Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow2G2954 Salvia bowleyana HOM05D007796 ORTHO05D009853 1.5e-68 262.7 130 100.0
MSTRG.9748 Avicennia marina HOM05D007796 ORTHO05D009853 1.3e-19 100.1 65 76.9
Migut.G01293 Erythranthe guttata HOM05D007796 ORTHO05D009853 1.1e-18 97.1 65 75.4
Rhsim09G0018700 Rhododendron simsii HOM05D007796 ORTHO05D009853 2.1e-14 82.8 65 60.0
CSS0002213 Camellia sinensis var. sinensis HOM05D007796 ORTHO05D009853 2.8e-14 82.4 65 63.1
CSS0009025 Camellia sinensis var. sinensis HOM05D007796 ORTHO05D009853 2.8e-14 82.4 65 63.1
unitig_0.g2392 Utricularia gibba HOM05D007796 ORTHO05D009853 2.8e-14 82.4 89 49.4
Rhsim09G0019700 Rhododendron simsii HOM05D007796 ORTHO05D009853 8.1e-14 80.9 65 58.5
Oeu022686.1 Olea europaea HOM05D007796 ORTHO05D009853 2.4e-13 79.3 57 68.4
Rhsim09G0019400 Rhododendron simsii HOM05D007796 ORTHO05D009853 2.4e-13 79.3 65 56.9
vmacro00674 Vaccinium macrocarpon HOM05D007796 ORTHO05D009853 3.1e-13 79.0 62 59.7
Actinidia27090 Actinidia chinensis HOM05D007796 ORTHO05D009853 4.0e-13 78.6 63 63.5
Gohir.A07G088800 Gossypium hirsutum HOM05D007796 ORTHO05D009853 7.6e-12 74.3 65 52.3
TPR.G5064 Trifolium pratense HOM05D007796 ORTHO05D009853 7.6e-12 74.3 67 50.7
Sopen08g004900 Solanum pennellii HOM05D007796 ORTHO05D009853 9.9e-12 73.9 65 55.4
Eucgr.H00678 Eucalyptus grandis HOM05D007796 ORTHO05D009853 1.3e-11 73.6 65 52.3
Hma1.2p1_0487F.1_g163590 Hydrangea macrophylla HOM05D007796 ORTHO05D009853 2.2e-11 72.8 67 52.2
Gohir.D07G093800 Gossypium hirsutum HOM05D007796 ORTHO05D009853 2.9e-11 72.4 65 50.8
Gorai.001G100500 Gossypium raimondii HOM05D007796 ORTHO05D009853 2.9e-11 72.4 65 50.8
Psat4g158920 Pisum sativum HOM05D007796 ORTHO05D009853 3.8e-11 72.0 67 46.3
PGR083G0658 Punica granatum HOM05D007796 ORTHO05D009853 3.8e-11 72.0 56 58.9
Thecc.01G204800 Theobroma cacao HOM05D007796 ORTHO05D009853 6.4e-11 71.2 65 52.3
Medtr8g028085 Medicago truncatula HOM05D007796 ORTHO05D009853 8.4e-11 70.9 72 44.4
Nitab4.5_0012444g0010 Nicotiana tabacum HOM05D007796 ORTHO05D009853 8.4e-11 70.9 76 50.0
Nitab4.5_0000242g0120 Nicotiana tabacum HOM05D007796 ORTHO05D009853 1.4e-10 70.1 65 55.4
Nitab4.5_0001521g0060 Nicotiana tabacum HOM05D007796 ORTHO05D009853 1.9e-10 69.7 76 50.0
Atru.chr6.3486 Acer truncatum HOM05D007796 ORTHO05D009853 5.4e-10 68.2 55 56.4
Lsat_1_v5_gn_2_38801 Lactuca sativa HOM05D007796 ORTHO05D009853 9.3e-10 67.4 56 58.9
GSVIVG01004106001 Vitis vinifera HOM05D007796 ORTHO05D009853 9.3e-10 67.4 63 52.4
COL.COLO4_04515 Corchorus olitorius HOM05D007796 ORTHO05D009853 2.7e-09 65.9 65 47.7
Lj3g0021991 Lotus japonicus HOM05D007796 ORTHO05D009853 3.5e-09 65.5 66 48.5
Peaxi162Scf00075g01546 Petunia axillaris HOM05D007796 ORTHO05D009853 3.5e-09 65.5 65 52.3
Ciclev10018341m.g Citrus clementina HOM05D007796 ORTHO05D009853 4.6e-09 65.1 55 54.5
Manes.12G058902 Manihot esculenta HOM05D007796 ORTHO05D009853 4.6e-09 65.1 65 44.6
arahy.Tifrunner.gnm1.ann1.M2QILT Arachis hypogaea HOM05D007796 ORTHO05D009853 6.0e-09 64.7 55 54.5
Ca_23572_v3 Cicer arietinum L. HOM05D007796 ORTHO05D009853 6.0e-09 64.7 55 52.7
Ca_23581_v3 Cicer arietinum L. HOM05D007796 ORTHO05D009853 6.0e-09 64.7 55 52.7
DCAR_005469 Daucus carota HOM05D007796 ORTHO05D009853 7.8e-09 64.3 54 55.6
Nn7g37568 Nelumbo nucifera HOM05D007796 ORTHO05D009853 1.0e-08 63.9 60 53.3
TWI36G1414 Tripterygium wilfordii HOM05D007796 ORTHO05D009853 1.0e-08 63.9 56 57.1
THA.LOC104822455 Tarenaya hassleriana HOM05D007796 ORTHO05D009853 1.3e-08 63.5 63 49.2
FvH4_4g06110 Fragaria vesca HOM05D007796 ORTHO05D009853 3.9e-08 62.0 54 53.7
FAN07G1080 Fragaria x ananassa HOM05D007796 ORTHO05D009853 3.9e-08 62.0 54 53.7
FAN12G2913 Fragaria x ananassa HOM05D007796 ORTHO05D009853 3.9e-08 62.0 54 53.7
FAN17G0402 Fragaria x ananassa HOM05D007796 ORTHO05D009853 3.9e-08 62.0 54 53.7
MELO3C012717.2 Cucumis melo HOM05D007796 ORTHO05D009853 5.1e-08 61.6 56 50.0
CANSAT35G1173 Cannabis sativa HOM05D007796 ORTHO05D009853 6.6e-08 61.2 56 51.8
Carub.0003s0713 Capsella rubella HOM05D007796 ORTHO05D009853 6.6e-08 61.2 65 46.2
MD16G1238500 Malus domestica HOM05D007796 ORTHO05D009853 8.7e-08 60.8 69 44.9
PSO017G5834 Papaver somniferum HOM05D007796 ORTHO05D009853 8.7e-08 60.8 56 55.4
CiPaw.13G057300 Carya illinoinensis HOM05D007796 ORTHO05D009853 1.1e-07 60.5 57 50.9
AT3G07568 Arabidopsis thaliana HOM05D007796 ORTHO05D009853 1.9e-07 59.7 55 50.9
FAN22G0383 Fragaria x ananassa HOM05D007796 ORTHO05D009853 1.9e-07 59.7 54 51.9
Manes.13G057800 Manihot esculenta HOM05D007796 ORTHO05D009853 1.9e-07 59.7 65 46.2
A05p40630 Brassica napus HOM05D007796 ORTHO05D009853 2.5e-07 59.3 65 43.1
BraA05t22794Z Brassica rapa HOM05D007796 ORTHO05D009853 2.5e-07 59.3 65 43.1
Thhalv10021850m.g Eutrema salsugineum HOM05D007796 ORTHO05D009853 2.5e-07 59.3 65 44.6
MD13G1233500 Malus domestica HOM05D007796 ORTHO05D009853 2.5e-07 59.3 69 43.5
Prupe.1G064700 Prunus persica HOM05D007796 ORTHO05D009853 2.5e-07 59.3 58 50.0
Cfa010674 Carpinus fangiana HOM05D005998 ORTHO05D007664 3.3e-07 58.9 63 44.4
Sp3g06500 Schrenkiella parvula HOM05D007796 ORTHO05D009853 4.3e-07 58.5 65 43.1
Aa31LG5G18120 Aethionema arabicum HOM05D007796 ORTHO05D009853 5.6e-07 58.2 72 43.1
BcaC05g29552 Brassica carinata HOM05D000328 ORTHO05D000191 5.6e-07 58.2 65 41.5
C05p59740 Brassica napus HOM05D007796 ORTHO05D009853 5.6e-07 58.2 65 41.5
BolC5t34628H Brassica oleracea HOM05D007796 ORTHO05D009853 5.6e-07 58.2 65 41.5
Haze_03600 Corylus avellana HOM05D007796 ORTHO05D009853 5.6e-07 58.2 56 46.4
Glyma.07G059400 Glycine max HOM05D007796 ORTHO05D009853 5.6e-07 58.2 61 45.9
AL3G18920 Arabidopsis lyrata HOM05D007796 ORTHO05D009853 7.3e-07 57.8 55 49.1
CARHR082260 Cardamine hirsuta HOM05D007796 ORTHO05D009853 7.3e-07 57.8 55 49.1
Lalb_Chr17g0342271 Lupinus albus HOM05D007796 ORTHO05D009853 1.3e-06 57.0 55 47.3
RcHm_v2.0_Chr4g0397691 Rosa chinensis HOM05D007796 ORTHO05D009853 1.6e-06 56.6 54 48.1
Cc03_g12300 Coffea canephora HOM05D007796 ORTHO05D009853 2.8e-06 55.8 63 47.6
QL09p048026 Quercus lobata HOM05D007796 ORTHO05D009853 2.8e-06 55.8 65 46.2
EL10Ac3g06021 Beta vulgaris HOM05D007796 ORTHO05D009853 3.6e-06 55.5 56 51.8
Oeu035188.1 Olea europaea HOM05D007796 ORTHO05D009853 6.2e-06 54.7 46 60.9
Cpa.g.sc8.20 Carica papaya HOM05D007796 ORTHO05D009853 8.1e-06 54.3 55 49.1


User provided reference genes

Program Settings