Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow2G3030 Salvia bowleyana HOM05D008544 ORTHO05D010680 1.1e-59 233.0 111 100.0
SalBow5G2244 Salvia bowleyana HOM05D008544 ORTHO05D010680 8.4e-44 180.3 109 75.2
SalBow6G1404 Salvia bowleyana HOM05D008544 ORTHO05D010680 1.4e-43 179.5 108 75.0
SalBow1G1334 Salvia bowleyana HOM05D008544 ORTHO05D010680 4.2e-43 177.9 109 76.1
SalBow2G1222 Salvia bowleyana HOM05D008544 ORTHO05D010680 7.1e-43 177.2 109 75.2
SalBow8G0778 Salvia bowleyana HOM05D008544 ORTHO05D010680 2.8e-39 165.2 109 69.7
SalBow3G1668 Salvia bowleyana HOM05D008544 ORTHO05D010680 1.1e-38 163.3 109 67.0
SalBow1G5222 Salvia bowleyana HOM05D008544 ORTHO05D010680 1.9e-35 152.5 109 68.8
SalBow2G2972 Salvia bowleyana HOM05D008544 ORTHO05D010680 1.2e-34 149.8 111 68.5
SalBow7G4480 Salvia bowleyana HOM05D008544 ORTHO05D010680 1.6e-26 122.9 91 64.8
SalBow6G0195 Salvia bowleyana HOM05D008544 ORTHO05D010680 7.9e-26 120.6 108 50.0
SalBow7G1419 Salvia bowleyana HOM05D008544 ORTHO05D010680 7.9e-26 120.6 108 50.0
SalBow7G2169 Salvia bowleyana HOM05D008544 ORTHO05D010680 7.9e-26 120.6 108 50.0
SalBow7G3665 Salvia bowleyana HOM05D008544 ORTHO05D010680 6.7e-25 117.5 87 57.5
SalBow1G6152 Salvia bowleyana HOM05D008544 ORTHO05D010680 8.7e-25 117.1 86 68.6
SalBow6G6307 Salvia bowleyana HOM05D008544 ORTHO05D010680 9.6e-24 113.6 109 51.4
SalBow1G5774 Salvia bowleyana HOM05D008544 ORTHO05D010680 2.1e-23 112.5 76 72.4
SalBow3G3805 Salvia bowleyana HOM05D008544 ORTHO05D010680 4.8e-23 111.3 105 51.4
SalBow8G1086 Salvia bowleyana HOM05D008544 ORTHO05D010680 1.1e-22 110.2 112 47.3
SalBow6G5997 Salvia bowleyana HOM05D008544 ORTHO05D010680 4.9e-20 101.3 54 75.9
SalBow7G3314 Salvia bowleyana HOM05D008544 ORTHO05D010680 8.4e-20 100.5 81 55.6
SalBow7G4196 Salvia bowleyana HOM05D008544 ORTHO05D010680 8.4e-20 100.5 81 55.6
SalBow5G2319 Salvia bowleyana HOM05D008544 ORTHO05D010680 3.2e-19 98.6 89 58.4
SalBow6G3855 Salvia bowleyana HOM05D008544 ORTHO05D010680 3.2e-19 98.6 70 70.0
SalBow8G2489 Salvia bowleyana HOM05D008544 ORTHO05D010680 3.2e-19 98.6 81 58.0
SalBow3G4647 Salvia bowleyana HOM05D008544 ORTHO05D010680 4.2e-19 98.2 73 60.3
SalBow1G6959 Salvia bowleyana HOM05D008544 ORTHO05D010680 2.3e-17 92.4 67 65.7
SalBow2G0093 Salvia bowleyana HOM05D008544 ORTHO05D010680 3.7e-15 85.1 58 69.0
SalBow5G4468 Salvia bowleyana HOM05D008544 ORTHO05D010680 8.2e-15 84.0 62 62.9
SalBow3G1587 Salvia bowleyana HOM05D008544 ORTHO05D010680 1.4e-14 83.2 111 38.7
SalBow1G4113 Salvia bowleyana HOM05D008544 ORTHO05D010680 3.1e-14 82.0 62 54.8
SalBow1G6274 Salvia bowleyana HOM05D008544 ORTHO05D010680 5.3e-14 81.3 78 50.0
SalBow7G4617 Salvia bowleyana HOM05D008544 ORTHO05D010680 5.9e-13 77.8 47 68.1
SalBow1G5698 Salvia bowleyana HOM05D008544 ORTHO05D010680 1.0e-12 77.0 79 45.6
SalBow8G2308 Salvia bowleyana HOM05D008544 ORTHO05D010680 2.2e-12 75.9 116 41.4
SalBow6G3258 Salvia bowleyana HOM05D008544 ORTHO05D010680 2.9e-12 75.5 56 66.1
SalBow1G0597 Salvia bowleyana HOM05D008544 ORTHO05D010680 4.2e-11 71.6 79 43.0
SalBow1G7417 Salvia bowleyana HOM05D008544 ORTHO05D010680 7.2e-11 70.9 105 38.1
Hma1.2p1_2569F.1_g324543 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 2.1e-10 69.3 54 53.7
Hma1.2p1_0470F.1_g159220 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 2.7e-10 68.9 84 42.9
SalBow5G0497 Salvia bowleyana HOM05D008544 ORTHO05D010680 7.9e-10 67.4 105 37.1
SalBow8G3622 Salvia bowleyana HOM05D008544 ORTHO05D010680 7.9e-10 67.4 47 59.6
SGA_v2.0_scaffold14G06948 Striga asiatica HOM05D001383 ORTHO05D000309 1.4e-09 66.6 67 43.3
Rhsim01G0020400 Rhododendron simsii HOM05D001383 ORTHO05D000309 2.3e-09 65.9 52 53.8
Hma1.2p1_0224F.1_g094550 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 3.9e-09 65.1 48 56.2
Hma1.2p1_0362F.1_g136570 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 8.8e-09 63.9 51 56.9
Hma1.2p1_0128F.1_g059990 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.5e-08 63.2 48 58.3
Hma1.2p1_0283F.1_g113450 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.9e-08 62.8 48 58.3
Hma1.2p1_1219F.1_g267960 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.9e-08 62.8 51 54.9
COL.COLO4_15560 Corchorus olitorius HOM05D015200 ORTHO05D000309 2.5e-08 62.4 55 50.9
Hma1.2p1_0048F.1_g028060 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 2.5e-08 62.4 81 43.2
Hma1.2p1_1389F.1_g280030 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 2.5e-08 62.4 81 43.2
Hma1.2p1_1407F.1_g281470 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 3.3e-08 62.0 52 50.0
SalBow1G6881 Salvia bowleyana HOM05D008544 ORTHO05D010680 4.3e-08 61.6 74 41.9
COL.COLO4_06499 Corchorus olitorius HOM05D015200 ORTHO05D000309 5.7e-08 61.2 55 49.1
SalBow6G0542 Salvia bowleyana HOM05D008544 ORTHO05D010680 5.7e-08 61.2 74 40.5
COL.COLO4_10433 Corchorus olitorius HOM05D023691 ORTHO05D000309 7.4e-08 60.8 58 41.4
SGA_v2.0_scaffold123G33399 Striga asiatica HOM05D001383 ORTHO05D000309 7.4e-08 60.8 73 41.1
Atru.chr9.1876 Acer truncatum HOM05D001383 ORTHO05D000309 9.7e-08 60.5 99 32.3
SGA_v2.0_scaffold364G49972 Striga asiatica HOM05D001383 ORTHO05D000309 9.7e-08 60.5 76 39.5
SGA_v2.0_scaffold45G16985 Striga asiatica HOM05D001383 ORTHO05D000309 9.7e-08 60.5 76 39.5
SGA_v2.0_scaffold100G29657 Striga asiatica HOM05D001383 ORTHO05D000309 1.3e-07 60.1 53 47.2
SGA_v2.0_scaffold670G53420 Striga asiatica HOM05D001383 ORTHO05D000309 1.3e-07 60.1 53 47.2
Atru.chr1.3458 Acer truncatum HOM05D001383 ORTHO05D000309 1.7e-07 59.7 85 36.5
DCAR_001034 Daucus carota HOM05D001383 ORTHO05D000309 1.7e-07 59.7 113 33.6
Dinv14680 Davidia involucrata HOM05D008126 ORTHO05D000309 1.7e-07 59.7 59 42.4
Lj2P1096T11 Lonicera japonica HOM05D008126 ORTHO05D000309 1.7e-07 59.7 119 30.3
Peaxi162Scf00320g00217 Petunia axillaris HOM05D001383 ORTHO05D000309 1.7e-07 59.7 57 49.1
Dinv22727 Davidia involucrata HOM05D008126 ORTHO05D000309 2.2e-07 59.3 37 59.5
QL09p043658 Quercus lobata HOM05D001383 ORTHO05D000309 2.2e-07 59.3 53 45.3
COL.COLO4_30330 Corchorus olitorius HOM05D015200 ORTHO05D000309 2.8e-07 58.9 55 47.3
Hma1.2p1_1041F.1_g251030 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 2.8e-07 58.9 53 49.1
BcaC08g43835 Brassica carinata HOM05D007774 ORTHO05D000309 3.7e-07 58.5 76 42.1
Peaxi162Scf00013g01517 Petunia axillaris HOM05D001883 ORTHO05D002184 3.7e-07 58.5 49 51.0
BcaC05g26851 Brassica carinata HOM05D007774 ORTHO05D000309 4.8e-07 58.2 76 42.1
BcaC06g36173 Brassica carinata HOM05D007774 ORTHO05D000309 4.8e-07 58.2 76 42.1
Eucgr.L02287 Eucalyptus grandis HOM05D001383 ORTHO05D000309 4.8e-07 58.2 87 36.8
Eucgr.L02571 Eucalyptus grandis HOM05D001383 ORTHO05D000309 4.8e-07 58.2 79 40.5
Lj5P426T12 Lonicera japonica HOM05D008126 ORTHO05D000309 4.8e-07 58.2 119 30.3
QL09p032030 Quercus lobata HOM05D001383 ORTHO05D000309 4.8e-07 58.2 53 47.2
SGA_v2.0_scaffold28G12041 Striga asiatica HOM05D001383 ORTHO05D000309 4.8e-07 58.2 73 39.7
SGA_v2.0_scaffold55G19817 Striga asiatica HOM05D001383 ORTHO05D000309 4.8e-07 58.2 67 38.8
Eucgr.A00047 Eucalyptus grandis HOM05D001383 ORTHO05D000309 6.3e-07 57.8 51 52.9
Eucgr.E03636 Eucalyptus grandis HOM05D001383 ORTHO05D000309 6.3e-07 57.8 51 52.9
Lj4E150G0 Lonicera japonica HOM05D008126 ORTHO05D000309 6.3e-07 57.8 127 28.3
Rhsim11G0046300 Rhododendron simsii HOM05D001383 ORTHO05D000309 6.3e-07 57.8 47 53.2
DCAR_029331 Daucus carota HOM05D001383 ORTHO05D000309 8.2e-07 57.4 50 46.0
Dinv26432 Davidia involucrata HOM05D001383 ORTHO05D000309 8.2e-07 57.4 57 49.1
Medtr2g008290 Medicago truncatula HOM05D001383 ORTHO05D000309 8.2e-07 57.4 60 40.0
Medtr5g021030 Medicago truncatula HOM05D001383 ORTHO05D000309 8.2e-07 57.4 60 40.0
QL06p049616 Quercus lobata HOM05D001383 ORTHO05D000309 8.2e-07 57.4 53 43.4
COL.COLO4_13767 Corchorus olitorius HOM05D002127 ORTHO05D002274 1.1e-06 57.0 58 39.7
Hma1.2p1_1051F.1_g252070 Hydrangea macrophylla HOM05D008126 ORTHO05D000309 1.1e-06 57.0 40 55.0
Hma1.2p1_1382F.1_g279350 Hydrangea macrophylla HOM05D008126 ORTHO05D000309 1.1e-06 57.0 63 41.3
Peaxi162Scf01167g00009 Petunia axillaris HOM05D004040 ORTHO05D000309 1.1e-06 57.0 65 41.5
Prupe.7G055500 Prunus persica HOM05D001383 ORTHO05D000309 1.1e-06 57.0 64 40.6
Prupe.8G093700 Prunus persica HOM05D001383 ORTHO05D000309 1.1e-06 57.0 59 44.1
SalBow8G1747 Salvia bowleyana HOM05D008544 ORTHO05D010680 1.1e-06 57.0 58 50.0
SGA_v2.0_scaffold333G49004 Striga asiatica HOM05D001383 ORTHO05D000309 1.1e-06 57.0 52 48.1
SGA_v2.0_scaffold4G02359 Striga asiatica HOM05D001383 ORTHO05D000309 1.1e-06 57.0 59 39.0
CAN.G165.9 Capsicum annuum HOM05D008741 ORTHO05D010787 1.4e-06 56.6 86 34.9
Medtr2g017540 Medicago truncatula HOM05D001383 ORTHO05D000309 1.4e-06 56.6 61 45.9
Nitab4.5_0007977g0060 Nicotiana tabacum HOM05D001383 ORTHO05D000309 1.4e-06 56.6 50 52.0
Peaxi162Scf00723g00110 Petunia axillaris HOM05D001383 ORTHO05D000309 1.4e-06 56.6 53 49.1
Actinidia16536 Actinidia chinensis HOM05D001383 ORTHO05D000309 1.8e-06 56.2 74 39.2
COL.COLO4_35283 Corchorus olitorius HOM05D023691 ORTHO05D000309 1.8e-06 56.2 60 41.7
DCAR_022041 Daucus carota HOM05D000130 ORTHO05D000257 1.8e-06 56.2 66 43.9
Eucgr.H02671 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.8e-06 56.2 107 33.6
Hma1.2p1_0785F.1_g217480 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.8e-06 56.2 42 50.0
Nitab4.5_0000216g0400 Nicotiana tabacum HOM05D001383 ORTHO05D000309 1.8e-06 56.2 63 47.6
Nitab4.5_0003017g0010 Nicotiana tabacum HOM05D001883 ORTHO05D002184 1.8e-06 56.2 48 47.9
PGSC0003DMG400012467 Solanum tuberosum HOM05D008741 ORTHO05D010787 1.8e-06 56.2 47 46.8
SGA_v2.0_scaffold10G05311 Striga asiatica HOM05D001383 ORTHO05D000309 2.4e-06 55.8 58 43.1
SGA_v2.0_scaffold310G48213 Striga asiatica HOM05D001383 ORTHO05D000309 2.4e-06 55.8 72 37.5
SGA_v2.0_scaffold38G14998 Striga asiatica HOM05D011630 ORTHO05D014269 2.4e-06 55.8 105 30.5
DCAR_029798 Daucus carota HOM05D001383 ORTHO05D000309 3.1e-06 55.5 94 35.1
Dinv05615 Davidia involucrata HOM05D001383 ORTHO05D000309 3.1e-06 55.5 48 52.1
Lj2P78T23 Lonicera japonica HOM05D008126 ORTHO05D000309 3.1e-06 55.5 114 32.5
Medtr3g045410 Medicago truncatula HOM05D001383 ORTHO05D000309 3.1e-06 55.5 55 41.8
Peaxi162Scf00039g00714 Petunia axillaris HOM05D001383 ORTHO05D000309 3.1e-06 55.5 60 46.7
Peaxi162Scf00066g00114 Petunia axillaris HOM05D001883 ORTHO05D002184 3.1e-06 55.5 128 29.7
Peaxi162Scf00756g00016 Petunia axillaris HOM05D001383 ORTHO05D000309 3.1e-06 55.5 60 46.7
Peaxi162Scf01070g00003 Petunia axillaris HOM05D001883 ORTHO05D002184 3.1e-06 55.5 128 29.7
SalBow3G2746 Salvia bowleyana HOM05D001996 ORTHO05D002072 3.1e-06 55.5 67 43.3
SGA_v2.0_scaffold23G10087 Striga asiatica HOM05D001383 ORTHO05D000309 3.1e-06 55.5 48 47.9
BcaC01g02929 Brassica carinata HOM05D007774 ORTHO05D000309 4.1e-06 55.1 76 40.8
Cfa014980 Carpinus fangiana HOM05D016218 ORTHO05D000309 4.1e-06 55.1 51 45.1
COL.COLO4_33074 Corchorus olitorius HOM05D015200 ORTHO05D000309 4.1e-06 55.1 55 45.5
Dinv08418 Davidia involucrata HOM05D005290 ORTHO05D006040 4.1e-06 55.1 56 48.2
Hma1.2p1_0211F.1_g089820 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 4.1e-06 55.1 107 32.7
Nitab4.5_0000115g0400 Nicotiana tabacum HOM05D001383 ORTHO05D000309 4.1e-06 55.1 50 52.0
PGSC0003DMG400039121 Solanum tuberosum HOM05D008741 ORTHO05D010787 4.1e-06 55.1 47 42.6
BolC6t36100H Brassica oleracea HOM05D007774 ORTHO05D000309 5.3e-06 54.7 96 29.2
DCAR_011158 Daucus carota HOM05D001383 ORTHO05D000309 5.3e-06 54.7 113 30.1
Eucgr.L00016 Eucalyptus grandis HOM05D001383 ORTHO05D000309 5.3e-06 54.7 110 33.6
Eucgr.L02007 Eucalyptus grandis HOM05D001383 ORTHO05D000309 5.3e-06 54.7 51 51.0
Lj8P545T2 Lonicera japonica HOM05D008126 ORTHO05D000309 5.3e-06 54.7 110 31.8
Nitab4.5_0002367g0200 Nicotiana tabacum HOM05D001883 ORTHO05D002184 5.3e-06 54.7 94 33.0
vmacro00766 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 5.3e-06 54.7 44 47.7
CAN.G1512.5 Capsicum annuum HOM05D008741 ORTHO05D010787 6.9e-06 54.3 87 34.5
Dinv09469 Davidia involucrata HOM05D003061 ORTHO05D003427 6.9e-06 54.3 47 53.2
Hma1.2p1_1481F.1_g286180 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 6.9e-06 54.3 51 47.1
Lj4P203T20 Lonicera japonica HOM05D008126 ORTHO05D000309 6.9e-06 54.3 113 30.1
Lj6P58T20 Lonicera japonica HOM05D008126 ORTHO05D000309 6.9e-06 54.3 46 43.5
Medtr8g070590 Medicago truncatula HOM05D001383 ORTHO05D000309 6.9e-06 54.3 60 36.7
Nitab4.5_0000517g0120 Nicotiana tabacum HOM05D001883 ORTHO05D002184 6.9e-06 54.3 47 48.9
PGSC0003DMG400007751 Solanum tuberosum HOM05D008741 ORTHO05D010787 6.9e-06 54.3 70 34.3
PGSC0003DMG400017162 Solanum tuberosum HOM05D008741 ORTHO05D010787 6.9e-06 54.3 46 45.7
SGA_v2.0_scaffold268G46210 Striga asiatica HOM05D001383 ORTHO05D000309 6.9e-06 54.3 48 50.0
Migut.L00955 Erythranthe guttata HOM05D001383 ORTHO05D000309 9.1e-06 53.9 109 34.9
Eucgr.L01799 Eucalyptus grandis HOM05D001383 ORTHO05D000309 9.1e-06 53.9 40 57.5
Lj3P12T7 Lonicera japonica HOM05D008126 ORTHO05D000309 9.1e-06 53.9 113 30.1
Lj3P238T23 Lonicera japonica HOM05D008126 ORTHO05D000309 9.1e-06 53.9 46 45.7
Nitab4.5_0001931g0130 Nicotiana tabacum HOM05D001883 ORTHO05D002184 9.1e-06 53.9 48 45.8
Peaxi162Scf00914g00516 Petunia axillaris HOM05D004040 ORTHO05D000309 9.1e-06 53.9 56 44.6
Peaxi162Scf43039g00001 Petunia axillaris HOM05D001883 ORTHO05D002184 9.1e-06 53.9 58 43.1
SGA_v2.0_scaffold13G06411 Striga asiatica HOM05D001383 ORTHO05D000309 9.1e-06 53.9 105 26.7
SGA_v2.0_scaffold156G37257 Striga asiatica HOM05D035478 ORTHO05D000309 9.1e-06 53.9 51 43.1


User provided reference genes

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