Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow2G2693 Salvia bowleyana HOM05D005577 ORTHO05D006941 1.3e-282 975.7 489 100.0
MSTRG.487 Avicennia marina HOM05D005577 ORTHO05D006941 4.1e-228 794.7 447 88.4
Migut.K00987 Erythranthe guttata HOM05D005577 ORTHO05D006941 6.0e-227 790.8 449 86.6
CSS0033060 Camellia sinensis var. sinensis HOM05D005577 ORTHO05D006941 2.2e-213 745.7 455 81.8
GSVIVG01029087001 Vitis vinifera HOM05D005577 ORTHO05D006941 6.4e-213 744.2 450 81.6
Peaxi162Scf00128g01539 Petunia axillaris HOM05D005577 ORTHO05D006941 7.1e-212 740.7 449 81.3
TAR629G1549 Trochodendron aralioides HOM05D005577 ORTHO05D006941 7.1e-212 740.7 449 81.5
Rhsim12G0094300 Rhododendron simsii HOM05D005577 ORTHO05D006941 3.5e-211 738.4 459 79.1
Cc11_g17150 Coffea canephora HOM05D005577 ORTHO05D006941 6.0e-211 737.6 449 82.0
Sopen04g017360 Solanum pennellii HOM05D005577 ORTHO05D006941 6.6e-210 734.2 452 80.5
Nitab4.5_0008235g0010 Nicotiana tabacum HOM05D005577 ORTHO05D006941 9.6e-209 730.3 445 80.9
Dinv11687 Davidia involucrata HOM05D005577 ORTHO05D006941 1.3e-208 729.9 445 81.1
Nitab4.5_0001010g0020 Nicotiana tabacum HOM05D005577 ORTHO05D006941 2.1e-208 729.2 445 80.9
Sc11g0000360 Simmondsia chinensis HOM05D005577 ORTHO05D006941 2.8e-208 728.8 450 80.4
CSS0039862 Camellia sinensis var. sinensis HOM05D005577 ORTHO05D006941 3.6e-208 728.4 454 80.2
Hund25478 Selenicereus undatus HOM05D005577 ORTHO05D006941 1.4e-207 726.5 453 79.2
Nn3g16413 Nelumbo nucifera HOM05D005577 ORTHO05D006941 3.1e-207 725.3 453 79.7
Oeu058914.1 Olea europaea HOM05D005577 ORTHO05D006941 3.1e-207 725.3 466 77.3
SGA_v2.0_scaffold114G31915 Striga asiatica HOM05D005577 ORTHO05D006941 3.1e-207 725.3 461 79.6
Cfa009383 Carpinus fangiana HOM05D005577 ORTHO05D006941 2.6e-206 722.2 455 78.5
Ciclev10031511m.g Citrus clementina HOM05D005577 ORTHO05D006941 2.2e-205 719.2 450 77.8
Haze_12444 Corylus avellana HOM05D005577 ORTHO05D006941 2.2e-205 719.2 479 75.4
CiPaw.06G104800 Carya illinoinensis HOM05D005577 ORTHO05D006941 2.9e-205 718.8 449 78.4
TWI36G1278 Tripterygium wilfordii HOM05D005577 ORTHO05D006941 1.1e-204 716.8 453 78.1
DCAR_024669 Daucus carota HOM05D005577 ORTHO05D006941 1.4e-204 716.5 480 74.8
Lj6A829T30 Lonicera japonica HOM05D005577 ORTHO05D006941 1.4e-204 716.5 481 75.3
QL03p051875 Quercus lobata HOM05D005577 ORTHO05D006941 1.4e-204 716.5 461 76.8
Manes.13G009300 Manihot esculenta HOM05D005577 ORTHO05D006941 1.9e-204 716.1 453 78.4
EL10Ac6g13532 Beta vulgaris HOM05D005577 ORTHO05D006941 2.4e-204 715.7 453 77.7
Duzib248G1391 Durio zibethinus HOM05D005577 ORTHO05D006941 9.3e-204 713.8 450 78.9
Potri.003G169300 Populus trichocarpa HOM05D005577 ORTHO05D006941 1.2e-203 713.4 454 78.0
Manes.12G008900 Manihot esculenta HOM05D005577 ORTHO05D006941 1.6e-203 713.0 453 78.4
Gohir.A03G117000 Gossypium hirsutum HOM05D005577 ORTHO05D006941 2.7e-203 712.2 449 78.0
Gorai.005G164500 Gossypium raimondii HOM05D005577 ORTHO05D006941 3.9e-202 708.4 449 77.7
TWI75G1135 Tripterygium wilfordii HOM05D005577 ORTHO05D006941 3.9e-202 708.4 453 78.1
Gohir.D02G146900 Gossypium hirsutum HOM05D005577 ORTHO05D006941 5.1e-202 708.0 449 77.7
Eucgr.H04616 Eucalyptus grandis HOM05D005577 ORTHO05D006941 1.1e-201 706.8 454 75.6
Thecc.02G202700 Theobroma cacao HOM05D005577 ORTHO05D006941 1.5e-201 706.4 450 77.3
Glyma.05G148900 Glycine max HOM05D005577 ORTHO05D006941 7.3e-201 704.1 456 76.1
Solyc04g045530.4 Solanum lycopersicum HOM05D005577 ORTHO05D006941 9.6e-201 703.7 431 81.0
Hma1.2p1_0065F.1_g035160 Hydrangea macrophylla HOM05D005577 ORTHO05D006941 2.1e-200 702.6 447 78.3
Aqoxy5G03309 Aquilegia oxysepala HOM05D005577 ORTHO05D006941 1.8e-199 699.5 450 76.0
ATR0561G025 Amborella trichopoda HOM05D005577 ORTHO05D006941 5.3e-199 698.0 449 74.6
unitig_699.g19962 Utricularia gibba HOM05D005577 ORTHO05D006941 1.2e-198 696.8 483 73.1
CANSAT01G0699 Cannabis sativa HOM05D005577 ORTHO05D006941 2.6e-198 695.7 450 76.4
COL.COLO4_20442 Corchorus olitorius HOM05D005577 ORTHO05D006941 2.6e-198 695.7 450 77.1
Medtr8g097160 Medicago truncatula HOM05D005577 ORTHO05D006941 2.6e-198 695.7 451 75.8
FAN07G0551 Fragaria x ananassa HOM05D005577 ORTHO05D006941 3.4e-198 695.3 442 77.6
MD13G1121900 Malus domestica HOM05D005577 ORTHO05D006941 5.8e-198 694.5 450 76.0
FAN22G0128 Fragaria x ananassa HOM05D005577 ORTHO05D006941 7.6e-198 694.1 442 77.4
FAN12G2046 Fragaria x ananassa HOM05D005577 ORTHO05D006941 9.9e-198 693.7 450 75.6
Glyma.08G105600 Glycine max HOM05D005577 ORTHO05D006941 2.2e-197 692.6 456 74.6
Zm00001eb421110 Zea mays HOM05D005577 ORTHO05D006941 2.9e-197 692.2 456 72.8
Phvul.L003546 Phaseolus vulgaris HOM05D005577 ORTHO05D006941 3.8e-197 691.8 456 74.1
RcHm_v2.0_Chr4g0418271 Rosa chinensis HOM05D005577 ORTHO05D006941 6.4e-197 691.0 442 77.6
TPR.G26572 Trifolium pratense HOM05D005577 ORTHO05D006941 1.1e-196 690.3 455 74.7
CsaV3_6G008170 Cucumis sativus L. HOM05D005577 ORTHO05D006941 1.4e-196 689.9 449 74.8
Ca_18016_v3 Cicer arietinum L. HOM05D005577 ORTHO05D006941 9.3e-196 687.2 455 74.5
Os07g0406800 Oryza sativa ssp. japonica HOM05D005577 ORTHO05D006941 1.2e-195 686.8 453 73.3
Lalb_Chr07g0187001 Lupinus albus HOM05D005577 ORTHO05D006941 2.7e-195 685.6 448 74.6
Sed0021319 Sechium edule HOM05D005577 ORTHO05D006941 3.9e-194 681.8 443 74.5
Thhalv10018528m.g Eutrema salsugineum HOM05D005577 ORTHO05D006941 6.7e-194 681.0 448 73.0
Lsat_1_v5_gn_2_63520 Lactuca sativa HOM05D005577 ORTHO05D006941 1.1e-193 680.2 449 75.3
arahy.Tifrunner.gnm1.ann1.HTD3J8 Arachis hypogaea HOM05D005577 ORTHO05D006941 1.5e-193 679.9 455 73.6
arahy.Tifrunner.gnm1.ann1.V9CB21 Arachis hypogaea HOM05D005577 ORTHO05D006941 1.5e-193 679.9 459 73.0
HPP92_020263 Vanilla planifolia HOM05D005577 ORTHO05D006941 1.5e-193 679.9 448 73.2
HanXRQChr12g0357271 Helianthus annuus HOM05D005577 ORTHO05D006941 1.9e-193 679.5 449 74.2
BcaB03g15345 Brassica carinata HOM05D005577 ORTHO05D006941 1.3e-192 676.8 449 72.2
HanXRQChr12g0354651 Helianthus annuus HOM05D005577 ORTHO05D006941 1.3e-192 676.8 449 73.9
Lj4g0002319 Lotus japonicus HOM05D005577 ORTHO05D006941 3.7e-192 675.2 457 74.0
Sp5g22260 Schrenkiella parvula HOM05D005577 ORTHO05D006941 3.7e-192 675.2 449 72.2
Ah.03g135990 Amaranthus hybridus HOM05D005577 ORTHO05D006941 4.0e-191 671.8 449 74.2
BraA07t30887Z Brassica rapa HOM05D005577 ORTHO05D006941 1.2e-190 670.2 468 69.4
A02p14150 Brassica napus HOM05D005577 ORTHO05D006941 2.0e-190 669.5 449 71.7
Carub.0002s1360 Capsella rubella HOM05D005577 ORTHO05D006941 2.0e-190 669.5 449 71.0
C02p22860 Brassica napus HOM05D005577 ORTHO05D006941 2.6e-190 669.1 449 71.7
ECA233G0246 Erigeron canadensis HOM05D005577 ORTHO05D006941 2.6e-190 669.1 438 74.7
AL2G25840 Arabidopsis lyrata HOM05D005577 ORTHO05D006941 2.2e-189 666.0 447 71.1
AT1G67320 Arabidopsis thaliana HOM05D005577 ORTHO05D006941 2.2e-189 666.0 449 71.3
A07p32630 Brassica napus HOM05D005577 ORTHO05D006941 6.5e-189 664.5 460 70.2
CARHR059800 Cardamine hirsuta HOM05D005577 ORTHO05D006941 1.9e-188 662.9 438 72.1
THA.LOC104807138 Tarenaya hassleriana HOM05D005577 ORTHO05D006941 1.9e-188 662.9 449 71.9
PSO017G5787 Papaver somniferum HOM05D005577 ORTHO05D006941 2.5e-188 662.5 454 71.1
BolC2t08435H Brassica oleracea HOM05D005577 ORTHO05D006941 7.1e-188 661.0 469 69.1
Sabra03G0124100 Salix brachista HOM05D005577 ORTHO05D006941 2.1e-187 659.4 494 69.4
BraA02t06478Z Brassica rapa HOM05D005577 ORTHO05D006941 2.7e-187 659.1 478 67.6
CAN.G97.33 Capsicum annuum HOM05D005577 ORTHO05D006941 2.7e-187 659.1 453 73.7
vmacro17973 Vaccinium macrocarpon HOM05D005577 ORTHO05D006941 1.8e-186 656.4 499 69.1
Actinidia09628 Actinidia chinensis HOM05D005577 ORTHO05D006941 2.3e-186 656.0 408 78.9
CDE05G3041 Ceratophyllum demersum HOM05D005577 ORTHO05D006941 1.5e-185 653.3 470 69.4
THA.LOC104825491 Tarenaya hassleriana HOM05D005577 ORTHO05D006941 2.1e-184 649.4 454 70.5
Prupe.1G223400 Prunus persica HOM05D005577 ORTHO05D006941 4.5e-182 641.7 449 72.6
SEGI_29210 Sequoiadendron giganteum HOM05D005577 ORTHO05D006941 7.2e-180 634.4 459 68.2
MELO3C022319.2 Cucumis melo HOM05D005577 ORTHO05D006941 1.6e-179 633.3 414 75.1
ClCG06G002100 Citrullus lanatus HOM05D005577 ORTHO05D006941 1.6e-176 623.2 427 72.1
BcaC03g14832 Brassica carinata HOM05D005577 ORTHO05D006941 4.5e-174 615.1 413 72.2
QL02p017501 Quercus lobata HOM05D005577 ORTHO05D006941 5.5e-172 608.2 418 72.7
Zm00001eb407100 Zea mays HOM05D005577 ORTHO05D006941 7.2e-172 607.8 392 74.5
FvH4_4g14550 Fragaria vesca HOM05D005577 ORTHO05D006941 2.6e-166 589.3 374 77.8
AUR62028904 Chenopodium quinoa HOM05D005577 ORTHO05D006941 6.5e-165 584.7 469 65.2
AUR62005646 Chenopodium quinoa HOM05D005577 ORTHO05D006941 1.9e-164 583.2 453 66.2
Aa31LG2G15630 Aethionema arabicum HOM05D005577 ORTHO05D006941 2.5e-164 582.8 458 63.8
Cpa.g.sc43.82 Carica papaya HOM05D005577 ORTHO05D006941 4.2e-164 582.0 450 66.4
Hma1.2p1_0065F.1_g035170 Hydrangea macrophylla HOM05D005577 ORTHO05D006941 8.0e-155 551.2 320 83.4
AagrBONN_evm.TU.Sc2ySwM_362.1325 Anthoceros agrestis HOM05D005577 ORTHO05D006941 1.5e-153 547.0 426 62.4
Mapoly0051s0085 Marchantia polymorpha HOM05D005577 ORTHO05D006941 3.7e-152 542.3 449 58.8
SMO340G0130 Selaginella moellendorffii HOM05D005577 ORTHO05D006941 1.0e-149 534.3 430 61.4
CBR_g45479 Chara braunii HOM05D005577 ORTHO05D006941 6.1e-147 525.0 430 59.5
Pp3c17_16180 Physcomitrium patens HOM05D005577 ORTHO05D006941 1.8e-146 523.5 439 56.7
BcaB05g24262 Brassica carinata HOM05D005577 ORTHO05D006941 1.6e-131 473.8 455 57.4
Psat7g076760 Pisum sativum HOM05D005577 ORTHO05D006941 1.2e-129 467.6 277 79.4
TAR371G1028 Trochodendron aralioides HOM05D005577 ORTHO05D006941 2.3e-114 416.8 450 54.7
MCO02G430 Micromonas commoda HOM05D005577 ORTHO05D006941 2.2e-112 410.2 434 46.5
PRCOL_00003669 Prasinoderma coloniale HOM05D005577 ORTHO05D006941 5.1e-109 399.1 430 49.1
QL03p057485 Quercus lobata HOM05D005577 ORTHO05D006941 1.6e-99 367.5 367 56.4
MD09G1083700 Malus domestica HOM05D005577 ORTHO05D006941 2.6e-97 360.1 316 59.5
Aqoxy7G01339 Aquilegia oxysepala HOM05D005577 ORTHO05D006941 3.3e-92 343.2 182 90.1
Cre06.g293000 Chlamydomonas reinhardtii HOM05D005577 ORTHO05D006941 2.1e-83 313.9 485 36.9
MD16G1122200 Malus domestica HOM05D005577 ORTHO05D006941 4.5e-57 226.5 335 41.8
Psat7g076800 Pisum sativum HOM05D005577 ORTHO05D006941 8.5e-56 222.2 188 64.9
Atru.chr11.2352 Acer truncatum HOM05D005577 ORTHO05D006941 1.4e-55 221.5 108 93.5
RcHm_v2.0_Chr4g0417261 Rosa chinensis HOM05D005577 ORTHO05D006941 1.8e-53 214.5 377 40.6
Dinv17584 Davidia involucrata HOM05D005577 ORTHO05D006941 1.4e-45 188.3 387 37.0
Atru.chr11.2354 Acer truncatum HOM05D005577 ORTHO05D006941 1.7e-43 181.4 126 73.0
Atru.chr11.2353 Acer truncatum HOM05D005577 ORTHO05D006941 2.5e-39 167.5 124 70.2
RcHm_v2.0_Chr4g0417231 Rosa chinensis HOM05D005577 ORTHO05D006941 2.5e-39 167.5 137 65.7
SHI17983 Sapria himalayana HOM05D005577 ORTHO05D006941 3.4e-28 130.6 102 66.7
SHI17980 Sapria himalayana HOM05D005577 ORTHO05D006941 5.7e-28 129.8 88 63.6
Lsat_1_v5_gn_0_16180 Lactuca sativa HOM05D005577 ORTHO05D006941 3.1e-26 124.0 127 51.2
Potri.017G053801 Populus trichocarpa HOM05D005577 ORTHO05D006941 8.5e-24 115.9 83 68.7
QL10p065845 Quercus lobata HOM05D000176 ORTHO05D000106 2.6e-20 104.4 148 47.3
MCO16G135 Micromonas commoda HOM05D005577 ORTHO05D267611 4.4e-20 103.6 207 30.9
A10p10750 Brassica napus HOM05D005577 ORTHO05D006941 2.2e-19 101.3 67 64.2
MD16G1122100 Malus domestica HOM05D005577 ORTHO05D006941 1.6e-17 95.1 71 62.0
RcHm_v2.0_Chr4g0417241 Rosa chinensis HOM05D005577 ORTHO05D006941 1.0e-16 92.4 69 66.7
SHI17981 Sapria himalayana HOM05D005577 ORTHO05D006941 5.6e-15 86.7 56 76.8
SHI17982 Sapria himalayana HOM05D005577 ORTHO05D006941 5.6e-15 86.7 66 63.6
Duzib268G0110 Durio zibethinus HOM05D005577 ORTHO05D006941 8.9e-13 79.3 102 48.0


User provided reference genes

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