Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow2G2610 Salvia bowleyana HOM05D004259 ORTHO05D005014 0.0e+00 1234.2 619 100.0
SalBow2G1152 Salvia bowleyana HOM05D004259 ORTHO05D005014 2.1e-192 676.4 387 89.9
SalBow2G2463 Salvia bowleyana HOM05D004259 ORTHO05D005014 1.0e-191 674.1 387 89.7
SalBow2G2012 Salvia bowleyana HOM05D004259 ORTHO05D005014 5.1e-191 671.8 387 89.4
SalBow3G4106 Salvia bowleyana HOM05D004259 ORTHO05D005014 1.1e-153 547.7 387 76.2
Migut.N02703 Erythranthe guttata HOM05D004259 ORTHO05D005014 2.7e-139 500.0 389 68.1
Oeu018211.1 Olea europaea HOM05D004259 ORTHO05D005014 1.0e-138 498.0 389 68.4
MSTRG.24327 Avicennia marina HOM05D004259 ORTHO05D005014 7.3e-137 491.9 389 68.6
unitig_26.g10027 Utricularia gibba HOM05D004259 ORTHO05D005014 4.7e-128 462.6 387 64.3
Peaxi162Scf00162g00029 Petunia axillaris HOM05D004259 ORTHO05D005014 8.0e-128 461.8 389 62.0
Peaxi162Scf00929g00211 Petunia axillaris HOM05D004259 ORTHO05D005014 1.1e-127 461.5 389 62.5
CSS0003524 Camellia sinensis var. sinensis HOM05D004259 ORTHO05D005014 1.3e-125 454.5 388 62.6
SalBow2G0695 Salvia bowleyana HOM05D004259 ORTHO05D005014 1.3e-125 454.5 285 84.2
Duzib128G0657 Durio zibethinus HOM05D004259 ORTHO05D005014 7.0e-124 448.7 386 61.4
Nitab4.5_0002664g0020 Nicotiana tabacum HOM05D004259 ORTHO05D005014 6.0e-123 445.7 398 59.8
Atru.chr8.1940 Acer truncatum HOM05D004259 ORTHO05D005014 3.0e-122 443.4 389 59.1
Potri.003G094800 Populus trichocarpa HOM05D004259 ORTHO05D005014 3.0e-122 443.4 389 60.9
MBI02_g17334_MAGBIO Magnolia biondii HOM05D004259 ORTHO05D005014 1.9e-121 440.7 395 59.0
CAN.G65.190 Capsicum annuum HOM05D004259 ORTHO05D005014 2.5e-121 440.3 386 60.1
Ciclev10012027m.g Citrus clementina HOM05D004259 ORTHO05D005014 5.6e-121 439.1 389 59.4
PGSC0003DMG400027003 Solanum tuberosum HOM05D004259 ORTHO05D005014 4.7e-120 436.0 387 59.7
Lj3C736T6 Lonicera japonica HOM05D004259 ORTHO05D005014 8.1e-120 435.3 387 60.5
Sopen06g029870 Solanum pennellii HOM05D004259 ORTHO05D005014 1.8e-119 434.1 387 59.4
Lsat_1_v5_gn_1_20280 Lactuca sativa HOM05D004259 ORTHO05D005014 2.3e-119 433.7 387 59.2
HanXRQChr04g0103531 Helianthus annuus HOM05D004259 ORTHO05D005014 3.1e-119 433.3 389 59.1
Solyc06g073510.3 Solanum lycopersicum HOM05D004259 ORTHO05D005014 5.2e-119 432.6 387 58.9
Manes.08G078200 Manihot esculenta HOM05D004259 ORTHO05D005014 6.8e-119 432.2 389 58.4
Nitab4.5_0000111g0020 Nicotiana tabacum HOM05D004259 ORTHO05D005014 6.8e-119 432.2 388 60.6
Gohir.D11G345100 Gossypium hirsutum HOM05D004259 ORTHO05D005014 8.9e-119 431.8 387 59.2
Gorai.007G375500 Gossypium raimondii HOM05D004259 ORTHO05D005014 1.2e-118 431.4 387 59.2
SGA_v2.0_scaffold204G41641 Striga asiatica HOM05D004259 ORTHO05D005014 7.5e-118 428.7 387 61.5
Gohir.A11G326200 Gossypium hirsutum HOM05D004259 ORTHO05D005014 9.9e-118 428.3 387 58.4
Peaxi162Scf00003g02311 Petunia axillaris HOM05D004259 ORTHO05D005014 1.9e-116 424.1 414 56.8
Thecc.05G042500 Theobroma cacao HOM05D004259 ORTHO05D005014 9.2e-116 421.8 386 58.5
Cfa018528 Carpinus fangiana HOM05D004259 ORTHO05D005014 1.6e-115 421.0 385 59.0
EL10Ac3g06655 Beta vulgaris HOM05D004259 ORTHO05D005014 2.1e-115 420.6 388 56.7
CiPaw.15G061500 Carya illinoinensis HOM05D004259 ORTHO05D005014 2.7e-115 420.2 381 59.1
TAR376G0692 Trochodendron aralioides HOM05D004259 ORTHO05D005014 7.8e-115 418.7 382 57.6
Nitab4.5_0002045g0130 Nicotiana tabacum HOM05D004259 ORTHO05D005014 1.0e-114 418.3 386 58.3
Aqoxy7G01016 Aquilegia oxysepala HOM05D004259 ORTHO05D005014 2.3e-114 417.2 378 58.5
Lj5g0003666 Lotus japonicus HOM05D004259 ORTHO05D005014 1.1e-113 414.8 386 56.5
AUR62022427 Chenopodium quinoa HOM05D004259 ORTHO05D005014 2.5e-113 413.7 388 55.9
Sed0023883 Sechium edule HOM05D004259 ORTHO05D005014 2.5e-113 413.7 386 56.7
QL02p005360 Quercus lobata HOM05D004259 ORTHO05D005014 3.3e-113 413.3 438 53.2
PSO675G0522 Papaver somniferum HOM05D004259 ORTHO05D005014 5.6e-113 412.5 388 57.7
AUR62039303 Chenopodium quinoa HOM05D004259 ORTHO05D005014 7.3e-113 412.1 388 54.9
Nn1g05830 Nelumbo nucifera HOM05D004259 ORTHO05D005014 1.2e-112 411.4 388 56.2
Cpa.g.sc973.4 Carica papaya HOM05D004259 ORTHO05D005014 1.6e-112 411.0 389 56.0
MD08G1103300 Malus domestica HOM05D004259 ORTHO05D005014 1.6e-112 411.0 388 57.0
PSO339G6255 Papaver somniferum HOM05D004259 ORTHO05D005014 2.4e-111 407.1 388 57.5
CsaV3_2G028020 Cucumis sativus L. HOM05D004259 ORTHO05D005014 3.1e-111 406.8 385 55.6
THA.LOC104806568 Tarenaya hassleriana HOM05D004259 ORTHO05D005014 4.0e-111 406.4 386 56.5
CANSAT01G2810 Cannabis sativa HOM05D004259 ORTHO05D005014 6.8e-111 405.6 390 55.1
Glyma.14G082100 Glycine max HOM05D004259 ORTHO05D005014 1.2e-110 404.8 384 55.7
Phvul.001G021100 Phaseolus vulgaris HOM05D004259 ORTHO05D005014 1.2e-110 404.8 384 55.2
Lalb_Chr19g0129351 Lupinus albus HOM05D004259 ORTHO05D005014 4.4e-110 402.9 387 55.3
BraA05t19805Z Brassica rapa HOM05D004259 ORTHO05D005014 1.3e-109 401.4 382 56.5
THA.LOC104809222 Tarenaya hassleriana HOM05D004259 ORTHO05D005014 1.3e-109 401.4 385 56.1
ClCG08G015740 Citrullus lanatus HOM05D004259 ORTHO05D005014 2.9e-109 400.2 397 54.4
MELO3C010882.2 Cucumis melo HOM05D004259 ORTHO05D005014 2.9e-109 400.2 385 55.1
A05p08400 Brassica napus HOM05D004259 ORTHO05D005014 3.8e-109 399.8 382 56.3
BcaB02g09273 Brassica carinata HOM05D004259 ORTHO05D005014 4.9e-109 399.4 382 55.8
BcaC02g11869 Brassica carinata HOM05D004259 ORTHO05D005014 4.9e-109 399.4 381 56.4
PSO541G1765 Papaver somniferum HOM05D004259 ORTHO05D005014 8.4e-109 398.7 388 55.7
C04p10400 Brassica napus HOM05D004259 ORTHO05D005014 1.1e-108 398.3 387 55.8
Sabra11G0061200 Salix brachista HOM05D004259 ORTHO05D005014 1.4e-108 397.9 383 56.9
ATR0100G023 Amborella trichopoda HOM05D004259 ORTHO05D005014 1.9e-108 397.5 386 53.9
TPR.G17553 Trifolium pratense HOM05D004259 ORTHO05D005014 2.4e-108 397.1 373 56.3
BolC4t22638H Brassica oleracea HOM05D004259 ORTHO05D005014 3.2e-108 396.7 382 56.3
Sabra03G0064000 Salix brachista HOM05D004259 ORTHO05D005014 3.2e-108 396.7 382 57.3
VMungo0647G0522 Vigna mungo HOM05D004259 ORTHO05D005014 3.2e-108 396.7 382 54.7
PGR031G2227 Punica granatum HOM05D004259 ORTHO05D005014 4.1e-108 396.4 388 56.2
Sp4g19910 Schrenkiella parvula HOM05D004259 ORTHO05D005014 4.1e-108 396.4 382 56.5
CARHR132030 Cardamine hirsuta HOM05D004259 ORTHO05D005014 9.2e-108 395.2 382 55.5
Ca_01811_v3 Cicer arietinum L. HOM05D004259 ORTHO05D005014 2.7e-107 393.7 376 55.6
Ca_29610_v3 Cicer arietinum L. HOM05D004259 ORTHO05D005014 2.7e-107 393.7 376 55.6
Eucgr.F00239 Eucalyptus grandis HOM05D004259 ORTHO05D005014 2.7e-107 393.7 380 55.3
RcHm_v2.0_Chr6g0307691 Rosa chinensis HOM05D004259 ORTHO05D005014 1.0e-106 391.7 389 53.7
FvH4_2g34610 Fragaria vesca HOM05D004259 ORTHO05D005014 1.3e-106 391.3 389 53.2
Carub.0004s1948 Capsella rubella HOM05D004259 ORTHO05D005014 3.0e-106 390.2 382 55.5
FAN20G1942 Fragaria x ananassa HOM05D004259 ORTHO05D005014 3.0e-106 390.2 389 53.2
Thhalv10016846m.g Eutrema salsugineum HOM05D004259 ORTHO05D005014 5.1e-106 389.4 382 55.2
AL4G34050 Arabidopsis lyrata HOM05D004259 ORTHO05D005014 8.7e-106 388.7 382 55.0
Medtr1g019770 Medicago truncatula HOM05D004259 ORTHO05D005014 8.7e-106 388.7 373 55.5
FAN15G2861 Fragaria x ananassa HOM05D001625 ORTHO05D005014 1.1e-105 388.3 387 53.2
Dinv39327 Davidia involucrata HOM05D004259 ORTHO05D005014 1.5e-105 387.9 347 60.5
Haze_17552 Corylus avellana HOM05D004259 ORTHO05D005014 5.6e-105 386.0 390 55.6
Psat6g012600 Pisum sativum HOM05D004259 ORTHO05D005014 5.6e-105 386.0 392 54.3
Nitab4.5_0004918g0050 Nicotiana tabacum HOM05D004259 ORTHO05D005014 4.7e-104 382.9 356 57.0
vmacro04457 Vaccinium macrocarpon HOM05D004259 ORTHO05D005014 6.2e-104 382.5 354 57.6
Cc10_g04310 Coffea canephora HOM05D004259 ORTHO05D005014 1.8e-103 380.9 357 59.1
CDE10G1325 Ceratophyllum demersum HOM05D004259 ORTHO05D005014 5.2e-103 379.4 388 53.4
AT2G37560 Arabidopsis thaliana HOM05D004259 ORTHO05D005014 5.8e-102 375.9 381 52.8
Rhsim10G0028600 Rhododendron simsii HOM05D004259 ORTHO05D005014 2.9e-101 373.6 389 54.2
Sc07g0003460 Simmondsia chinensis HOM05D004259 ORTHO05D005014 4.2e-100 369.8 341 56.3
arahy.Tifrunner.gnm1.ann1.1PWX74 Arachis hypogaea HOM05D004259 ORTHO05D005014 1.6e-99 367.9 384 53.9
arahy.Tifrunner.gnm1.ann1.63NC9C Arachis hypogaea HOM05D004259 ORTHO05D005014 1.6e-99 367.9 384 53.9
Rhsim10G0028100 Rhododendron simsii HOM05D004259 ORTHO05D005014 4.6e-99 366.3 354 55.9
CSS0037728 Camellia sinensis var. sinensis HOM05D004259 ORTHO05D005014 3.9e-98 363.2 387 54.0
Os03g0184700 Oryza sativa ssp. japonica HOM05D004259 ORTHO05D005014 1.9e-97 360.9 379 51.2
TWI53G0519 Tripterygium wilfordii HOM05D004259 ORTHO05D005014 7.3e-97 359.0 388 51.5
ECA247G2793 Erigeron canadensis HOM05D004259 ORTHO05D005014 1.6e-96 357.8 352 55.1
FAN27G2417 Fragaria x ananassa HOM05D004259 ORTHO05D005014 2.4e-92 344.0 389 49.1
Zm00001eb248940 Zea mays HOM05D004259 ORTHO05D005014 2.4e-92 344.0 383 50.1
GSVIVG01009522001 Vitis vinifera HOM05D004259 ORTHO05D005014 5.4e-92 342.8 298 60.4
Hma1.2p1_0718F.1_g208420 Hydrangea macrophylla HOM05D004259 ORTHO05D005014 2.1e-91 340.9 298 62.4
MD15G1084600 Malus domestica HOM05D004259 ORTHO05D005014 2.3e-90 337.4 403 48.9
Rhsim07G0229700 Rhododendron simsii HOM05D004259 ORTHO05D005014 4.8e-88 329.7 359 51.3
Haze_17543 Corylus avellana HOM05D004259 ORTHO05D005014 6.2e-88 329.3 295 60.3
Glyma.17G243200 Glycine max HOM05D004259 ORTHO05D005014 5.8e-86 322.8 317 54.9
Ah.05g168820 Amaranthus hybridus HOM05D001625 ORTHO05D005014 2.2e-85 320.9 302 55.3
Prupe.1G438300 Prunus persica HOM05D004259 ORTHO05D005014 5.1e-82 309.7 298 56.7
Pp3c18_14740 Physcomitrium patens HOM05D004259 ORTHO05D005014 5.5e-76 289.7 373 44.2
SHI12655 Sapria himalayana HOM05D004259 ORTHO05D005014 3.9e-74 283.5 374 47.1
AagrBONN_evm.TU.Sc2ySwM_344.5209 Anthoceros agrestis HOM05D004259 ORTHO05D005014 4.3e-73 280.0 379 42.5
COL.COLO4_14836 Corchorus olitorius HOM05D004259 ORTHO05D005014 6.9e-71 272.7 350 45.4
Actinidia29866 Actinidia chinensis HOM05D004259 ORTHO05D005014 1.5e-70 271.6 394 43.1
SEGI_21568 Sequoiadendron giganteum HOM05D004259 ORTHO05D005014 5.9e-70 269.6 312 46.8
SMO147G0302 Selaginella moellendorffii HOM05D004259 ORTHO05D005014 5.0e-69 266.5 360 42.5
CBR_g6665 Chara braunii HOM05D004259 ORTHO05D005014 1.1e-68 265.4 360 41.4
Mapoly0106s0035 Marchantia polymorpha HOM05D004259 ORTHO05D005014 2.1e-67 261.2 344 44.2
SalBow2G0598 Salvia bowleyana HOM05D004259 ORTHO05D351320 4.2e-60 236.9 135 88.1
RcHm_v2.0_Chr6g0307531 Rosa chinensis HOM05D004259 ORTHO05D005014 2.2e-56 224.6 381 39.9
TWI53G0792 Tripterygium wilfordii HOM05D004259 ORTHO05D005014 2.4e-55 221.1 221 57.9
MCO16G222 Micromonas commoda HOM05D004259 ORTHO05D005014 3.3e-41 174.1 362 31.5
HPP92_027220 Vanilla planifolia HOM05D004259 ORTHO05D005014 7.0e-39 166.4 142 63.4
CDE10G0377 Ceratophyllum demersum HOM05D004259 ORTHO05D005014 5.7e-33 146.7 132 57.6
Cc00_g16720 Coffea canephora HOM05D004259 ORTHO05D005014 1.3e-32 145.6 130 57.7
HPP92_027219 Vanilla planifolia HOM05D004259 ORTHO05D005014 1.3e-29 135.6 131 53.4
AL4G34080 Arabidopsis lyrata HOM05D004259 ORTHO05D005014 1.7e-29 135.2 98 67.3
Gohir.D12G080700 Gossypium hirsutum HOM05D004259 ORTHO05D005014 3.0e-26 124.4 87 71.3
Gorai.011G277900 Gossypium raimondii HOM05D004259 ORTHO05D005014 8.9e-26 122.9 83 73.5
PRCOL_00004897 Prasinoderma coloniale HOM05D004259 ORTHO05D005014 1.5e-25 122.1 388 27.1
Gohir.D02G104501 Gossypium hirsutum HOM05D004259 ORTHO05D005014 2.0e-25 121.7 122 55.7
Gorai.005G118700 Gossypium raimondii HOM05D004259 ORTHO05D005014 1.7e-24 118.6 122 54.1
Actinidia38053 Actinidia chinensis HOM05D004259 ORTHO05D005014 2.0e-22 111.7 91 60.4
Gohir.D03G074850 Gossypium hirsutum HOM05D004259 ORTHO05D005014 2.3e-21 108.2 79 69.6
Nitab4.5_0000017g0120 Nicotiana tabacum HOM05D004259 ORTHO05D005014 6.6e-21 106.7 187 39.6
Gohir.D01G124400 Gossypium hirsutum HOM05D004259 ORTHO05D005014 8.6e-21 106.3 78 69.2
Gohir.D02G123750 Gossypium hirsutum HOM05D004259 ORTHO05D005014 8.6e-21 106.3 78 69.2
Gohir.D04G089650 Gossypium hirsutum HOM05D004259 ORTHO05D005014 1.9e-20 105.1 79 67.1
Gorai.005G130400 Gossypium raimondii HOM05D004259 ORTHO05D005014 2.5e-20 104.8 78 67.9
Gorai.008G056700 Gossypium raimondii HOM05D004259 ORTHO05D005014 2.5e-20 104.8 79 68.4
Gohir.D09G120150 Gossypium hirsutum HOM05D004259 ORTHO05D005014 3.3e-20 104.4 78 67.9
Gorai.004G133100 Gossypium raimondii HOM05D004259 ORTHO05D005014 4.3e-20 104.0 78 66.7
Cc06_g20720 Coffea canephora HOM05D004259 ORTHO05D005014 9.5e-20 102.8 104 57.7
Gorai.006G043100 Gossypium raimondii HOM05D004259 ORTHO05D005014 2.1e-19 101.7 101 58.4
Cre03.g199400 Chlamydomonas reinhardtii HOM05D004259 ORTHO05D005014 3.6e-19 100.9 365 26.3
Gorai.012G099900 Gossypium raimondii HOM05D004259 ORTHO05D005014 1.4e-18 99.0 79 63.3
Gohir.D10G134400 Gossypium hirsutum HOM05D004259 ORTHO05D005014 2.3e-18 98.2 70 68.6
SEGI_22221 Sequoiadendron giganteum HOM05D004259 ORTHO05D005014 3.4e-17 94.4 76 63.2
Aa31sc112G60 Aethionema arabicum HOM05D004259 ORTHO05D005014 3.7e-16 90.9 81 56.8
PSO724G0286 Papaver somniferum HOM05D004259 ORTHO05D005014 1.4e-15 89.0 100 53.0
PSO724G0742 Papaver somniferum HOM05D004259 ORTHO05D005014 3.2e-15 87.8 100 52.0
Sabra15G0136400 Salix brachista HOM05D004259 ORTHO05D004947 2.0e-14 85.1 70 67.1
Cc11_g02680 Coffea canephora HOM05D004259 ORTHO05D005014 4.6e-14 84.0 61 67.2
EL10Ac4g08135 Beta vulgaris HOM05D004259 ORTHO05D005014 6.0e-14 83.6 45 84.4
Gohir.D09G088725 Gossypium hirsutum HOM05D004259 ORTHO05D005014 1.0e-13 82.8 50 82.0
Aa31LG5G22990 Aethionema arabicum HOM05D004259 ORTHO05D005014 4.3e-12 77.4 69 53.6
Cfa024619 Carpinus fangiana HOM05D004259 ORTHO05D005014 5.6e-12 77.0 336 22.3
Cc00_g00370 Coffea canephora HOM05D004259 ORTHO05D005014 1.1e-10 72.8 52 69.2
Gohir.D10G137766 Gossypium hirsutum HOM05D004259 ORTHO05D005014 8.9e-10 69.7 131 35.1
Gohir.D09G037800 Gossypium hirsutum HOM05D004259 ORTHO05D005014 2.0e-09 68.6 43 79.1
Gorai.011G153000 Gossypium raimondii HOM05D004259 ORTHO05D005014 7.5e-09 66.6 45 73.3
Cc01_g09720 Coffea canephora HOM05D004259 ORTHO05D005014 4.9e-08 63.9 43 72.1
Cc02_g31720 Coffea canephora HOM05D004259 ORTHO05D005014 3.2e-07 61.2 42 69.0
Cc10_g11800 Coffea canephora HOM05D006912 ORTHO05D008686 9.2e-07 59.7 43 65.1
Cc09_g06650 Coffea canephora HOM05D004259 ORTHO05D005014 1.6e-06 58.9 42 64.3
Aa31LG5G23020 Aethionema arabicum HOM05D004259 ORTHO05D005014 3.5e-06 57.8 41 70.7


User provided reference genes

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