Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow2G2271 Salvia bowleyana HOM05D006737 ORTHO05D008418 1.1e-203 713.0 348 100.0
MSTRG.12607 Avicennia marina HOM05D006737 ORTHO05D008418 2.8e-109 399.4 265 70.9
SGA_v2.0_scaffold198G41142 Striga asiatica HOM05D006737 ORTHO05D008418 2.6e-99 366.3 257 69.6
Migut.O00484 Erythranthe guttata HOM05D006737 ORTHO05D008418 4.9e-98 362.1 262 67.9
Haze_04944 Corylus avellana HOM05D006737 ORTHO05D008418 5.4e-97 358.6 255 62.0
Migut.N01508 Erythranthe guttata HOM05D006737 ORTHO05D008418 9.2e-97 357.8 262 67.2
Potri.002G203900 Populus trichocarpa HOM05D006737 ORTHO05D008418 2.0e-96 356.7 255 64.7
Cfa005906 Carpinus fangiana HOM05D006737 ORTHO05D008418 1.3e-95 354.0 257 61.5
CiPaw.07G109600 Carya illinoinensis HOM05D006737 ORTHO05D008418 3.9e-95 352.4 256 61.3
Atru.chr5.1140 Acer truncatum HOM05D006737 ORTHO05D008418 6.6e-95 351.7 255 61.6
Migut.J01135 Erythranthe guttata HOM05D006737 ORTHO05D008418 8.6e-95 351.3 278 63.3
Ciclev10021225m.g Citrus clementina HOM05D006737 ORTHO05D008418 2.5e-94 349.7 255 62.7
Peaxi162Scf00140g01213 Petunia axillaris HOM05D006737 ORTHO05D008418 5.6e-94 348.6 261 63.6
vmacro02447 Vaccinium macrocarpon HOM05D006737 ORTHO05D008418 1.2e-93 347.4 257 62.6
FAN27G1696 Fragaria x ananassa HOM05D006737 ORTHO05D008418 3.6e-93 345.9 255 61.6
FvH4_2g25800 Fragaria vesca HOM05D006737 ORTHO05D008418 8.1e-93 344.7 255 61.2
FAN15G3576 Fragaria x ananassa HOM05D006737 ORTHO05D008418 8.1e-93 344.7 255 61.6
FAN24G1027 Fragaria x ananassa HOM05D006737 ORTHO05D008418 8.1e-93 344.7 255 61.2
Manes.01G219800 Manihot esculenta HOM05D006737 ORTHO05D008418 8.1e-93 344.7 255 61.2
TWI14G0449 Tripterygium wilfordii HOM05D006737 ORTHO05D008418 8.1e-93 344.7 254 61.0
Sabra02G0155300 Salix brachista HOM05D006737 ORTHO05D008418 1.8e-92 343.6 284 57.0
CSS0030900 Camellia sinensis var. sinensis HOM05D006737 ORTHO05D008418 2.3e-92 343.2 256 62.5
FAN20G1602 Fragaria x ananassa HOM05D006737 ORTHO05D008418 8.9e-92 341.3 277 57.4
Prupe.8G262100 Prunus persica HOM05D006737 ORTHO05D008418 2.0e-91 340.1 255 60.0
MD03G1288800 Malus domestica HOM05D006737 ORTHO05D008418 2.6e-91 339.7 255 58.8
Cpa.g.sc9.256 Carica papaya HOM05D006737 ORTHO05D008418 3.4e-91 339.3 255 62.0
Nitab4.5_0004367g0110 Nicotiana tabacum HOM05D006737 ORTHO05D008418 4.4e-91 339.0 270 60.4
Oeu048335.1 Olea europaea HOM05D006737 ORTHO05D008418 4.4e-91 339.0 230 68.3
GSVIVG01028025001 Vitis vinifera HOM05D006737 ORTHO05D008418 4.4e-91 339.0 255 61.6
RcHm_v2.0_Chr6g0294111 Rosa chinensis HOM05D006737 ORTHO05D008418 1.3e-90 337.4 255 59.6
CiPaw.07G109800 Carya illinoinensis HOM05D006737 ORTHO05D008418 2.2e-90 336.7 292 53.8
MD11G1309100 Malus domestica HOM05D006737 ORTHO05D008418 2.2e-90 336.7 254 60.2
Actinidia01489 Actinidia chinensis HOM05D006737 ORTHO05D008418 4.9e-90 335.5 237 63.7
Eucgr.H01107 Eucalyptus grandis HOM05D006737 ORTHO05D008418 3.2e-89 332.8 261 57.9
Nn3g21504 Nelumbo nucifera HOM05D006737 ORTHO05D008418 5.4e-89 332.0 261 60.5
Lj6g0001904 Lotus japonicus HOM05D006737 ORTHO05D008418 4.6e-88 328.9 255 56.1
PGR119G0152 Punica granatum HOM05D006737 ORTHO05D008418 7.8e-88 328.2 255 58.0
Sopen06g035940 Solanum pennellii HOM05D006737 ORTHO05D008418 3.0e-87 326.2 258 60.1
VMungo1383G2597 Vigna mungo HOM05D006737 ORTHO05D008418 3.0e-87 326.2 255 59.6
Solyc06g084570.4 Solanum lycopersicum HOM05D006737 ORTHO05D008418 5.1e-87 325.5 262 59.2
Gorai.008G144900 Gossypium raimondii HOM05D006737 ORTHO05D008418 8.6e-87 324.7 255 56.1
CAN.G1209.24 Capsicum annuum HOM05D006737 ORTHO05D008418 1.1e-86 324.3 259 59.1
Hund05430 Selenicereus undatus HOM05D006737 ORTHO05D008418 1.1e-86 324.3 256 57.0
Glyma.19G211400 Glycine max HOM05D006737 ORTHO05D008418 1.9e-86 323.6 255 58.4
Gohir.D12G133900 Gossypium hirsutum HOM05D006737 ORTHO05D008418 1.9e-86 323.6 255 56.1
QL12p028401 Quercus lobata HOM05D006737 ORTHO05D008418 1.9e-86 323.6 254 57.5
Gohir.A12G130100 Gossypium hirsutum HOM05D006737 ORTHO05D008418 9.5e-86 321.2 255 55.7
ECA236G1530 Erigeron canadensis HOM05D006737 ORTHO05D008418 3.6e-85 319.3 257 55.6
Phvul.001G207600 Phaseolus vulgaris HOM05D006737 ORTHO05D008418 4.7e-85 318.9 255 57.3
TAR365G0544 Trochodendron aralioides HOM05D006737 ORTHO05D008418 8.1e-85 318.2 262 58.8
Cc01_g20900 Coffea canephora HOM05D006737 ORTHO05D008418 1.4e-84 317.4 257 56.8
arahy.Tifrunner.gnm1.ann1.AY1VU4 Arachis hypogaea HOM05D006737 ORTHO05D008418 3.1e-84 316.2 256 55.9
EL10Ac7g17513 Beta vulgaris HOM05D006737 ORTHO05D008418 1.2e-83 314.3 255 56.9
Lsat_1_v5_gn_8_164261 Lactuca sativa HOM05D006737 ORTHO05D008418 1.5e-83 313.9 256 54.7
MBI19_g26092_MAGBIO Magnolia biondii HOM05D006737 ORTHO05D008418 1.5e-83 313.9 256 57.4
PSO407G0435 Papaver somniferum HOM05D006737 ORTHO05D008418 2.0e-83 313.5 263 56.7
Rhsim13G0009900 Rhododendron simsii HOM05D006737 ORTHO05D008418 7.6e-83 311.6 265 56.2
PSO170G1161 Papaver somniferum HOM05D006737 ORTHO05D008418 3.7e-82 309.3 263 56.3
AUR62008669 Chenopodium quinoa HOM05D006737 ORTHO05D008418 4.9e-82 308.9 255 56.5
AUR62025575 Chenopodium quinoa HOM05D006737 ORTHO05D008418 4.9e-82 308.9 255 56.9
Thecc.01G301300 Theobroma cacao HOM05D006737 ORTHO05D008418 5.4e-81 305.4 289 50.2
Gohir.D08G085900 Gossypium hirsutum HOM05D006737 ORTHO05D008418 7.1e-81 305.1 252 53.6
Gorai.004G090400 Gossypium raimondii HOM05D006737 ORTHO05D008418 1.2e-80 304.3 252 53.6
DCAR_002840 Daucus carota HOM05D006737 ORTHO05D008418 1.6e-80 303.9 256 55.1
Gohir.A08G076400 Gossypium hirsutum HOM05D006737 ORTHO05D008418 1.6e-80 303.9 252 52.8
Hma1.2p1_0491F.1_g164620 Hydrangea macrophylla HOM05D006737 ORTHO05D008418 6.0e-80 302.0 233 56.2
Sc05g0003760 Simmondsia chinensis HOM05D006737 ORTHO05D008418 6.0e-80 302.0 255 56.5
Aqoxy2G02933 Aquilegia oxysepala HOM05D006737 ORTHO05D008418 1.3e-79 300.8 271 53.9
arahy.Tifrunner.gnm1.ann1.B4PCIP Arachis hypogaea HOM05D006737 ORTHO05D008418 1.7e-79 300.4 264 53.8
ClCG01G014930 Citrullus lanatus HOM05D006737 ORTHO05D008418 8.6e-79 298.1 257 56.0
C03p37890 Brassica napus HOM05D006737 ORTHO05D008418 7.3e-78 295.0 273 50.9
BolC3t16077H Brassica oleracea HOM05D006737 ORTHO05D008418 1.6e-77 293.9 272 50.0
Lalb_Chr02g0146391 Lupinus albus HOM05D006737 ORTHO05D008418 6.2e-77 292.0 234 56.0
CANSAT25G2451 Cannabis sativa HOM05D006737 ORTHO05D008418 1.1e-76 291.2 272 52.2
Aa31LG5G2050 Aethionema arabicum HOM05D006737 ORTHO05D008418 2.4e-76 290.0 260 51.9
AL6G50710 Arabidopsis lyrata HOM05D006737 ORTHO05D008418 3.1e-76 289.7 257 52.5
COL.COLO4_23338 Corchorus olitorius HOM05D006737 ORTHO05D008418 5.2e-76 288.9 210 60.5
Thhalv10028823m.g Eutrema salsugineum HOM05D006737 ORTHO05D008418 1.2e-75 287.7 258 50.8
MELO3C024580.2 Cucumis melo HOM05D006737 ORTHO05D008418 1.5e-75 287.3 257 54.9
CsaV3_6G041030 Cucumis sativus L. HOM05D006737 ORTHO05D008418 2.6e-75 286.6 257 54.5
BcaC01g06761 Brassica carinata HOM05D006737 ORTHO05D008418 3.4e-75 286.2 259 51.4
BcaB01g02446 Brassica carinata HOM05D006737 ORTHO05D008418 5.8e-75 285.4 257 51.0
A03p31080 Brassica napus HOM05D006737 ORTHO05D008418 1.7e-74 283.9 275 50.2
BraA03t12285Z Brassica rapa HOM05D006737 ORTHO05D008418 1.7e-74 283.9 275 50.2
Carub.0006s3475 Capsella rubella HOM05D006737 ORTHO05D008418 6.4e-74 282.0 257 51.4
HanXRQChr04g0114161 Helianthus annuus HOM05D006737 ORTHO05D008418 8.4e-74 281.6 237 52.7
CARHR250600 Cardamine hirsuta HOM05D006737 ORTHO05D008418 1.4e-73 280.8 259 50.2
MBI19_g25361_MAGBIO Magnolia biondii HOM05D006737 ORTHO05D008418 1.4e-73 280.8 296 48.6
Sp6g02290 Schrenkiella parvula HOM05D006737 ORTHO05D008418 2.4e-73 280.0 260 50.0
CDE01G0235 Ceratophyllum demersum HOM05D006737 ORTHO05D008418 2.7e-72 276.6 279 49.8
Lj2A1195G25 Lonicera japonica HOM05D006737 ORTHO05D008418 5.3e-68 262.3 272 51.1
Duzib138G1512 Durio zibethinus HOM05D006737 ORTHO05D008418 2.0e-67 260.4 213 55.4
AT4G02405 Arabidopsis thaliana HOM05D006737 ORTHO05D008418 5.4e-65 252.3 235 48.5
Os07g0247100 Oryza sativa ssp. japonica HOM05D006737 ORTHO05D008418 2.2e-58 230.3 268 45.5
Zm00001eb097030 Zea mays HOM05D006737 ORTHO05D008418 2.7e-56 223.4 265 44.5
Sed0017513 Sechium edule HOM05D006737 ORTHO05D008418 3.2e-49 199.9 173 52.6
Oeu010666.1 Olea europaea HOM05D006737 ORTHO05D008418 1.1e-46 191.4 147 61.2
Nitab4.5_0002820g0110 Nicotiana tabacum HOM05D006737 ORTHO05D008418 2.0e-43 180.6 140 63.6
Pp3c24_12380 Physcomitrium patens HOM05D006737 ORTHO05D008418 4.3e-38 162.9 278 37.4
arahy.Tifrunner.gnm1.ann1.MB1A81 Arachis hypogaea HOM05D006737 ORTHO05D008418 5.5e-33 146.0 124 54.0
Mapoly0132s0018 Marchantia polymorpha HOM05D006737 ORTHO05D008418 3.6e-32 143.3 239 36.8
Dinv33057 Davidia involucrata HOM05D006737 ORTHO05D008418 4.6e-32 142.9 92 63.0
PGSC0003DMG400024036 Solanum tuberosum HOM05D006737 ORTHO05D008418 1.1e-28 131.7 98 57.1
VMungo1383G3174 Vigna mungo HOM05D006737 ORTHO05D008418 1.0e-26 125.2 174 39.7
arahy.Tifrunner.gnm1.ann1.MU6BTE Arachis hypogaea HOM05D006737 ORTHO05D008418 5.5e-25 119.4 116 46.6
Dinv31287 Davidia involucrata HOM05D006737 ORTHO05D008418 1.4e-23 114.8 90 58.9
Dinv07247 Davidia involucrata HOM05D006737 ORTHO05D008418 3.9e-23 113.2 90 57.8
Dinv17961 Davidia involucrata HOM05D006737 ORTHO05D008418 2.0e-22 110.9 86 60.5
SEGI_39136 Sequoiadendron giganteum HOM05D006737 ORTHO05D008418 5.7e-22 109.4 141 37.6
Dinv02523 Davidia involucrata HOM05D006737 ORTHO05D008418 1.3e-13 81.6 85 47.1
Dinv32677 Davidia involucrata HOM05D006737 ORTHO05D008418 1.7e-10 71.2 49 61.2
BcaB01g02447 Brassica carinata HOM05D006737 ORTHO05D008418 2.2e-10 70.9 63 52.4
BcaB01g02050 Brassica carinata HOM05D006737 ORTHO05D008418 2.9e-10 70.5 102 39.2
MCO02G241 Micromonas commoda HOM05D006737 ORTHO05D008418 2.1e-08 64.3 215 26.5
Cre01.g055469 Chlamydomonas reinhardtii HOM05D006737 ORTHO05D008418 2.3e-07 60.8 139 27.3
Atru.chr9.1259 Acer truncatum HOM05D000593 ORTHO05D002268 8.8e-07 58.9 38 73.7
Atru.chr3.1390 Acer truncatum HOM05D000593 ORTHO05D000562 2.0e-06 57.8 38 71.1


User provided reference genes

Program Settings