungo HOM05D003500 ORTHO05D003919 2.1e-10 70.5 263 25.9
Actinidia15719 Actinidia chinensis HOM05D003500 ORTHO05D003919 2.8e-10 70.1 278 28.8
SGA_v2.0_scaffold169G38640 Striga asiatica HOM05D003500 ORTHO05D003919 2.8e-10 70.1 262 27.5
Sc09g0008940 Simmondsia chinensis HOM05D003500 ORTHO05D003919 3.6e-10 69.7 271 27.3
TPR.G31013 Trifolium pratense HOM05D003500 ORTHO05D003919 3.6e-10 69.7 251 26.3
AUR62032393 Chenopodium quinoa HOM05D003500 ORTHO05D003919 4.8e-10 69.3 274 28.5
Rhsim07G0154900 Rhododendron simsii HOM05D003500 ORTHO05D003919 4.8e-10 69.3 284 28.2
ECA248G2427 Erigeron canadensis HOM05D002222 ORTHO05D002354 6.2e-10 68.9 150 30.7
AL7G19060 Arabidopsis lyrata HOM05D003500 ORTHO05D003919 8.1e-10 68.6 274 26.3
FAN27G2449 Fragaria x ananassa HOM05D003500 ORTHO05D003919 8.1e-10 68.6 266 29.3
C03p87180 Brassica napus HOM05D003500 ORTHO05D003919 1.1e-09 68.2 266 27.4
BolC3t21020H Brassica oleracea HOM05D003500 ORTHO05D003919 1.1e-09 68.2 266 27.4
BcaB03g12755 Brassica carinata HOM05D003500 ORTHO05D003919 1.4e-09 67.8 275 28.4
FvH4_2g36330 Fragaria vesca HOM05D003500 ORTHO05D003919 1.4e-09 67.8 259 28.6
Glyma.12G113900 Glycine max HOM05D003500 ORTHO05D003919 1.4e-09 67.8 251 25.9
Actinidia14650 Actinidia chinensis HOM05D003500 ORTHO05D003919 1.8e-09 67.4 297 29.6
TPR.G21779 Trifolium pratense HOM05D003500 ORTHO05D003919 1.8e-09 67.4 268 25.7
CANSAT35G1218 Cannabis sativa HOM05D003500 ORTHO05D003919 2.4e-09 67.0 288 29.5
Manes.04G123600 Manihot esculenta HOM05D003500 ORTHO05D003919 2.4e-09 67.0 244 32.0
Solyc08g068060.3 Solanum lycopersicum HOM05D003500 ORTHO05D003919 2.4e-09 67.0 281 28.8
A01p05660 Brassica napus HOM05D003500 ORTHO05D003919 3.1e-09 66.6 274 28.8
vmacro05351 Vaccinium macrocarpon HOM05D003500 ORTHO05D003919 5.3e-09 65.9 270 29.6
BolC1t00621H Brassica oleracea HOM05D003500 ORTHO05D003919 9.0e-09 65.1 270 28.5
BraA01t00536Z Brassica rapa HOM05D003500 ORTHO05D003919 9.0e-09 65.1 276 27.9
arahy.Tifrunner.gnm1.ann1.HR3BJH Arachis hypogaea HOM05D003500 ORTHO05D003919 1.5e-08 64.3 278 30.6
CARHR240660 Cardamine hirsuta HOM05D003500 ORTHO05D003919 1.5e-08 64.3 268 28.4
Ca_26668_v3 Cicer arietinum L. HOM05D003500 ORTHO05D003919 1.5e-08 64.3 266 28.2
PGSC0003DMG400014491 Solanum tuberosum HOM05D003500 ORTHO05D003919 2.0e-08 63.9 285 29.1
Carub.0007s0785 Capsella rubella HOM05D003500 ORTHO05D003919 2.6e-08 63.5 276 26.8
CAN.G886.10 Capsicum annuum HOM05D003500 ORTHO05D003919 2.6e-08 63.5 288 27.4
Nitab4.5_0002393g0050 Nicotiana tabacum HOM05D003500 ORTHO05D003919 2.6e-08 63.5 286 27.3
Sabra03G0031200 Salix brachista HOM05D003500 ORTHO05D003919 2.6e-08 63.5 99 43.4
Ah.10g025530 Amaranthus hybridus HOM05D003500 ORTHO05D003919 3.4e-08 63.2 272 26.1
AUR62024822 Chenopodium quinoa HOM05D003500 ORTHO05D003919 3.4e-08 63.2 275 28.0
Sp7g30440 Schrenkiella parvula HOM05D003500 ORTHO05D003919 3.4e-08 63.2 279 28.3
Medtr6g007370 Medicago truncatula HOM05D003500 ORTHO05D003919 4.5e-08 62.8 255 26.7
Medtr7g446310 Medicago truncatula HOM05D003500 ORTHO05D003919 4.5e-08 62.8 255 26.7
Psat7g063400 Pisum sativum HOM05D003500 ORTHO05D003919 5.8e-08 62.4 265 26.0
Sopen08g021950 Solanum pennellii HOM05D003500 ORTHO05D003919 5.8e-08 62.4 285 28.4
SHI10927 Sapria himalayana HOM05D003500 ORTHO05D003919 9.9e-08 61.6 171 28.7
BcaC09g52062 Brassica carinata HOM05D003500 ORTHO05D003919 2.9e-07 60.1 280 28.2
Phvul.011G117800 Phaseolus vulgaris HOM05D003500 ORTHO05D003919 3.8e-07 59.7 261 24.5
Hund25650 Selenicereus undatus HOM05D003500 ORTHO05D003919 6.4e-07 58.9 260 23.5
A08p18080 Brassica napus HOM05D003500 ORTHO05D003919 1.1e-06 58.2 169 29.6
ECA233G0641 Erigeron canadensis HOM05D003500 ORTHO05D003919 1.1e-06 58.2 256 23.4
Sed0000644 Sechium edule HOM05D003500 ORTHO05D003919 1.1e-06 58.2 166 33.1
THA.LOC104818564 Tarenaya hassleriana HOM05D003500 ORTHO05D003919 3.2e-06 56.6 279 26.9
unitig_32.g11118 Utricularia gibba HOM05D003500 ORTHO05D003919 7.1e-06 55.5 284 25.0
Cc08_g08590 Coffea canephora HOM05D003500 ORTHO05D003919 9.3e-06 55.1 271 25.8
Thhalv10025931m.g Eutrema salsugineum HOM05D003500 ORTHO05D003919 9.3e-06 55.1 280 27.9


User provided reference genes

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