Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow2G1603 Salvia bowleyana HOM05D003533 ORTHO05D004009 1.4e-34 149.1 74 100.0
SalBow2G3186 Salvia bowleyana HOM05D003533 ORTHO05D004009 1.4e-34 149.1 74 100.0
Oeu017591.1 Olea europaea HOM05D003533 ORTHO05D004009 1.1e-15 86.3 80 55.0
Cc11_g14110 Coffea canephora HOM05D003533 ORTHO05D004009 3.5e-14 81.3 81 55.6
Peaxi162Scf01141g00003 Petunia axillaris HOM05D003533 ORTHO05D004009 1.3e-13 79.3 81 58.0
Migut.E00134 Erythranthe guttata HOM05D003533 ORTHO05D004009 1.8e-13 79.0 69 60.9
Nitab4.5_0002059g0100 Nicotiana tabacum HOM05D003533 ORTHO05D004009 8.7e-13 76.6 79 53.2
Lsat_1_v5_gn_1_11280 Lactuca sativa HOM05D003533 ORTHO05D004009 2.5e-12 75.1 82 53.7
Migut.L01388 Erythranthe guttata HOM05D003533 ORTHO05D004009 4.3e-12 74.3 73 54.8
FAN12G1992 Fragaria x ananassa HOM05D003533 ORTHO05D004009 4.3e-12 74.3 83 50.6
RcHm_v2.0_Chr4g0444801 Rosa chinensis HOM05D003533 ORTHO05D004009 5.6e-12 73.9 83 49.4
FvH4_4g35190 Fragaria vesca HOM05D003533 ORTHO05D004009 9.6e-12 73.2 83 49.4
Nitab4.5_0002312g0110 Nicotiana tabacum HOM05D003533 ORTHO05D004009 9.6e-12 73.2 73 53.4
unitig_22.g6479 Utricularia gibba HOM05D003533 ORTHO05D004009 1.3e-11 72.8 75 49.3
FAN07G1024 Fragaria x ananassa HOM05D003533 ORTHO05D004009 1.6e-11 72.4 83 50.6
FAN22G0766 Fragaria x ananassa HOM05D003533 ORTHO05D004009 1.6e-11 72.4 83 50.6
CiPaw.06G076000 Carya illinoinensis HOM05D003533 ORTHO05D004009 2.1e-11 72.0 84 52.4
CiPaw.06G076100 Carya illinoinensis HOM05D003533 ORTHO05D004009 2.1e-11 72.0 84 52.4
CiPaw.06G076200 Carya illinoinensis HOM05D003533 ORTHO05D004009 2.1e-11 72.0 84 52.4
Hma1.2p1_0160F.1_g070540 Hydrangea macrophylla HOM05D003533 ORTHO05D004009 2.1e-11 72.0 81 53.1
Manes.06G100300 Manihot esculenta HOM05D003533 ORTHO05D004009 2.1e-11 72.0 85 47.1
Nitab4.5_0002059g0090 Nicotiana tabacum HOM05D003533 ORTHO05D004009 2.1e-11 72.0 81 53.1
CAN.G159.12 Capsicum annuum HOM05D003533 ORTHO05D004009 2.8e-11 71.6 83 47.0
TAR622G1413 Trochodendron aralioides HOM05D003533 ORTHO05D004009 3.7e-11 71.2 81 49.4
CiPaw.06G076300 Carya illinoinensis HOM05D003533 ORTHO05D004009 8.1e-11 70.1 84 51.2
HanXRQChr09g0237871 Helianthus annuus HOM05D003533 ORTHO05D004009 1.4e-10 69.3 78 48.7
MD16G1084900 Malus domestica HOM05D003533 ORTHO05D004009 1.8e-10 68.9 85 49.4
Oeu060842.1 Olea europaea HOM05D003533 ORTHO05D004009 1.8e-10 68.9 79 51.9
Thecc.03G004000 Theobroma cacao HOM05D003533 ORTHO05D004009 2.4e-10 68.6 81 46.9
Nitab4.5_0002312g0100 Nicotiana tabacum HOM05D003533 ORTHO05D004009 3.1e-10 68.2 82 53.7
vmacro16587 Vaccinium macrocarpon HOM05D003533 ORTHO05D004009 4.0e-10 67.8 80 46.2
Glyma.06G186200 Glycine max HOM05D003533 ORTHO05D004009 5.3e-10 67.4 69 53.6
Manes.14G070400 Manihot esculenta HOM05D003533 ORTHO05D004009 6.9e-10 67.0 84 44.0
QL10p012332 Quercus lobata HOM05D003533 ORTHO05D004009 6.9e-10 67.0 82 47.6
Thecc.03G004200 Theobroma cacao HOM05D003533 ORTHO05D004009 6.9e-10 67.0 81 46.9
TAR629G1875 Trochodendron aralioides HOM05D003533 ORTHO05D004009 6.9e-10 67.0 81 46.9
Medtr4g106500 Medicago truncatula HOM05D003533 ORTHO05D004009 9.0e-10 66.6 76 52.6
DCAR_026103 Daucus carota HOM05D003533 ORTHO05D004009 1.2e-09 66.2 73 52.1
Duzib084G0973 Durio zibethinus HOM05D003533 ORTHO05D004009 1.2e-09 66.2 84 47.6
FAN17G1844 Fragaria x ananassa HOM05D003533 ORTHO05D004009 1.2e-09 66.2 83 47.0
CSS0013527 Camellia sinensis var. sinensis HOM05D003533 ORTHO05D004009 1.5e-09 65.9 85 45.9
CSS0016862 Camellia sinensis var. sinensis HOM05D003533 ORTHO05D004009 1.5e-09 65.9 85 45.9
Solyc05g006390.1 Solanum lycopersicum HOM05D003533 ORTHO05D004009 1.5e-09 65.9 73 53.4
MBI14_g31145_MAGBIO Magnolia biondii HOM05D003533 ORTHO05D004009 2.0e-09 65.5 78 46.2
PGSC0003DMG400022647 Solanum tuberosum HOM05D003533 ORTHO05D004009 2.0e-09 65.5 71 49.3
Ah.02g112790 Amaranthus hybridus HOM05D003533 ORTHO05D004009 3.4e-09 64.7 92 43.5
Sopen05g002310 Solanum pennellii HOM05D003533 ORTHO05D004009 3.4e-09 64.7 73 53.4
TWI81G0654 Tripterygium wilfordii HOM05D003533 ORTHO05D004009 4.5e-09 64.3 75 50.7
Glyma.04G178500 Glycine max HOM05D003533 ORTHO05D004009 5.8e-09 63.9 71 50.7
Glyma.17G093500 Glycine max HOM05D003533 ORTHO05D004009 5.8e-09 63.9 78 50.0
Lsat_1_v5_gn_1_11220 Lactuca sativa HOM05D003533 ORTHO05D004009 5.8e-09 63.9 81 45.7
Rhsim12G0161500 Rhododendron simsii HOM05D003533 ORTHO05D004009 7.6e-09 63.5 81 46.9
AT1G19020 Arabidopsis thaliana HOM05D003533 ORTHO05D004009 1.0e-08 63.2 84 47.6
COL.COLO4_37881 Corchorus olitorius HOM05D003533 ORTHO05D004009 1.0e-08 63.2 82 47.6
Glyma.05G033600 Glycine max HOM05D003533 ORTHO05D004009 1.0e-08 63.2 75 50.7
Phvul.003G196800 Phaseolus vulgaris HOM05D003533 ORTHO05D004009 1.0e-08 63.2 80 47.5
AL1G31580 Arabidopsis lyrata HOM05D003533 ORTHO05D004009 1.3e-08 62.8 82 47.6
CANSAT54G2961 Cannabis sativa HOM05D003533 ORTHO05D004009 1.3e-08 62.8 79 48.1
CiPaw.12G022900 Carya illinoinensis HOM05D003533 ORTHO05D004009 1.3e-08 62.8 85 44.7
ECA247G1125 Erigeron canadensis HOM05D003533 ORTHO05D004009 1.7e-08 62.4 83 45.8
Nitab4.5_0003386g0040 Nicotiana tabacum HOM05D003533 ORTHO05D004009 1.7e-08 62.4 78 47.4
Oeu005690.1 Olea europaea HOM05D003533 ORTHO05D004009 1.7e-08 62.4 72 51.4
Psat0s489g0040 Pisum sativum HOM05D003533 ORTHO05D004009 1.7e-08 62.4 69 49.3
BcaB03g12939 Brassica carinata HOM05D003533 ORTHO05D004009 2.2e-08 62.0 76 50.0
Lj4g0015145 Lotus japonicus HOM05D003533 ORTHO05D004009 2.2e-08 62.0 80 43.8
TWI15G0955 Tripterygium wilfordii HOM05D003533 ORTHO05D004009 2.2e-08 62.0 80 48.8
BcaB03g14468 Brassica carinata HOM05D003533 ORTHO05D004009 2.9e-08 61.6 80 46.2
FAN18G0586 Fragaria x ananassa HOM05D003533 ORTHO05D004009 2.9e-08 61.6 83 45.8
Aqoxy3G03117 Aquilegia oxysepala HOM05D003533 ORTHO05D004009 3.8e-08 61.2 83 44.6
BraA09t41332Z Brassica rapa HOM05D003533 ORTHO05D004009 3.8e-08 61.2 66 51.5
MELO3C017124.2 Cucumis melo HOM05D003533 ORTHO05D004009 4.9e-08 60.8 87 42.5
PSO013G0065 Papaver somniferum HOM05D003533 ORTHO05D004009 6.5e-08 60.5 88 43.2
BcaB07g31922 Brassica carinata HOM05D003533 ORTHO05D004009 8.4e-08 60.1 83 44.6
CiPaw.11G032200 Carya illinoinensis HOM05D003533 ORTHO05D004009 8.4e-08 60.1 91 44.0
Cc11_g14120 Coffea canephora HOM05D003533 ORTHO05D004009 8.4e-08 60.1 76 44.7
Lsat_1_v5_gn_1_12101 Lactuca sativa HOM05D003533 ORTHO05D004009 8.4e-08 60.1 88 38.6
C08p42830 Brassica napus HOM05D003533 ORTHO05D004009 1.1e-07 59.7 66 50.0
BolC8t51839H Brassica oleracea HOM05D003533 ORTHO05D004009 1.1e-07 59.7 66 50.0
MD06G1181300 Malus domestica HOM05D003533 ORTHO05D004009 1.4e-07 59.3 77 44.2
Medtr3g078420 Medicago truncatula HOM05D003533 ORTHO05D004009 1.4e-07 59.3 72 48.6
Sopen03g032860 Solanum pennellii HOM05D003533 ORTHO05D004009 1.4e-07 59.3 81 42.0
Os02g0740600 Oryza sativa ssp. japonica HOM05D003533 ORTHO05D004009 1.9e-07 58.9 72 44.4
Phvul.009G182200 Phaseolus vulgaris HOM05D003533 ORTHO05D004009 1.9e-07 58.9 74 47.3
PSO013G0048 Papaver somniferum HOM05D003533 ORTHO05D004009 2.5e-07 58.5 81 46.9
CARHR019640 Cardamine hirsuta HOM05D003533 ORTHO05D004009 3.2e-07 58.2 77 42.9
Hma1.2p1_0002F.1_g002860 Hydrangea macrophylla HOM05D003533 ORTHO05D004009 3.2e-07 58.2 80 42.5
Lj1g0014022 Lotus japonicus HOM05D003533 ORTHO05D004009 4.2e-07 57.8 70 47.1
MBI14_g31147_MAGBIO Magnolia biondii HOM05D003533 ORTHO05D004009 4.2e-07 57.8 76 42.1
A06p15230 Brassica napus HOM05D003533 ORTHO05D004009 5.5e-07 57.4 83 43.4
BraA06t24637Z Brassica rapa HOM05D003533 ORTHO05D004009 5.5e-07 57.4 83 43.4
Oeu005054.1 Olea europaea HOM05D003533 ORTHO05D004009 5.5e-07 57.4 72 47.2
Eucgr.K02881 Eucalyptus grandis HOM05D003533 ORTHO05D004009 7.1e-07 57.0 82 45.1
FAN13G2147 Fragaria x ananassa HOM05D003533 ORTHO05D004009 7.1e-07 57.0 81 45.7
QL03p067197 Quercus lobata HOM05D003533 ORTHO05D004009 7.1e-07 57.0 73 42.5
Thecc.02G240400 Theobroma cacao HOM05D003533 ORTHO05D004009 7.1e-07 57.0 81 46.9
Ca_16210_v3 Cicer arietinum L. HOM05D003533 ORTHO05D004009 1.2e-06 56.2 74 47.3
COL.COLO4_21432 Corchorus olitorius HOM05D003533 ORTHO05D004009 1.2e-06 56.2 84 39.3
AL5G27512 Arabidopsis lyrata HOM05D003533 ORTHO05D004009 1.6e-06 55.8 75 46.7
C08p19120 Brassica napus HOM05D003533 ORTHO05D004009 1.6e-06 55.8 37 70.3
Carub.0005s1428 Capsella rubella HOM05D003533 ORTHO05D004009 1.6e-06 55.8 73 46.6
TPR.G31485 Trifolium pratense HOM05D003533 ORTHO05D004009 1.6e-06 55.8 70 45.7
A08p30040 Brassica napus HOM05D003533 ORTHO05D004009 2.7e-06 55.1 74 44.6
A09p59550 Brassica napus HOM05D003533 ORTHO05D004009 2.7e-06 55.1 82 41.5
BraA08t34939Z Brassica rapa HOM05D003533 ORTHO05D004009 2.7e-06 55.1 74 44.6
MD14G1187200 Malus domestica HOM05D003533 ORTHO05D004009 2.7e-06 55.1 78 42.3
BcaC07g41276 Brassica carinata HOM05D003533 ORTHO05D004009 3.5e-06 54.7 85 41.2
Prupe.5G179600 Prunus persica HOM05D003533 ORTHO05D004009 3.5e-06 54.7 71 43.7
Sp1g16980 Schrenkiella parvula HOM05D003533 ORTHO05D004009 3.5e-06 54.7 84 44.0
Cfa009093 Carpinus fangiana HOM05D003533 ORTHO05D004009 4.6e-06 54.3 90 41.1
Thhalv10009213m.g Eutrema salsugineum HOM05D003533 ORTHO05D004009 4.6e-06 54.3 86 40.7
Lalb_Chr12g0201361 Lupinus albus HOM05D003533 ORTHO05D004009 4.6e-06 54.3 78 44.9
Sc04g0002090 Simmondsia chinensis HOM05D003533 ORTHO05D004009 4.6e-06 54.3 85 36.5
ATR0824G240 Amborella trichopoda HOM05D003533 ORTHO05D004009 6.0e-06 53.9 72 43.1
HanXRQChr09g0271891 Helianthus annuus HOM05D003533 ORTHO05D004009 6.0e-06 53.9 74 41.9
PGSC0003DMG400024583 Solanum tuberosum HOM05D003533 ORTHO05D004009 6.0e-06 53.9 81 42.0
BolC8t49535H Brassica oleracea HOM05D003533 ORTHO05D004009 7.9e-06 53.5 37 67.6
TPR.G37447 Trifolium pratense HOM05D003533 ORTHO05D004009 7.9e-06 53.5 68 45.6


User provided reference genes

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