Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow2G2687 Salvia bowleyana HOM05D007489 ORTHO05D008037 1.6e-115 419.5 217 100.0
SalBow6G3268 Salvia bowleyana HOM05D007489 ORTHO05D008037 9.6e-36 154.5 166 59.0
SalBow6G6000 Salvia bowleyana HOM05D007489 ORTHO05D008037 9.6e-36 154.5 166 59.0
SalBow1G4805 Salvia bowleyana HOM05D007489 ORTHO05D008037 1.1e-34 151.0 89 91.0
Migut.J01535 Erythranthe guttata HOM05D007489 ORTHO05D008037 5.9e-17 92.0 135 39.3
SGA_v2.0_scaffold66G22379 Striga asiatica HOM05D007489 ORTHO05D008037 5.0e-16 89.0 60 73.3
Rhsim02G0140400 Rhododendron simsii HOM05D007489 ORTHO05D008037 7.9e-14 81.6 68 55.9
Sc05g0007220 Simmondsia chinensis HOM05D007489 ORTHO05D008037 2.3e-13 80.1 67 55.2
MD10G1283800 Malus domestica HOM05D007489 ORTHO05D008037 5.1e-13 79.0 135 40.0
Sabra11G0045300 Salix brachista HOM05D007489 ORTHO05D008037 5.1e-13 79.0 65 55.4
Duzib235G0638 Durio zibethinus HOM05D007489 ORTHO05D008037 6.7e-13 78.6 128 36.7
GSVIVG01021171001 Vitis vinifera HOM05D007489 ORTHO05D008037 8.8e-13 78.2 69 50.7
Atru.chr10.1727 Acer truncatum HOM05D007489 ORTHO05D008037 1.1e-12 77.8 67 52.2
C01p12440 Brassica napus HOM05D010718 ORTHO05D008037 1.1e-12 77.8 59 61.0
MBI06_g31402_MAGBIO Magnolia biondii HOM05D007489 ORTHO05D008037 1.1e-12 77.8 59 62.7
Ciclev10017982m.g Citrus clementina HOM05D007489 ORTHO05D008037 2.0e-12 77.0 144 34.7
FvH4_5g26040 Fragaria vesca HOM05D007489 ORTHO05D008037 2.0e-12 77.0 69 50.7
FAN04G2784 Fragaria x ananassa HOM05D007489 ORTHO05D008037 2.0e-12 77.0 69 50.7
FAN08G0692 Fragaria x ananassa HOM05D007489 ORTHO05D008037 2.0e-12 77.0 69 50.7
FAN18G0613 Fragaria x ananassa HOM05D007489 ORTHO05D008037 2.0e-12 77.0 69 50.7
A01p10500 Brassica napus HOM05D010718 ORTHO05D008037 2.6e-12 76.6 59 59.3
BraA01t00996Z Brassica rapa HOM05D010718 ORTHO05D008037 2.6e-12 76.6 122 39.3
Thhalv10024499m.g Eutrema salsugineum HOM05D010718 ORTHO05D008037 2.6e-12 76.6 59 59.3
A03p51330 Brassica napus HOM05D010718 ORTHO05D008037 3.3e-12 76.3 122 38.5
BraA03t14214Z Brassica rapa HOM05D010718 ORTHO05D008037 3.3e-12 76.3 122 38.5
BcaNung02709 Brassica carinata HOM05D010718 ORTHO05D008037 4.4e-12 75.9 122 41.8
QL05p044409 Quercus lobata HOM05D007489 ORTHO05D008037 4.4e-12 75.9 64 57.8
BcaC06g30581 Brassica carinata HOM05D010718 ORTHO05D008037 5.7e-12 75.5 59 59.3
Duzib192G0524 Durio zibethinus HOM05D007489 ORTHO05D008037 5.7e-12 75.5 89 42.7
Nn1g09012 Nelumbo nucifera HOM05D007489 ORTHO05D008037 5.7e-12 75.5 62 58.1
Potri.011G063500 Populus trichocarpa HOM05D007489 ORTHO05D008037 5.7e-12 75.5 63 52.4
CANSAT54G0123 Cannabis sativa HOM05D007489 ORTHO05D008037 7.4e-12 75.1 64 53.1
Peaxi162Scf00223g01419 Petunia axillaris HOM05D007489 ORTHO05D008037 7.4e-12 75.1 70 54.3
RcHm_v2.0_Chr7g0215591 Rosa chinensis HOM05D007489 ORTHO05D008037 7.4e-12 75.1 63 52.4
RcHm_v2.0_Chr7g0216741 Rosa chinensis HOM05D007489 ORTHO05D008037 7.4e-12 75.1 78 46.2
Thecc.06G175600 Theobroma cacao HOM05D007489 ORTHO05D008037 7.4e-12 75.1 58 56.9
MD05G1304700 Malus domestica HOM05D007489 ORTHO05D008037 1.3e-11 74.3 68 52.9
EL10Ac8g20488 Beta vulgaris HOM05D007489 ORTHO05D008037 1.7e-11 73.9 113 40.7
CARHR225330 Cardamine hirsuta HOM05D010718 ORTHO05D008037 2.2e-11 73.6 120 41.7
Prupe.4G057700 Prunus persica HOM05D007489 ORTHO05D008037 2.2e-11 73.6 123 35.8
Aqoxy5G02160 Aquilegia oxysepala HOM05D007489 ORTHO05D008037 2.8e-11 73.2 64 57.8
Oeu041109.2 Olea europaea HOM05D007489 ORTHO05D008037 2.8e-11 73.2 130 34.6
Aa31LG6G1240 Aethionema arabicum HOM05D010718 ORTHO05D008037 3.7e-11 72.8 59 54.2
C07p49740 Brassica napus HOM05D010718 ORTHO05D008037 3.7e-11 72.8 59 55.9
BolC7t45475H Brassica oleracea HOM05D010718 ORTHO05D008037 3.7e-11 72.8 59 55.9
CiPaw.10G057000 Carya illinoinensis HOM05D007489 ORTHO05D008037 3.7e-11 72.8 64 53.1
AUR62036546 Chenopodium quinoa HOM05D007489 ORTHO05D008037 3.7e-11 72.8 91 41.8
AL7G35790 Arabidopsis lyrata HOM05D010718 ORTHO05D008037 4.8e-11 72.4 120 35.0
Carub.0007s2274 Capsella rubella HOM05D010718 ORTHO05D008037 4.8e-11 72.4 57 57.9
ClCG01G023550 Citrullus lanatus HOM05D007489 ORTHO05D008037 4.8e-11 72.4 122 34.4
Nitab4.5_0001928g0060 Nicotiana tabacum HOM05D007489 ORTHO05D008037 4.8e-11 72.4 61 55.7
PGR004G0633 Punica granatum HOM05D007489 ORTHO05D008037 4.8e-11 72.4 62 54.8
TAR627G1016 Trochodendron aralioides HOM05D007489 ORTHO05D008037 4.8e-11 72.4 76 46.1
Medtr4g087875 Medicago truncatula HOM05D007489 ORTHO05D008037 8.2e-11 71.6 71 50.7
TPR.G16271 Trifolium pratense HOM05D007489 ORTHO05D008037 8.2e-11 71.6 71 50.7
CSS0034374 Camellia sinensis var. sinensis HOM05D007489 ORTHO05D008037 1.4e-10 70.9 64 50.0
DCAR_004024 Daucus carota HOM05D007489 ORTHO05D008037 1.8e-10 70.5 69 50.7
AT4G18490 Arabidopsis thaliana HOM05D010718 ORTHO05D008037 2.4e-10 70.1 120 34.2
CAN.G79.55 Capsicum annuum HOM05D007489 ORTHO05D008037 2.4e-10 70.1 65 53.8
Sp7g15530 Schrenkiella parvula HOM05D010718 ORTHO05D008037 2.4e-10 70.1 57 56.1
Phvul.003G057800 Phaseolus vulgaris HOM05D007489 ORTHO05D008037 3.1e-10 69.7 67 52.2
Sed0003654 Sechium edule HOM05D007489 ORTHO05D008037 4.1e-10 69.3 64 48.4
ECA234G3308 Erigeron canadensis HOM05D007489 ORTHO05D008037 6.9e-10 68.6 65 49.2
Lsat_1_v5_gn_4_50401 Lactuca sativa HOM05D007489 ORTHO05D008037 9.1e-10 68.2 107 37.4
PSO063G1126 Papaver somniferum HOM05D007489 ORTHO05D008037 9.1e-10 68.2 120 35.0
Gorai.011G033000 Gossypium raimondii HOM05D007489 ORTHO05D008037 1.2e-09 67.8 63 49.2
Manes.16G035700 Manihot esculenta HOM05D007489 ORTHO05D008037 1.2e-09 67.8 68 47.1
MELO3C007230.2 Cucumis melo HOM05D007489 ORTHO05D008037 1.5e-09 67.4 64 43.8
Gohir.A10G030500 Gossypium hirsutum HOM05D007489 ORTHO05D008037 1.5e-09 67.4 129 31.0
Solyc02g077210.1 Solanum lycopersicum HOM05D007489 ORTHO05D008037 2.0e-09 67.0 64 51.6
Sopen02g022090 Solanum pennellii HOM05D007489 ORTHO05D008037 2.0e-09 67.0 64 51.6
Gohir.D10G031400 Gossypium hirsutum HOM05D007489 ORTHO05D008037 3.4e-09 66.2 125 32.0
Os01g0755100 Oryza sativa ssp. japonica HOM05D007489 ORTHO05D008037 5.9e-09 65.5 64 46.9
Dinv40650 Davidia involucrata HOM05D007489 ORTHO05D008037 1.0e-08 64.7 64 48.4
Ca_26049_v3 Cicer arietinum L. HOM05D007489 ORTHO05D008037 1.3e-08 64.3 66 47.0
HanXRQChr11g0327141 Helianthus annuus HOM05D007489 ORTHO05D008037 1.3e-08 64.3 61 50.8
Glyma.07G204500 Glycine max HOM05D007489 ORTHO05D008037 2.2e-08 63.5 67 52.2
Glyma.13G171550 Glycine max HOM05D007489 ORTHO05D008037 3.8e-08 62.8 56 51.8
Hma1.2p1_0155F.1_g068400 Hydrangea macrophylla HOM05D007489 ORTHO05D008037 3.8e-08 62.8 56 50.0
HPP92_008016 Vanilla planifolia HOM05D007489 ORTHO05D008037 6.5e-08 62.0 66 48.5
HPP92_007965 Vanilla planifolia HOM05D007489 ORTHO05D008037 8.5e-08 61.6 92 38.0


User provided reference genes

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