Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow2G3316 Salvia bowleyana HOM05D001860 ORTHO05D004922 1.0e-176 623.2 307 100.0
MSTRG.7790 Avicennia marina HOM05D001860 ORTHO05D004922 4.3e-114 415.2 326 65.6
SGA_v2.0_scaffold172G38956 Striga asiatica HOM05D001860 ORTHO05D004922 1.7e-110 403.3 320 63.8
Oeu028270.1 Olea europaea HOM05D001860 ORTHO05D004922 3.5e-108 395.6 317 64.7
Migut.L01273 Erythranthe guttata HOM05D001860 ORTHO05D004922 1.2e-103 380.6 222 83.8
Solyc06g084030.3 Solanum lycopersicum HOM05D001860 ORTHO05D004922 2.7e-100 369.4 302 60.6
Sopen06g035410 Solanum pennellii HOM05D001860 ORTHO05D004922 3.5e-100 369.0 302 60.9
CAN.G771.16 Capsicum annuum HOM05D001860 ORTHO05D004922 6.6e-99 364.8 261 67.0
Hma1.2p1_1079F.1_g254970 Hydrangea macrophylla HOM05D001860 ORTHO05D004922 2.5e-98 362.8 261 68.6
Atru.chr11.1760 Acer truncatum HOM05D001860 ORTHO05D004922 5.6e-98 361.7 257 68.5
FAN12G1253 Fragaria x ananassa HOM05D001860 ORTHO05D004922 9.6e-98 360.9 294 62.2
Lj3A1035T53 Lonicera japonica HOM05D001860 ORTHO05D004922 8.1e-97 357.8 222 76.6
Ciclev10032245m.g Citrus clementina HOM05D001860 ORTHO05D004922 2.4e-96 356.3 296 59.5
PGSC0003DMG400020063 Solanum tuberosum HOM05D001860 ORTHO05D004922 2.0e-95 353.2 243 70.4
FAN22G1600 Fragaria x ananassa HOM05D001860 ORTHO05D004922 2.6e-95 352.8 304 58.6
Haze_11992 Corylus avellana HOM05D001860 ORTHO05D004922 4.5e-95 352.1 287 61.7
QL03p068521 Quercus lobata HOM05D001860 ORTHO05D004922 4.5e-95 352.1 265 63.8
RcHm_v2.0_Chr4g0439511 Rosa chinensis HOM05D001860 ORTHO05D004922 5.8e-95 351.7 301 59.8
FAN07G2810 Fragaria x ananassa HOM05D001860 ORTHO05D004922 7.6e-95 351.3 302 59.3
GSVIVG01019959001 Vitis vinifera HOM05D001860 ORTHO05D004922 7.6e-95 351.3 258 66.7
CiPaw.06G086900 Carya illinoinensis HOM05D001860 ORTHO05D004922 9.9e-95 350.9 280 62.1
Cfa008963 Carpinus fangiana HOM05D001860 ORTHO05D004922 2.2e-94 349.7 278 62.9
Nn3g17288 Nelumbo nucifera HOM05D001860 ORTHO05D004922 6.4e-94 348.2 269 63.6
Rhsim12G0064600 Rhododendron simsii HOM05D001860 ORTHO05D004922 6.4e-94 348.2 264 65.2
Aqoxy5G04114 Aquilegia oxysepala HOM05D001860 ORTHO05D004922 8.4e-94 347.8 264 64.0
CSS0022995 Camellia sinensis var. sinensis HOM05D001860 ORTHO05D004922 1.4e-93 347.1 278 60.8
Duzib248G0566 Durio zibethinus HOM05D001860 ORTHO05D004922 2.4e-93 346.3 257 67.3
Actinidia31905 Actinidia chinensis HOM05D001860 ORTHO05D004922 5.4e-93 345.1 258 65.1
Potri.008G088500 Populus trichocarpa HOM05D001860 ORTHO05D004922 5.4e-93 345.1 272 63.2
HanXRQChr17g0545281 Helianthus annuus HOM05D001860 ORTHO05D004922 7.1e-93 344.7 285 61.1
Thecc.02G343500 Theobroma cacao HOM05D001860 ORTHO05D004922 1.2e-92 344.0 257 66.9
TWI31G0055 Tripterygium wilfordii HOM05D001860 ORTHO05D004922 1.2e-92 344.0 258 63.2
TAR629G3174 Trochodendron aralioides HOM05D001860 ORTHO05D004922 2.1e-92 343.2 298 60.1
ECA246G1483 Erigeron canadensis HOM05D001860 ORTHO05D004922 2.7e-92 342.8 271 62.4
FvH4_4g31120 Fragaria vesca HOM05D001860 ORTHO05D004922 2.7e-92 342.8 295 60.7
Peaxi162Scf01530g00038 Petunia axillaris HOM05D001860 ORTHO05D004922 6.0e-92 341.7 222 72.5
Nitab4.5_0006433g0040 Nicotiana tabacum HOM05D001860 ORTHO05D004922 1.0e-91 340.9 219 72.1
vmacro01268 Vaccinium macrocarpon HOM05D001860 ORTHO05D004922 1.3e-91 340.5 305 57.7
CANSAT64G2732 Cannabis sativa HOM05D001860 ORTHO05D004922 1.7e-91 340.1 258 66.3
QL03p068503 Quercus lobata HOM05D001860 ORTHO05D004922 1.7e-91 340.1 255 63.9
Manes.05G104100 Manihot esculenta HOM05D001860 ORTHO05D004922 2.3e-91 339.7 299 59.5
Nitab4.5_0001044g0130 Nicotiana tabacum HOM05D001860 ORTHO05D004922 2.3e-91 339.7 235 68.1
Lsat_1_v5_gn_3_52040 Lactuca sativa HOM05D001860 ORTHO05D004922 3.9e-91 339.0 256 65.2
MELO3C012111.2 Cucumis melo HOM05D001860 ORTHO05D004922 1.1e-90 337.4 311 55.9
CsaV3_5G032890 Cucumis sativus L. HOM05D001860 ORTHO05D004922 1.5e-90 337.0 258 62.0
Gorai.013G087000 Gossypium raimondii HOM05D001860 ORTHO05D004922 2.5e-90 336.3 259 63.3
Phvul.002G083300 Phaseolus vulgaris HOM05D001860 ORTHO05D004922 4.3e-90 335.5 257 64.2
QL03p068489 Quercus lobata HOM05D001860 ORTHO05D004922 1.3e-89 334.0 264 62.1
Cc11_g12800 Coffea canephora HOM05D001860 ORTHO05D004922 1.6e-89 333.6 315 58.4
CsaV3_5G032900 Cucumis sativus L. HOM05D001860 ORTHO05D004922 2.8e-89 332.8 311 55.3
Eucgr.B03211 Eucalyptus grandis HOM05D001860 ORTHO05D004922 2.8e-89 332.8 291 58.8
Glyma.02G109300 Glycine max HOM05D001860 ORTHO05D004922 2.8e-89 332.8 256 63.3
Lj2g0002858 Lotus japonicus HOM05D001860 ORTHO05D004922 3.6e-89 332.4 257 61.9
DCAR_026253 Daucus carota HOM05D001016 ORTHO05D003396 2.4e-88 329.7 283 61.1
unitig_26.g10298 Utricularia gibba HOM05D001860 ORTHO05D004922 9.0e-88 327.8 303 56.4
ClCG05G024130 Citrullus lanatus HOM05D001860 ORTHO05D004922 1.5e-87 327.0 250 62.8
MBI05_g10765_MAGBIO Magnolia biondii HOM05D001860 ORTHO05D004922 2.6e-87 326.2 273 59.7
Sed0020595 Sechium edule HOM05D001860 ORTHO05D004922 7.6e-87 324.7 260 62.3
MD16G1070300 Malus domestica HOM05D001860 ORTHO05D004922 2.2e-86 323.2 313 55.0
Ca_04822_v3 Cicer arietinum L. HOM05D001860 ORTHO05D004922 8.4e-86 321.2 258 60.1
EL10Ac6g13236 Beta vulgaris HOM05D001860 ORTHO05D004922 1.4e-85 320.5 255 62.7
COL.COLO4_22943 Corchorus olitorius HOM05D001860 ORTHO05D004922 1.4e-85 320.5 280 58.2
Medtr5g041780 Medicago truncatula HOM05D001860 ORTHO05D004922 1.4e-85 320.5 260 60.0
Hund25222 Selenicereus undatus HOM05D001860 ORTHO05D004922 1.9e-85 320.1 258 61.2
arahy.Tifrunner.gnm1.ann1.0UW6S5 Arachis hypogaea HOM05D001860 ORTHO05D004922 2.7e-84 316.2 302 54.0
Os02g0744100 Oryza sativa ssp. japonica HOM05D001860 ORTHO05D004922 2.7e-84 316.2 255 59.6
Psat2g116760 Pisum sativum HOM05D001860 ORTHO05D004922 1.0e-83 314.3 256 58.2
Lalb_Chr04g0255941 Lupinus albus HOM05D001860 ORTHO05D004922 3.0e-83 312.8 363 47.7
ATR0564G196 Amborella trichopoda HOM05D001860 ORTHO05D004922 4.3e-82 308.9 291 56.4
PSO478G0757 Papaver somniferum HOM05D001860 ORTHO05D004922 5.6e-82 308.5 263 58.6
MELO3C012110.2 Cucumis melo HOM05D001860 ORTHO05D004922 2.8e-81 306.2 286 54.5
PSO017G0798 Papaver somniferum HOM05D001860 ORTHO05D004922 6.2e-81 305.1 308 51.0
Zm00001eb194590 Zea mays HOM05D001860 ORTHO05D004922 6.2e-81 305.1 255 58.8
AUR62032811 Chenopodium quinoa HOM05D001860 ORTHO05D004922 1.4e-80 303.9 239 60.7
C06p40330 Brassica napus HOM05D001860 ORTHO05D004922 2.4e-80 303.1 299 53.8
Sabra08G0066100 Salix brachista HOM05D001860 ORTHO05D004922 2.4e-80 303.1 352 48.6
Aa31LG4G11250 Aethionema arabicum HOM05D001860 ORTHO05D004922 3.1e-80 302.8 281 54.8
arahy.Tifrunner.gnm1.ann1.WF3EDY Arachis hypogaea HOM05D001860 ORTHO05D004922 3.1e-80 302.8 294 52.4
arahy.Tifrunner.gnm1.ann1.F2WL4X Arachis hypogaea HOM05D001860 ORTHO05D004922 6.9e-80 301.6 294 52.4
AT1G69523 Arabidopsis thaliana HOM05D001860 ORTHO05D004922 1.2e-79 300.8 256 57.0
vmacro01267 Vaccinium macrocarpon HOM05D001860 ORTHO05D004922 4.5e-79 298.9 386 45.3
BcaC08g46392 Brassica carinata HOM05D001860 ORTHO05D004922 1.0e-78 297.7 294 53.4
BcaB03g14715 Brassica carinata HOM05D001860 ORTHO05D004922 1.3e-78 297.4 256 55.9
HPP92_016837 Vanilla planifolia HOM05D001860 ORTHO05D004922 2.2e-78 296.6 261 57.5
TPR.G36138 Trifolium pratense HOM05D001860 ORTHO05D004922 2.9e-78 296.2 220 62.7
A07p35850 Brassica napus HOM05D001860 ORTHO05D004922 3.8e-78 295.8 298 52.3
Carub.0002s1616 Capsella rubella HOM05D001860 ORTHO05D004922 3.8e-78 295.8 305 50.5
BraA07t30786Z Brassica rapa HOM05D001860 ORTHO05D004922 4.9e-78 295.4 260 59.2
CDE04G1474 Ceratophyllum demersum HOM05D001860 ORTHO05D004922 8.4e-78 294.7 263 54.4
BolC6t39399H Brassica oleracea HOM05D001860 ORTHO05D004922 1.1e-77 294.3 297 52.2
Carub.0002s1617 Capsella rubella HOM05D001860 ORTHO05D004922 1.1e-77 294.3 269 57.2
C06p40340 Brassica napus HOM05D001860 ORTHO05D004922 2.5e-77 293.1 257 56.0
Thhalv10018913m.g Eutrema salsugineum HOM05D001860 ORTHO05D004922 2.5e-77 293.1 271 55.4
BolC6t39396H Brassica oleracea HOM05D001860 ORTHO05D004922 3.2e-77 292.7 257 56.0
BolC6t39398H Brassica oleracea HOM05D001860 ORTHO05D004922 3.2e-77 292.7 257 56.0
SEGI_35280 Sequoiadendron giganteum HOM05D001860 ORTHO05D004922 5.5e-77 292.0 266 54.1
THA.LOC104822044 Tarenaya hassleriana HOM05D001860 ORTHO05D004922 7.1e-77 291.6 300 51.3
Sp5g24630 Schrenkiella parvula HOM05D001860 ORTHO05D004922 1.2e-76 290.8 254 55.1
BcaB03g15478 Brassica carinata HOM05D001860 ORTHO05D004922 3.5e-76 289.3 269 56.1
A07p35830 Brassica napus HOM05D001860 ORTHO05D004922 1.3e-75 287.3 261 55.2
BraA07t31169Z Brassica rapa HOM05D001860 ORTHO05D004922 1.3e-75 287.3 261 55.2
A07p35840 Brassica napus HOM05D001860 ORTHO05D004922 1.8e-75 287.0 261 55.2
BraA07t31170Z Brassica rapa HOM05D001860 ORTHO05D004922 1.8e-75 287.0 261 55.2
Sp5g24640 Schrenkiella parvula HOM05D001860 ORTHO05D004922 1.8e-75 287.0 272 55.5
BcaB03g14720 Brassica carinata HOM05D001860 ORTHO05D004922 5.1e-75 285.4 293 51.5
AT1G69526 Arabidopsis thaliana HOM05D001860 ORTHO05D004922 6.7e-75 285.0 268 54.9
FAN17G3114 Fragaria x ananassa HOM05D001860 ORTHO05D004922 1.5e-74 283.9 302 52.3
AL2G28650 Arabidopsis lyrata HOM05D001860 ORTHO05D004922 3.3e-74 282.7 271 53.1
CDE06G2440 Ceratophyllum demersum HOM05D001860 ORTHO05D004922 3.3e-74 282.7 233 57.5
BraA07t31171Z Brassica rapa HOM05D001860 ORTHO05D004922 2.1e-73 280.0 290 51.0
Carub.0002s1615 Capsella rubella HOM05D001860 ORTHO05D004922 2.8e-73 279.6 283 49.8
BcaC08g46390 Brassica carinata HOM05D001860 ORTHO05D004922 2.4e-72 276.6 228 57.9
CARHR062460 Cardamine hirsuta HOM05D001860 ORTHO05D004922 3.4e-71 272.7 285 51.2
THA.LOC104822045 Tarenaya hassleriana HOM05D001860 ORTHO05D004922 5.9e-71 271.9 283 51.2
C06p40360 Brassica napus HOM05D001860 ORTHO05D004922 6.5e-70 268.5 220 58.6
THA.LOC104822184 Tarenaya hassleriana HOM05D001860 ORTHO05D004922 1.1e-69 267.7 223 58.3
Gohir.D13G076400 Gossypium hirsutum HOM05D001860 ORTHO05D004922 7.9e-68 261.5 195 63.6
Prupe.1G276900 Prunus persica HOM05D001860 ORTHO05D004922 1.8e-67 260.4 250 55.6
Gohir.A13G076700 Gossypium hirsutum HOM05D001860 ORTHO05D004922 2.3e-67 260.0 195 63.6
Pp3c24_6910 Physcomitrium patens HOM05D001860 ORTHO05D004922 7.4e-66 255.0 216 58.8
AagrBONN_evm.TU.Sc2ySwM_368.914 Anthoceros agrestis HOM05D001860 ORTHO05D004922 4.8e-65 252.3 256 50.8
CARHR062480 Cardamine hirsuta HOM05D001860 ORTHO05D004922 8.2e-65 251.5 200 63.0
SMO239G0167 Selaginella moellendorffii HOM05D001860 ORTHO05D004922 5.3e-64 248.8 266 50.0
PGR102G3336 Punica granatum HOM05D001860 ORTHO05D004922 2.1e-60 236.9 242 50.8
Mapoly0002s0191 Marchantia polymorpha HOM05D001860 ORTHO05D004922 7.9e-60 235.0 280 46.1
AL2G28640 Arabidopsis lyrata HOM05D001860 ORTHO05D004922 3.7e-57 226.1 217 53.0
BraA07t31168Z Brassica rapa HOM05D001482 ORTHO05D001499 5.3e-56 222.2 218 52.3
BcaC08g46388 Brassica carinata HOM05D001860 ORTHO05D004922 9.1e-56 221.5 206 54.4
Carub.0002s1614 Capsella rubella HOM05D001860 ORTHO05D004922 9.1e-56 221.5 218 52.8
A07p35820 Brassica napus HOM05D001482 ORTHO05D001499 1.5e-55 220.7 218 51.8
BolC6t39394H Brassica oleracea HOM05D001482 ORTHO05D001499 7.7e-55 218.4 206 54.4
CARHR062450 Cardamine hirsuta HOM05D001860 ORTHO05D004922 7.7e-55 218.4 218 51.8
Sp5g24610 Schrenkiella parvula HOM05D001860 ORTHO05D004922 7.7e-55 218.4 215 53.0
BcaB03g14714 Brassica carinata HOM05D001860 ORTHO05D004922 5.0e-54 215.7 206 53.4
AT1G69520 Arabidopsis thaliana HOM05D001860 ORTHO05D004922 2.5e-53 213.4 210 51.9
Thhalv10019583m.g Eutrema salsugineum HOM05D001860 ORTHO05D004922 1.2e-52 211.1 206 51.9
CSS0019961 Camellia sinensis var. sinensis HOM05D001860 ORTHO05D004922 1.6e-52 210.7 161 61.5
Ah.02g129590 Amaranthus hybridus HOM05D001860 ORTHO05D004922 1.8e-51 207.2 316 40.8
Sc11g0002060 Simmondsia chinensis HOM05D001860 ORTHO05D004922 2.2e-49 200.3 168 60.7
C06p40380 Brassica napus HOM05D001482 ORTHO05D001499 7.0e-48 195.3 228 47.4
Oeu028272.1 Olea europaea HOM05D001860 ORTHO05D004922 1.6e-47 194.1 126 74.6
AUR62005816 Chenopodium quinoa HOM05D001860 ORTHO05D004922 5.5e-45 185.7 139 64.7
BcaB03g14717 Brassica carinata HOM05D001860 ORTHO05D004922 1.6e-44 184.1 167 53.9
SMO137G0248 Selaginella moellendorffii HOM05D001860 ORTHO05D004922 2.1e-44 183.7 204 44.1
Dinv16666 Davidia involucrata HOM05D001860 ORTHO05D004922 8.8e-43 178.3 144 59.0
Aa31LG4G11270 Aethionema arabicum HOM05D001860 ORTHO05D004922 1.2e-42 177.9 237 44.7
Sp5g24620 Schrenkiella parvula HOM05D001860 ORTHO05D004922 4.4e-42 176.0 143 60.1
BcaC08g45887 Brassica carinata HOM05D001860 ORTHO05D004922 5.0e-38 162.5 129 63.6
CBR_g41443 Chara braunii HOM05D001860 ORTHO05D004922 1.9e-37 160.6 268 38.1
Cpa.g.sc350.4 Carica papaya HOM05D001860 ORTHO05D004922 4.2e-37 159.5 170 52.4
Thhalv10019188m.g Eutrema salsugineum HOM05D001860 ORTHO05D004922 5.5e-37 159.1 167 49.7
A07p31570 Brassica napus HOM05D001860 ORTHO05D004922 8.0e-36 155.2 144 57.6
C06p40370 Brassica napus HOM05D001860 ORTHO05D004922 4.0e-35 152.9 120 62.5
C06p36870 Brassica napus HOM05D000005 ORTHO05D042562 4.4e-34 149.4 120 63.3
MCO03G556 Micromonas commoda HOM05D001860 ORTHO05D004922 1.3e-33 147.9 234 40.2
BolC6t38800H Brassica oleracea HOM05D000005 ORTHO05D042562 2.2e-33 147.1 120 62.5
PRCOL_00000783 Prasinoderma coloniale HOM05D001860 ORTHO05D004922 1.7e-30 137.5 172 45.3
MCO09G753 Micromonas commoda HOM05D001860 ORTHO05D004922 7.2e-29 132.1 144 47.9
PRCOL_00003589 Prasinoderma coloniale HOM05D001860 ORTHO05D004922 1.8e-27 127.5 184 42.4
Cre07.g342550 Chlamydomonas reinhardtii HOM05D001860 ORTHO05D004922 4.4e-26 122.9 251 33.9
CSS0034144 Camellia sinensis var. sinensis HOM05D001860 ORTHO05D004922 1.1e-24 118.2 83 65.1
CSS0016207 Camellia sinensis var. sinensis HOM05D001860 ORTHO05D004922 7.0e-24 115.5 76 68.4
VMungo1383G2064 Vigna mungo HOM05D001860 ORTHO05D004922 1.0e-19 101.7 92 48.9
Thecc.01G276100 Theobroma cacao HOM05D001860 ORTHO05D004922 1.5e-18 97.8 84 48.8
Actinidia19883 Actinidia chinensis HOM05D001860 ORTHO05D004922 2.2e-17 94.0 109 46.8
arahy.Tifrunner.gnm1.ann1.661SM0 Arachis hypogaea HOM05D001860 ORTHO05D004922 1.1e-13 81.6 85 50.6
CBR_g34579 Chara braunii HOM05D001860 ORTHO05D019626 1.2e-12 78.2 181 35.9
MCO03G203 Micromonas commoda HOM05D023757 ORTHO05D024904 1.4e-11 74.7 151 34.4
PRCOL_00001331 Prasinoderma coloniale HOM05D001860 ORTHO05D004922 1.4e-11 74.7 200 27.0
Zm00001eb254460 Zea mays HOM05D001860 ORTHO05D004922 1.7e-09 67.8 77 48.1
Cfa024139 Carpinus fangiana HOM05D001860 ORTHO05D004922 2.9e-09 67.0 187 28.9
AagrBONN_evm.TU.Sc2ySwM_368.1265 Anthoceros agrestis HOM05D019459 ORTHO05D019626 5.4e-08 62.8 187 30.5
PRCOL_00002204 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 1.0e-06 58.5 112 33.0
CDE08G0834 Ceratophyllum demersum HOM05D001860 ORTHO05D004922 1.7e-06 57.8 59 45.8
MCO11G161 Micromonas commoda HOM05D019459 ORTHO05D019626 5.0e-06 56.2 128 32.0
Mapoly0068s0103 Marchantia polymorpha HOM05D019459 ORTHO05D019626 6.6e-06 55.8 128 33.6


User provided reference genes

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