Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow2G2767 Salvia bowleyana HOM05D003672 ORTHO05D004121 2.3e-293 1011.5 526 100.0
Migut.L01189 Erythranthe guttata HOM05D003672 ORTHO05D004121 1.9e-82 310.8 542 44.6
Oeu004585.2 Olea europaea HOM05D003672 ORTHO05D004121 1.7e-54 218.0 475 37.9
Dinv34068 Davidia involucrata HOM05D003672 ORTHO05D004121 1.5e-53 214.9 546 35.2
GSVIVG01012221001 Vitis vinifera HOM05D003672 ORTHO05D004121 1.3e-46 191.8 627 32.7
TAR629G1848 Trochodendron aralioides HOM05D003672 ORTHO05D004121 3.0e-43 180.6 708 30.6
CSS0037619 Camellia sinensis var. sinensis HOM05D003672 ORTHO05D004121 2.6e-42 177.6 366 39.9
Actinidia31938 Actinidia chinensis HOM05D003672 ORTHO05D004121 9.8e-42 175.6 386 38.3
TAR629G0952 Trochodendron aralioides HOM05D003672 ORTHO05D004121 3.1e-40 170.6 575 33.2
Cc11_g11950 Coffea canephora HOM05D003672 ORTHO05D004121 9.2e-40 169.1 546 32.8
SGA_v2.0_scaffold36G14460 Striga asiatica HOM05D003672 ORTHO05D004121 3.5e-39 167.2 463 34.8
Nn4g23428 Nelumbo nucifera HOM05D003672 ORTHO05D004121 1.5e-37 161.8 563 31.3
Nn3g17451 Nelumbo nucifera HOM05D003672 ORTHO05D004121 3.3e-37 160.6 707 29.4
Potri.008G096100 Populus trichocarpa HOM05D003672 ORTHO05D004121 1.8e-35 154.8 493 33.3
Dinv22781 Davidia involucrata HOM05D003672 ORTHO05D004121 8.9e-35 152.5 386 36.3
Nitab4.5_0009401g0050 Nicotiana tabacum HOM05D003672 ORTHO05D004121 1.2e-34 152.1 373 32.2
Peaxi162Scf00201g00329 Petunia axillaris HOM05D003672 ORTHO05D004121 4.4e-34 150.2 634 29.7
Peaxi162Scf00175g00022 Petunia axillaris HOM05D003672 ORTHO05D004121 2.9e-33 147.5 450 30.9
Thecc.03G101900 Theobroma cacao HOM05D003672 ORTHO05D004121 3.7e-33 147.1 408 33.6
HanXRQChr09g0270231 Helianthus annuus HOM05D003672 ORTHO05D004121 4.9e-33 146.7 561 31.4
Nitab4.5_0001485g0140 Nicotiana tabacum HOM05D003672 ORTHO05D004121 4.9e-33 146.7 370 31.1
PGR102G2240 Punica granatum HOM05D003672 ORTHO05D004121 4.9e-33 146.7 490 30.0
Lsat_1_v5_gn_4_111040 Lactuca sativa HOM05D003672 ORTHO05D004121 8.3e-33 146.0 432 35.2
Lsat_1_v5_gn_8_46340 Lactuca sativa HOM05D003672 ORTHO05D004121 1.1e-32 145.6 416 34.4
Sopen03g034170 Solanum pennellii HOM05D003672 ORTHO05D004121 1.1e-32 145.6 463 30.7
Rhsim12G0074700 Rhododendron simsii HOM05D003672 ORTHO05D004121 1.4e-32 145.2 749 26.0
Solyc03g115100.4 Solanum lycopersicum HOM05D003672 ORTHO05D004121 1.8e-32 144.8 640 27.2
Lj5C102T25 Lonicera japonica HOM05D003672 ORTHO05D004121 3.2e-32 144.1 371 36.1
CARHR274750 Cardamine hirsuta HOM05D003672 ORTHO05D004121 5.4e-32 143.3 501 29.9
DCAR_023172 Daucus carota HOM05D003672 ORTHO05D004121 5.4e-32 143.3 414 34.3
Sabra08G0072400 Salix brachista HOM05D003672 ORTHO05D004121 7.0e-32 142.9 507 32.9
Hma1.2p1_0060F.1_g033090 Hydrangea macrophylla HOM05D003672 ORTHO05D004121 9.2e-32 142.5 679 29.3
Rhsim12G0075200 Rhododendron simsii HOM05D003672 ORTHO05D004121 9.2e-32 142.5 746 26.0
MSTRG.22965 Avicennia marina HOM05D003672 ORTHO05D004121 2.7e-31 141.0 393 33.8
Gorai.008G199200 Gossypium raimondii HOM05D003672 ORTHO05D004121 3.5e-31 140.6 247 42.1
Solyc05g012230.4 Solanum lycopersicum HOM05D003672 ORTHO05D004121 3.5e-31 140.6 431 31.3
Actinidia35037 Actinidia chinensis HOM05D003672 ORTHO05D004121 4.6e-31 140.2 656 29.6
Manes.01G028000 Manihot esculenta HOM05D003672 ORTHO05D004121 4.6e-31 140.2 454 30.2
Cc00_g14840 Coffea canephora HOM05D003672 ORTHO05D004121 7.8e-31 139.4 345 35.7
Gohir.A12G182700 Gossypium hirsutum HOM05D003672 ORTHO05D004121 1.0e-30 139.0 247 41.7
QL03p074186 Quercus lobata HOM05D003672 ORTHO05D004121 1.0e-30 139.0 351 35.0
Thhalv10003875m.g Eutrema salsugineum HOM05D003672 ORTHO05D004121 1.7e-30 138.3 460 29.3
Gohir.D07G073000 Gossypium hirsutum HOM05D003672 ORTHO05D004121 3.0e-30 137.5 358 33.5
Atru.chr11.1624 Acer truncatum HOM05D003672 ORTHO05D004121 3.9e-30 137.1 246 42.7
Haze_11907 Corylus avellana HOM05D003672 ORTHO05D004121 3.9e-30 137.1 415 32.3
Gorai.001G077200 Gossypium raimondii HOM05D003672 ORTHO05D004121 3.9e-30 137.1 358 33.2
Sopen05g007060 Solanum pennellii HOM05D003672 ORTHO05D004121 3.9e-30 137.1 430 31.2
arahy.Tifrunner.gnm1.ann1.03S8MC Arachis hypogaea HOM05D003672 ORTHO05D004121 5.0e-30 136.7 253 39.1
Nitab4.5_0009585g0010 Nicotiana tabacum HOM05D003672 ORTHO05D004121 5.0e-30 136.7 457 31.9
Rhsim12G0148200 Rhododendron simsii HOM05D003672 ORTHO05D004121 6.6e-30 136.3 389 34.7
Atru.chr9.577 Acer truncatum HOM05D003672 ORTHO05D004121 8.6e-30 136.0 374 32.9
ECA232G2426 Erigeron canadensis HOM05D003672 ORTHO05D004121 1.5e-29 135.2 564 32.1
Sed0002350 Sechium edule HOM05D003672 ORTHO05D004121 1.5e-29 135.2 518 30.9
arahy.Tifrunner.gnm1.ann1.R6LVKU Arachis hypogaea HOM05D003672 ORTHO05D004121 2.5e-29 134.4 400 32.0
THA.LOC104819401 Tarenaya hassleriana HOM05D003672 ORTHO05D004121 2.5e-29 134.4 600 28.3
Gohir.D12G185800 Gossypium hirsutum HOM05D003672 ORTHO05D004121 3.3e-29 134.0 290 38.3
HanXRQChr16g0502451 Helianthus annuus HOM05D003672 ORTHO05D004121 3.3e-29 134.0 548 29.2
Cfa019341 Carpinus fangiana HOM05D003672 ORTHO05D004121 4.3e-29 133.7 428 32.5
Duzib084G0362 Durio zibethinus HOM05D003672 ORTHO05D004121 4.3e-29 133.7 381 33.9
ClCG06G015630 Citrullus lanatus HOM05D003672 ORTHO05D004121 5.6e-29 133.3 244 39.3
Gohir.A07G068500 Gossypium hirsutum HOM05D003672 ORTHO05D004121 5.6e-29 133.3 358 33.2
Actinidia18990 Actinidia chinensis HOM05D003672 ORTHO05D004121 9.5e-29 132.5 253 39.9
Potri.015G057600 Populus trichocarpa HOM05D003672 ORTHO05D004121 9.5e-29 132.5 683 28.1
PGR083G2392 Punica granatum HOM05D003672 ORTHO05D004121 1.6e-28 131.7 354 34.2
CiPaw.05G125000 Carya illinoinensis HOM05D003672 ORTHO05D004121 2.1e-28 131.3 351 32.5
TPR.G12189 Trifolium pratense HOM05D003672 ORTHO05D004121 2.1e-28 131.3 385 32.7
CiPaw.12G008500 Carya illinoinensis HOM05D003672 ORTHO05D004121 2.8e-28 131.0 296 37.5
ATR0177G058 Amborella trichopoda HOM05D003672 ORTHO05D004121 3.6e-28 130.6 308 37.3
Manes.06G084700 Manihot esculenta HOM05D003672 ORTHO05D004121 3.6e-28 130.6 391 34.8
AT5G61040 Arabidopsis thaliana HOM05D003672 ORTHO05D004121 4.7e-28 130.2 617 27.1
AUR62021559 Chenopodium quinoa HOM05D003672 ORTHO05D004121 4.7e-28 130.2 640 28.6
Oeu044870.1 Olea europaea HOM05D003672 ORTHO05D004121 4.7e-28 130.2 656 26.8
Eucgr.B03149 Eucalyptus grandis HOM05D003672 ORTHO05D004121 8.0e-28 129.4 520 28.1
EL10Ac5g11131 Beta vulgaris HOM05D003672 ORTHO05D004121 1.4e-27 128.6 640 28.9
PGSC0003DMG400028369 Solanum tuberosum HOM05D003672 ORTHO05D004121 1.4e-27 128.6 239 41.0
AL8G37700 Arabidopsis lyrata HOM05D003672 ORTHO05D004121 1.8e-27 128.3 622 26.5
Manes.14G085800 Manihot esculenta HOM05D003672 ORTHO05D004121 1.8e-27 128.3 520 30.4
AUR62008531 Chenopodium quinoa HOM05D003672 ORTHO05D004121 3.1e-27 127.5 633 28.8
Haze_07732 Corylus avellana HOM05D003672 ORTHO05D004121 3.1e-27 127.5 411 32.4
Ciclev10019089m.g Citrus clementina HOM05D003672 ORTHO05D004121 4.0e-27 127.1 398 33.9
MD14G1212000 Malus domestica HOM05D003672 ORTHO05D004121 5.2e-27 126.7 245 39.2
Nitab4.5_0000231g0260 Nicotiana tabacum HOM05D003672 ORTHO05D004121 5.2e-27 126.7 249 40.6
Dinv17414 Davidia involucrata HOM05D003672 ORTHO05D004121 6.8e-27 126.3 622 30.4
CANSAT80G1081 Cannabis sativa HOM05D003672 ORTHO05D004121 8.9e-27 125.9 395 31.9
FvH4_5g13830 Fragaria vesca HOM05D003672 ORTHO05D004121 8.9e-27 125.9 247 40.5
CSS0005049 Camellia sinensis var. sinensis HOM05D003672 ORTHO05D005912 1.2e-26 125.6 395 32.2
COL.COLO4_06856 Corchorus olitorius HOM05D003672 ORTHO05D004121 1.5e-26 125.2 244 38.9
FAN18G3332 Fragaria x ananassa HOM05D003672 ORTHO05D004121 1.5e-26 125.2 247 40.1
Sp2g24340 Schrenkiella parvula HOM05D003672 ORTHO05D004121 3.4e-26 124.0 466 29.4
Carub.0008s2173 Capsella rubella HOM05D003672 ORTHO05D004121 5.8e-26 123.2 617 26.1
Duzib205G1655 Durio zibethinus HOM05D003672 ORTHO05D004121 7.5e-26 122.9 249 37.8
Glyma.06G203700 Glycine max HOM05D003672 ORTHO05D004121 7.5e-26 122.9 368 30.7
BraA10t44910Z Brassica rapa HOM05D003672 ORTHO05D004121 9.8e-26 122.5 417 30.2
Migut.D01656 Erythranthe guttata HOM05D003672 ORTHO05D004121 9.8e-26 122.5 375 32.3
Lj1g0027425 Lotus japonicus HOM05D003672 ORTHO05D004121 1.3e-25 122.1 383 28.7
QL03p074101 Quercus lobata HOM05D003672 ORTHO05D004121 1.3e-25 122.1 426 31.7
Ca_14345_v3 Cicer arietinum L. HOM05D003672 ORTHO05D004121 2.2e-25 121.3 389 32.6
ECA233G1662 Erigeron canadensis HOM05D000677 ORTHO05D000727 2.2e-25 121.3 421 29.5
Psat2g037720 Pisum sativum HOM05D003672 ORTHO05D004121 3.7e-25 120.6 381 32.3
PGSC0003DMG400024637 Solanum tuberosum HOM05D003672 ORTHO05D004121 3.7e-25 120.6 382 30.1
Ah.02g114040 Amaranthus hybridus HOM05D003672 ORTHO05D004121 4.9e-25 120.2 646 28.5
BcaC06g33181 Brassica carinata HOM05D003672 ORTHO05D004121 4.9e-25 120.2 601 27.5
CsaV3_1G002930 Cucumis sativus L. HOM05D003672 ORTHO05D004121 4.9e-25 120.2 379 31.9
FAN13G1740 Fragaria x ananassa HOM05D003672 ORTHO05D004121 6.4e-25 119.8 247 39.3
Thhalv10013089m.g Eutrema salsugineum HOM05D003672 ORTHO05D004121 8.3e-25 119.4 436 28.9
Zm00001eb136280 Zea mays HOM05D003672 ORTHO05D004121 1.1e-24 119.0 366 32.8
Eucgr.B00592 Eucalyptus grandis HOM05D003672 ORTHO05D004121 1.4e-24 118.6 433 30.0
Prupe.5G205200 Prunus persica HOM05D003672 ORTHO05D004121 1.9e-24 118.2 220 40.5
TWI60G1197 Tripterygium wilfordii HOM05D003672 ORTHO05D004121 1.9e-24 118.2 414 30.0
Aqoxy1G00151 Aquilegia oxysepala HOM05D003672 ORTHO05D004121 2.4e-24 117.9 376 31.4
MELO3C017225.2 Cucumis melo HOM05D003672 ORTHO05D004121 4.1e-24 117.1 438 29.2
GSVIVG01007866001 Vitis vinifera HOM05D003672 ORTHO05D004121 4.1e-24 117.1 400 30.2
Oeu061164.2 Olea europaea HOM05D003672 ORTHO05D004121 5.4e-24 116.7 356 30.6
CDE07G1307 Ceratophyllum demersum HOM05D003672 ORTHO05D004121 7.0e-24 116.3 372 31.2
arahy.Tifrunner.gnm1.ann1.SKH1UB Arachis hypogaea HOM05D003672 ORTHO05D004121 9.2e-24 115.9 234 37.6
BraA03t13796Z Brassica rapa HOM05D003672 ORTHO05D004121 1.2e-23 115.5 602 28.1
Lj4g0018287 Lotus japonicus HOM05D003672 ORTHO05D004121 1.2e-23 115.5 344 32.6
arahy.Tifrunner.gnm1.ann1.N0JE3Z Arachis hypogaea HOM05D003672 ORTHO05D004121 1.6e-23 115.2 234 37.6
Cpa.g.sc94.57 Carica papaya HOM05D003672 ORTHO05D004121 1.6e-23 115.2 360 31.1
VMungo0331G1159 Vigna mungo HOM05D003672 ORTHO05D004121 1.6e-23 115.2 252 34.9
Os12g0576300 Oryza sativa ssp. japonica HOM05D003672 ORTHO05D004121 2.0e-23 114.8 388 29.9
QL10p019524 Quercus lobata HOM05D003672 ORTHO05D004121 2.0e-23 114.8 432 30.1
A10p28610 Brassica napus HOM05D003672 ORTHO05D004121 3.5e-23 114.0 409 27.9
CAN.G3169.1 Capsicum annuum HOM05D002946 ORTHO05D003299 3.5e-23 114.0 261 34.5
Glyma.04G162600 Glycine max HOM05D003672 ORTHO05D004121 4.6e-23 113.6 397 30.5
Zm00001eb029540 Zea mays HOM05D003672 ORTHO05D004121 4.6e-23 113.6 414 31.9
Lalb_Chr07g0178301 Lupinus albus HOM05D003672 ORTHO05D004121 7.8e-23 112.8 286 35.3
vmacro16495 Vaccinium macrocarpon HOM05D003672 ORTHO05D004121 7.8e-23 112.8 679 26.7
Carub.0006s0690 Capsella rubella HOM05D003672 ORTHO05D004121 1.0e-22 112.5 596 27.9
C07p44780 Brassica napus HOM05D003672 ORTHO05D004121 1.3e-22 112.1 599 27.4
Phvul.010G007200 Phaseolus vulgaris HOM05D003672 ORTHO05D004121 1.3e-22 112.1 361 30.7
PSO478G1233 Papaver somniferum HOM05D003672 ORTHO05D004121 2.3e-22 111.3 407 29.0
Aa31LG3G18520 Aethionema arabicum HOM05D003672 ORTHO05D004121 3.0e-22 110.9 217 37.8
FAN08G3423 Fragaria x ananassa HOM05D003672 ORTHO05D004121 3.9e-22 110.5 266 36.5
Sabra15G0083600 Salix brachista HOM05D003672 ORTHO05D004121 5.0e-22 110.2 445 28.8
AL6G18360 Arabidopsis lyrata HOM05D003672 ORTHO05D004121 6.6e-22 109.8 598 26.8
HPP92_007830 Vanilla planifolia HOM05D003672 ORTHO05D004121 6.6e-22 109.8 421 29.0
CDE04G0191 Ceratophyllum demersum HOM05D003672 ORTHO05D004121 2.5e-21 107.8 348 30.2
MBI16_g38067_MAGBIO Magnolia biondii HOM05D003672 ORTHO05D004121 3.3e-21 107.5 373 31.4
Hund09914 Selenicereus undatus HOM05D003672 ORTHO05D004121 3.3e-21 107.5 661 27.8
BcaB08g37298 Brassica carinata HOM05D003672 ORTHO05D004121 4.3e-21 107.1 367 32.2
RcHm_v2.0_Chr7g0183101 Rosa chinensis HOM05D003672 ORTHO05D004121 5.6e-21 106.7 222 37.8
CARHR205170 Cardamine hirsuta HOM05D003672 ORTHO05D004121 9.5e-21 105.9 439 29.6
CiPaw.11G053900 Carya illinoinensis HOM05D003672 ORTHO05D004121 1.2e-20 105.5 436 29.1
Lalb_Chr13g0302861 Lupinus albus HOM05D003672 ORTHO05D004121 1.2e-20 105.5 288 33.7
Hund02585 Selenicereus undatus HOM05D003672 ORTHO05D004121 1.2e-20 105.5 411 30.7
CAN.G1228.24 Capsicum annuum HOM05D003672 ORTHO05D004121 2.1e-20 104.8 319 30.4
PSO017G3206 Papaver somniferum HOM05D003672 ORTHO05D004121 2.1e-20 104.8 417 27.8
HanXRQChr12g0363081 Helianthus annuus HOM05D003672 ORTHO05D004121 3.6e-20 104.0 413 27.6
Medtr3g025870 Medicago truncatula HOM05D003672 ORTHO05D004121 3.6e-20 104.0 437 29.3
SalBow7G3172 Salvia bowleyana HOM05D003672 ORTHO05D004121 4.7e-20 103.6 375 30.9
SGA_v2.0_scaffold25G10960 Striga asiatica HOM05D003672 ORTHO05D004121 4.7e-20 103.6 377 30.8
AT5G08010 Arabidopsis thaliana HOM05D003672 ORTHO05D004121 6.2e-20 103.2 427 27.9
Sed0025785 Sechium edule HOM05D003672 ORTHO05D004121 8.1e-20 102.8 468 28.0
unitig_749.g13432 Utricularia gibba HOM05D003672 ORTHO05D004121 8.1e-20 102.8 353 30.6
Ciclev10033781m.g Citrus clementina HOM05D003672 ORTHO05D004121 1.8e-19 101.7 445 28.5
Ah.11g047770 Amaranthus hybridus HOM05D003672 ORTHO05D004121 3.1e-19 100.9 666 24.6
Glyma.05G021000 Glycine max HOM05D003672 ORTHO05D004121 1.2e-18 99.0 342 30.1
SEGI_35614 Sequoiadendron giganteum HOM05D003672 ORTHO05D004121 1.2e-18 99.0 256 34.4
A03p46740 Brassica napus HOM05D003672 ORTHO05D004121 2.6e-18 97.8 602 27.6
SEGI_10408 Sequoiadendron giganteum HOM05D003672 ORTHO05D004121 3.4e-18 97.4 211 37.0
BolC7t45002H Brassica oleracea HOM05D003672 ORTHO05D004121 4.4e-18 97.1 606 25.9
Phvul.003G184800 Phaseolus vulgaris HOM05D003672 ORTHO05D004121 4.4e-18 97.1 232 31.9
vmacro01315 Vaccinium macrocarpon HOM05D003672 ORTHO05D004121 1.1e-16 92.4 504 26.6
ClCG04G011810 Citrullus lanatus HOM05D003672 ORTHO05D004121 1.4e-16 92.0 462 27.3
TWI81G0716 Tripterygium wilfordii HOM05D003672 ORTHO05D004121 1.4e-16 92.0 414 28.0
CsaV3_1G005970 Cucumis sativus L. HOM05D003672 ORTHO05D004121 9.2e-16 89.4 454 28.4
Sp6g34930 Schrenkiella parvula HOM05D003672 ORTHO05D004121 2.1e-15 88.2 436 26.4
C09p68900 Brassica napus HOM05D003672 ORTHO05D004121 1.3e-14 85.5 588 24.3
BolC9t59636H Brassica oleracea HOM05D003672 ORTHO05D004121 1.7e-14 85.1 588 25.2
Aa31LG11G2260 Aethionema arabicum HOM05D003672 ORTHO05D004121 2.3e-14 84.7 562 27.2
TWI15G0151 Tripterygium wilfordii HOM05D003672 ORTHO05D004121 1.1e-13 82.4 278 30.6
MSTRG.7745 Avicennia marina HOM05D003672 ORTHO05D004121 1.5e-13 82.0 60 65.0
Sc12g0007260 Simmondsia chinensis HOM05D003672 ORTHO05D004121 3.3e-13 80.9 440 26.4
MELO3C002028.2 Cucumis melo HOM05D003672 ORTHO05D004121 5.6e-13 80.1 240 31.2
HPP92_000460 Vanilla planifolia HOM05D003672 ORTHO05D004121 2.8e-12 77.8 416 27.9
Lj5A435T21 Lonicera japonica HOM05D003672 ORTHO05D004121 3.1e-11 74.3 368 28.3
Actinidia19914 Actinidia chinensis HOM05D000020 ORTHO05D000156 1.7e-09 68.6 115 40.9
BcaB08g37300 Brassica carinata HOM05D003672 ORTHO05D004121 2.2e-09 68.2 233 30.0
CAN.G1228.26 Capsicum annuum HOM05D003672 ORTHO05D004121 6.4e-09 66.6 430 25.6
VMungo1215G2632 Vigna mungo HOM05D003672 ORTHO05D004121 8.4e-09 66.2 416 25.7
AagrBONN_evm.TU.Sc2ySwM_228.3362 Anthoceros agrestis HOM05D018912 ORTHO05D021275 3.5e-07 60.8 266 26.3
MBI16_g36263_MAGBIO Magnolia biondii HOM05D003672 ORTHO05D004121 2.3e-06 58.2 230 29.1
CANSAT39G0004 Cannabis sativa HOM05D003672 ORTHO05D004121 8.6e-06 56.2 205 31.7


User provided reference genes

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