Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow2G2623 Salvia bowleyana HOM05D000347 ORTHO05D008062 2.8e-109 398.7 204 100.0
Migut.D00520 Erythranthe guttata HOM05D000347 ORTHO05D008062 1.2e-19 100.9 299 35.5
MSTRG.21431 Avicennia marina HOM05D000347 ORTHO05D008062 1.5e-17 94.0 289 33.2
Phvul.008G123300 Phaseolus vulgaris HOM05D000347 ORTHO05D008062 1.2e-16 90.9 289 32.2
Dinv19218 Davidia involucrata HOM05D000347 ORTHO05D008062 4.7e-16 89.0 287 32.1
Eucgr.H00807 Eucalyptus grandis HOM05D000347 ORTHO05D008062 8.0e-16 88.2 286 29.7
Cc01_g17250 Coffea canephora HOM05D000347 ORTHO05D008062 3.0e-15 86.3 296 33.1
SGA_v2.0_scaffold1G00715 Striga asiatica HOM05D000347 ORTHO05D008062 2.6e-14 83.2 281 31.7
Glyma.18G173300 Glycine max HOM05D000347 ORTHO05D008062 5.7e-14 82.0 292 30.8
Glyma.08G356200 Glycine max HOM05D000347 ORTHO05D008062 9.7e-14 81.3 294 32.0
Thecc.01G228300 Theobroma cacao HOM05D000347 ORTHO05D008062 2.4e-12 76.6 278 30.2
Lj1g0023077 Lotus japonicus HOM05D000347 ORTHO05D008062 3.1e-12 76.3 287 32.1
Actinidia23733 Actinidia chinensis HOM05D000347 ORTHO05D008062 5.3e-12 75.5 274 30.7
VMungo1383G0854 Vigna mungo HOM05D000347 ORTHO05D008062 1.6e-11 73.9 284 29.2
CiPaw.04G106800 Carya illinoinensis HOM05D000347 ORTHO05D000694 4.5e-11 72.4 270 30.7
TPR.G15284 Trifolium pratense HOM05D000347 ORTHO05D008062 1.0e-10 71.2 281 33.1
Sopen06g034940 Solanum pennellii HOM05D000347 ORTHO05D008062 1.3e-10 70.9 276 29.0
GSVIVG01028561001 Vitis vinifera HOM05D000347 ORTHO05D008062 1.7e-10 70.5 274 31.0
Nn1g07779 Nelumbo nucifera HOM05D000347 ORTHO05D008062 5.0e-10 68.9 295 28.8
Lalb_Chr01g0022451 Lupinus albus HOM05D000347 ORTHO05D008062 6.5e-10 68.6 255 30.6
Sc05g0002410 Simmondsia chinensis HOM05D000347 ORTHO05D008062 1.5e-09 67.4 278 28.4
Solyc06g083560.3 Solanum lycopersicum HOM05D000347 ORTHO05D008062 2.5e-09 66.6 278 28.4
Lalb_Chr03g0041901 Lupinus albus HOM05D000347 ORTHO05D008062 3.2e-09 66.2 218 32.1
Psat3g142320 Pisum sativum HOM05D000347 ORTHO05D008062 7.2e-09 65.1 284 28.9
PGSC0003DMG400020089 Solanum tuberosum HOM05D007853 ORTHO05D009873 7.2e-09 65.1 271 28.8
TAR365G0021 Trochodendron aralioides HOM05D000347 ORTHO05D008062 9.4e-09 64.7 219 34.7
Solyc09g061715.1 Solanum lycopersicum HOM05D000347 ORTHO05D008062 1.6e-08 63.9 252 28.6
Sopen09g024710 Solanum pennellii HOM05D000347 ORTHO05D008062 1.6e-08 63.9 252 28.6
Gohir.D11G142500 Gossypium hirsutum HOM05D000347 ORTHO05D008062 4.7e-08 62.4 285 26.7
TAR365G1261 Trochodendron aralioides HOM05D000347 ORTHO05D008062 4.7e-08 62.4 216 33.8
Actinidia37581 Actinidia chinensis HOM05D000347 ORTHO05D008062 6.1e-08 62.0 164 36.0
PGR083G0949 Punica granatum HOM05D000347 ORTHO05D008062 6.1e-08 62.0 282 30.5
Manes.12G042000 Manihot esculenta HOM05D000347 ORTHO05D008062 8.0e-08 61.6 286 26.6
Gohir.A11G136100 Gossypium hirsutum HOM05D000347 ORTHO05D008062 1.4e-07 60.8 285 25.6
Cpa.g.sc8.175 Carica papaya HOM05D000347 ORTHO05D008062 1.8e-07 60.5 298 26.5
Gohir.D08G211800 Gossypium hirsutum HOM05D000347 ORTHO05D008062 1.8e-07 60.5 280 26.4
Haze_24776 Corylus avellana HOM05D000347 ORTHO05D008062 4.0e-07 59.3 191 29.8
Gorai.007G152800 Gossypium raimondii HOM05D000347 ORTHO05D008062 4.0e-07 59.3 284 26.4
Gorai.004G225100 Gossypium raimondii HOM05D000347 ORTHO05D008062 5.2e-07 58.9 279 26.2
Potri.002G240300 Populus trichocarpa HOM05D000347 ORTHO05D008062 6.8e-07 58.5 249 30.5
AUR62031831 Chenopodium quinoa HOM05D000347 ORTHO05D008062 8.8e-07 58.2 147 38.8
TWI18G0408 Tripterygium wilfordii HOM05D000347 ORTHO05D008062 1.2e-06 57.8 218 27.1
Medtr0027s0180 Medicago truncatula HOM05D000347 ORTHO05D008062 1.5e-06 57.4 206 34.0
CANSAT01G0926 Cannabis sativa HOM05D000347 ORTHO05D008062 2.0e-06 57.0 212 28.8
Ciclev10021356m.g Citrus clementina HOM05D000347 ORTHO05D008062 3.4e-06 56.2 309 29.1
HanXRQChr01g0014681 Helianthus annuus HOM05D000347 ORTHO05D008062 4.4e-06 55.8 157 32.5
Gohir.A08G194000 Gossypium hirsutum HOM05D000347 ORTHO05D008062 5.7e-06 55.5 280 25.4
Nitab4.5_0002085g0080 Nicotiana tabacum HOM05D000347 ORTHO05D008062 5.7e-06 55.5 151 31.8
SalBow4G1846 Salvia bowleyana HOM05D000347 ORTHO05D008062 5.7e-06 55.5 147 36.7
Hma1.2p1_0351F.1_g132820 Hydrangea macrophylla HOM05D000347 ORTHO05D008062 9.8e-06 54.7 273 27.1


User provided reference genes

Program Settings