Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow2G2967 Salvia bowleyana HOM05D006993 ORTHO05D008336 4.7e-95 351.3 190 100.0
SalBow6G6587 Salvia bowleyana HOM05D006993 ORTHO05D008336 1.9e-67 259.6 188 81.9
SalBow2G0576 Salvia bowleyana HOM05D006993 ORTHO05D008336 4.9e-60 235.0 150 88.0
Migut.D00756 Erythranthe guttata HOM05D006993 ORTHO05D008336 1.9e-56 223.0 199 62.8
MSTRG.18520 Avicennia marina HOM05D006993 ORTHO05D008336 8.1e-55 217.6 204 61.3
Oeu013422.3 Olea europaea HOM05D006993 ORTHO05D008336 6.0e-50 201.4 202 58.9
Oeu049571.1 Olea europaea HOM05D006993 ORTHO05D008336 7.9e-50 201.1 200 62.5
QL09p044784 Quercus lobata HOM05D006993 ORTHO05D008336 9.0e-46 187.6 190 57.9
Actinidia23138 Actinidia chinensis HOM05D006993 ORTHO05D008336 5.8e-45 184.9 202 57.4
Lsat_1_v5_gn_9_15700 Lactuca sativa HOM05D006993 ORTHO05D008336 2.9e-44 182.6 210 56.7
CSS0020795 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 8.4e-44 181.0 198 56.1
Solyc09g018890.3 Solanum lycopersicum HOM05D006993 ORTHO05D008336 1.1e-43 180.6 200 55.0
TAR626G0971 Trochodendron aralioides HOM05D006993 ORTHO05D008336 1.1e-43 180.6 178 55.6
CSS0002802 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 2.4e-43 179.5 207 55.1
Sopen09g012650 Solanum pennellii HOM05D006993 ORTHO05D008336 2.4e-43 179.5 200 57.0
GSVIVG01006115001 Vitis vinifera HOM05D006993 ORTHO05D008336 3.2e-43 179.1 166 60.8
Manes.13G058300 Manihot esculenta HOM05D006993 ORTHO05D008336 9.3e-43 177.6 204 54.4
Potri.014G172800 Populus trichocarpa HOM05D006993 ORTHO05D008336 9.3e-43 177.6 204 53.4
Gohir.A11G146100 Gossypium hirsutum HOM05D006993 ORTHO05D008336 1.2e-42 177.2 218 51.4
Gorai.007G162900 Gossypium raimondii HOM05D006993 ORTHO05D008336 1.2e-42 177.2 218 51.4
CSS0001652 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 2.7e-42 176.0 201 55.2
Prupe.5G011000 Prunus persica HOM05D006993 ORTHO05D008336 2.3e-41 172.9 178 55.6
CSS0028614 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 3.0e-41 172.6 207 54.6
CANSAT11G1969 Cannabis sativa HOM05D006993 ORTHO05D008336 3.9e-41 172.2 161 60.2
Nitab4.5_0009028g0040 Nicotiana tabacum HOM05D006993 ORTHO05D008336 3.9e-41 172.2 169 60.4
vmacro02850 Vaccinium macrocarpon HOM05D006993 ORTHO05D008336 3.9e-41 172.2 202 53.0
Sabra14G0132300 Salix brachista HOM05D006993 ORTHO05D008336 8.7e-41 171.0 205 54.1
Thecc.01G203600 Theobroma cacao HOM05D006993 ORTHO05D008336 8.7e-41 171.0 231 49.4
PGSC0003DMG400020288 Solanum tuberosum HOM05D006993 ORTHO05D008336 1.1e-40 170.6 206 53.4
ECA247G3631 Erigeron canadensis HOM05D006993 ORTHO05D008336 1.5e-40 170.2 199 55.3
ATR0751G064 Amborella trichopoda HOM05D006993 ORTHO05D008336 1.9e-40 169.9 163 60.7
Aa31sc249G30 Aethionema arabicum HOM05D006993 ORTHO05D008336 5.6e-40 168.3 156 62.2
CAN.G3.14 Capsicum annuum HOM05D006993 ORTHO05D008336 9.6e-40 167.5 208 55.3
Cpa.g.sc8.8 Carica papaya HOM05D006993 ORTHO05D008336 9.6e-40 167.5 210 52.9
MD00G1144800 Malus domestica HOM05D006993 ORTHO05D008336 9.6e-40 167.5 189 52.4
Peaxi162Scf12724g00016 Petunia axillaris HOM05D006993 ORTHO05D008336 1.3e-39 167.2 220 53.6
BcaC06g35821 Brassica carinata HOM05D006993 ORTHO05D008336 1.6e-39 166.8 154 62.3
BolC7t41517H Brassica oleracea HOM05D006993 ORTHO05D008336 1.6e-39 166.8 154 62.3
TPR.G5057 Trifolium pratense HOM05D006993 ORTHO05D008336 2.1e-39 166.4 181 56.9
AT2G04039 Arabidopsis thaliana HOM05D006993 ORTHO05D008336 2.8e-39 166.0 203 52.2
Thhalv10002670m.g Eutrema salsugineum HOM05D006993 ORTHO05D008336 2.8e-39 166.0 154 61.7
A07p06910 Brassica napus HOM05D006993 ORTHO05D008336 3.7e-39 165.6 154 62.3
BraA07t28482Z Brassica rapa HOM05D006993 ORTHO05D008336 3.7e-39 165.6 154 62.3
Cc01_g15720 Coffea canephora HOM05D006993 ORTHO05D008336 3.7e-39 165.6 210 51.9
Atru.chr6.3467 Acer truncatum HOM05D006993 ORTHO05D008336 6.2e-39 164.9 207 51.2
AL3G41710 Arabidopsis lyrata HOM05D006993 ORTHO05D008336 6.2e-39 164.9 202 52.0
C07p10500 Brassica napus HOM05D006993 ORTHO05D008336 6.2e-39 164.9 154 61.7
FAN08G3673 Fragaria x ananassa HOM05D006993 ORTHO05D008336 1.1e-38 164.1 184 51.1
FvH4_5g27060 Fragaria vesca HOM05D006993 ORTHO05D008336 1.4e-38 163.7 178 52.2
Sed0005772 Sechium edule HOM05D006993 ORTHO05D008336 1.4e-38 163.7 174 54.6
Lj2A1109T68 Lonicera japonica HOM05D006993 ORTHO05D008336 3.1e-38 162.5 113 72.6
Cfa010616 Carpinus fangiana HOM05D006993 ORTHO05D008336 4.0e-38 162.2 159 59.7
PSO675G6922 Papaver somniferum HOM05D006993 ORTHO05D008336 4.0e-38 162.2 198 50.5
Nn1g08444 Nelumbo nucifera HOM05D006993 ORTHO05D008336 5.3e-38 161.8 177 54.8
MELO3C012348.2 Cucumis melo HOM05D006993 ORTHO05D008336 9.0e-38 161.0 169 53.3
Medtr8g028100 Medicago truncatula HOM05D006993 ORTHO05D008336 9.0e-38 161.0 180 53.9
Duzib138G1606 Durio zibethinus HOM05D006993 ORTHO05D008336 1.2e-37 160.6 220 48.6
HanXRQChr08g0230791 Helianthus annuus HOM05D006993 ORTHO05D008336 1.2e-37 160.6 212 50.9
Ciclev10016771m.g Citrus clementina HOM05D006993 ORTHO05D008336 1.5e-37 160.2 189 54.5
PSO541G2665 Papaver somniferum HOM05D006993 ORTHO05D008336 2.6e-37 159.5 199 50.8
COL.COLO4_19719 Corchorus olitorius HOM05D006993 ORTHO05D008336 4.5e-37 158.7 224 49.6
Duzib211G0651 Durio zibethinus HOM05D006993 ORTHO05D008336 4.5e-37 158.7 179 53.6
Lalb_Chr17g0342261 Lupinus albus HOM05D006993 ORTHO05D008336 4.5e-37 158.7 162 54.9
Lj3g0006688 Lotus japonicus HOM05D006993 ORTHO05D008336 7.6e-37 157.9 181 53.6
CDE03G0427 Ceratophyllum demersum HOM05D006993 ORTHO05D008336 1.0e-36 157.5 158 54.4
CsaV3_5G035360 Cucumis sativus L. HOM05D006993 ORTHO05D008336 1.0e-36 157.5 169 52.1
AUR62028621 Chenopodium quinoa HOM05D006993 ORTHO05D008336 1.3e-36 157.1 169 58.0
Rhsim13G0056200 Rhododendron simsii HOM05D006570 ORTHO05D008193 1.7e-36 156.8 166 57.2
Potri.002G217400 Populus trichocarpa HOM05D006993 ORTHO05D008336 2.2e-36 156.4 198 51.0
DCAR_018599 Daucus carota HOM05D000190 ORTHO05D008336 3.8e-36 155.6 170 55.9
FAN18G3928 Fragaria x ananassa HOM05D006993 ORTHO05D008336 4.9e-36 155.2 187 49.7
CiPaw.13G058900 Carya illinoinensis HOM05D006993 ORTHO05D008336 8.4e-36 154.5 167 56.3
TWI18G0796 Tripterygium wilfordii HOM05D006993 ORTHO05D008336 8.4e-36 154.5 217 46.1
CDE06G2320 Ceratophyllum demersum HOM05D006993 ORTHO05D008336 7.1e-35 151.4 192 47.9
AUR62008046 Chenopodium quinoa HOM05D006993 ORTHO05D008336 7.1e-35 151.4 169 55.0
Ca_23580_v3 Cicer arietinum L. HOM05D006993 ORTHO05D008336 7.1e-35 151.4 180 54.4
VMungo0331G1491 Vigna mungo HOM05D006993 ORTHO05D008336 7.1e-35 151.4 183 53.6
CARHR101970 Cardamine hirsuta HOM05D006993 ORTHO05D008336 9.3e-35 151.0 110 68.2
Gohir.D07G168900 Gossypium hirsutum HOM05D006993 ORTHO05D008336 9.3e-35 151.0 207 46.9
arahy.Tifrunner.gnm1.ann1.RC1IE0 Arachis hypogaea HOM05D006993 ORTHO05D008336 1.6e-34 150.2 181 54.7
Glyma.07G059600 Glycine max HOM05D006993 ORTHO05D008336 1.6e-34 150.2 183 52.5
unitig_736.g22974 Utricularia gibba HOM05D006993 ORTHO05D008336 1.6e-34 150.2 167 52.7
BcaB06g26751 Brassica carinata HOM05D006993 ORTHO05D008336 2.7e-34 149.4 154 58.4
MD15G1141400 Malus domestica HOM05D006993 ORTHO05D008336 3.5e-34 149.1 143 55.9
MBI15_g35689_MAGBIO Magnolia biondii HOM05D006993 ORTHO05D008336 4.6e-34 148.7 168 51.8
Aqoxy4G02329 Aquilegia oxysepala HOM05D006993 ORTHO05D008336 1.3e-33 147.1 162 56.8
EL10Ac5g10566 Beta vulgaris HOM05D006993 ORTHO05D008336 1.8e-33 146.7 161 55.3
Sp3g23040 Schrenkiella parvula HOM05D006993 ORTHO05D008336 1.8e-33 146.7 110 68.2
Ah.11g050660 Amaranthus hybridus HOM05D006993 ORTHO05D008336 2.3e-33 146.4 202 46.5
Duzib133G0497 Durio zibethinus HOM05D006993 ORTHO05D008336 3.0e-33 146.0 106 69.8
Gohir.A07G162350 Gossypium hirsutum HOM05D006993 ORTHO05D008336 3.0e-33 146.0 191 48.7
Zm00001eb108910 Zea mays HOM05D006993 ORTHO05D008336 5.1e-33 145.2 155 49.7
Glyma.16G028500 Glycine max HOM05D006993 ORTHO05D008336 6.7e-33 144.8 181 52.5
Phvul.010G110000 Phaseolus vulgaris HOM05D006993 ORTHO05D008336 6.7e-33 144.8 195 49.2
RcHm_v2.0_Chr7g0218061 Rosa chinensis HOM05D006993 ORTHO05D008336 8.7e-33 144.4 177 50.3
Carub.0003s2586 Capsella rubella HOM05D006993 ORTHO05D008336 2.5e-32 142.9 103 71.8
FAN13G2105 Fragaria x ananassa HOM05D006993 ORTHO05D008336 3.3e-32 142.5 178 47.8
FAN04G3061 Fragaria x ananassa HOM05D006993 ORTHO05D008336 5.7e-32 141.7 184 46.7
PGR083G2302 Punica granatum HOM05D006993 ORTHO05D008336 5.7e-32 141.7 109 63.3
Gorai.N000700 Gossypium raimondii HOM05D006993 ORTHO05D008336 2.1e-31 139.8 196 45.9
Zm00001eb327210 Zea mays HOM05D006993 ORTHO05D008336 2.8e-31 139.4 190 46.3
Os07g0607800 Oryza sativa ssp. japonica HOM05D006993 ORTHO05D008336 8.2e-31 137.9 106 58.5
TWI36G0749 Tripterygium wilfordii HOM05D006993 ORTHO05D008336 1.5e-29 133.7 156 52.6
Eucgr.H00675 Eucalyptus grandis HOM05D006993 ORTHO05D008336 2.6e-29 132.9 205 44.9
Nitab4.5_0005967g0020 Nicotiana tabacum HOM05D006993 ORTHO05D008336 1.2e-26 124.0 215 43.7
arahy.Tifrunner.gnm1.ann1.6DX8AG Arachis hypogaea HOM05D006993 ORTHO05D008336 2.8e-23 112.8 86 64.0
ClCG05G021810 Citrullus lanatus HOM05D006993 ORTHO05D008336 8.2e-23 111.3 127 52.0
AagrBONN_evm.TU.Sc2ySwM_344.1609 Anthoceros agrestis HOM05D006993 ORTHO05D008336 5.3e-22 108.6 110 49.1
Mapoly0043s0057 Marchantia polymorpha HOM05D006993 ORTHO05D008336 6.9e-22 108.2 111 50.5
Pp3c2_17900 Physcomitrium patens HOM05D006993 ORTHO05D008336 5.0e-20 102.1 107 48.6
Psat4g158880 Pisum sativum HOM05D006993 ORTHO05D008336 4.6e-18 95.5 131 48.1
SMO111G0038 Selaginella moellendorffii HOM05D006993 ORTHO05D008336 4.6e-18 95.5 101 45.5
Ca_23571_v3 Cicer arietinum L. HOM05D006993 ORTHO05D008336 4.8e-15 85.5 127 50.4
CBR_g51823 Chara braunii HOM05D006993 ORTHO05D008336 4.2e-11 72.4 72 52.8
Gohir.D11G152300 Gossypium hirsutum HOM05D006993 ORTHO05D008336 1.2e-10 70.9 148 40.5
Haze_03547 Corylus avellana HOM05D006993 ORTHO05D008336 3.9e-09 65.9 117 47.0


User provided reference genes

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