Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow2G2049 Salvia bowleyana HOM05D003551 ORTHO05D004869 0.0e+00 1417.9 794 100.0
Migut.K00634 Erythranthe guttata HOM05D003551 ORTHO05D004869 7.0e-294 1013.8 787 72.8
MSTRG.7955 Avicennia marina HOM05D003551 ORTHO05D004869 3.5e-277 958.4 811 68.2
Oeu028968.1 Olea europaea HOM05D003551 ORTHO05D004869 3.6e-274 948.3 801 66.7
SGA_v2.0_scaffold92G28200 Striga asiatica HOM05D003551 ORTHO05D004869 4.7e-274 948.0 843 66.4
Nitab4.5_0001290g0150 Nicotiana tabacum HOM05D003551 ORTHO05D004869 2.5e-267 925.6 812 66.9
Hma1.2p1_0079F.1_g041260 Hydrangea macrophylla HOM05D003551 ORTHO05D004869 5.3e-265 917.9 825 64.7
Gorai.008G288600 Gossypium raimondii HOM05D003551 ORTHO05D004869 4.5e-264 914.8 834 62.5
COL.COLO4_23531 Corchorus olitorius HOM05D003551 ORTHO05D004869 9.9e-264 913.7 787 64.4
QL05p021165 Quercus lobata HOM05D003551 ORTHO05D004869 1.3e-263 913.3 813 63.6
CiPaw.06G064600 Carya illinoinensis HOM05D003551 ORTHO05D004869 2.9e-263 912.1 832 61.9
Gohir.A12G268000 Gossypium hirsutum HOM05D003551 ORTHO05D004869 4.9e-263 911.4 831 62.2
Gohir.D12G268400 Gossypium hirsutum HOM05D003551 ORTHO05D004869 2.4e-262 909.1 834 62.1
Nitab4.5_0004725g0020 Nicotiana tabacum HOM05D003551 ORTHO05D004869 2.4e-262 909.1 815 65.4
Dinv14754 Davidia involucrata HOM05D003551 ORTHO05D004869 1.3e-260 903.3 851 64.4
Manes.12G019500 Manihot esculenta HOM05D003551 ORTHO05D004869 1.3e-260 903.3 827 64.6
Prupe.1G240500 Prunus persica HOM05D003551 ORTHO05D004869 2.3e-260 902.5 802 64.0
SalBow5G3625 Salvia bowleyana HOM05D003551 ORTHO05D004869 1.6e-258 896.3 831 62.7
Ciclev10030726m.g Citrus clementina HOM05D003551 ORTHO05D004869 3.6e-258 895.2 825 63.9
Rhsim12G0038300 Rhododendron simsii HOM05D003551 ORTHO05D004869 8.1e-258 894.0 827 64.0
Peaxi162Scf00062g00716 Petunia axillaris HOM05D003551 ORTHO05D004869 1.1e-257 893.6 793 64.2
Oeu014152.4 Olea europaea HOM05D003551 ORTHO05D004869 2.0e-256 889.4 795 64.0
PGSC0003DMG400004723 Solanum tuberosum HOM05D003551 ORTHO05D004869 7.6e-256 887.5 808 65.8
Sabra08G0139300 Salix brachista HOM05D003551 ORTHO05D004869 1.7e-255 886.3 831 62.6
Solyc12g099890.2 Solanum lycopersicum HOM05D003551 ORTHO05D004869 1.7e-255 886.3 811 63.7
Potri.008G182900 Populus trichocarpa HOM05D003551 ORTHO05D004869 4.9e-255 884.8 798 64.9
MD16G1105900 Malus domestica HOM05D003551 ORTHO05D004869 1.4e-254 883.2 813 63.8
Sopen12g034510 Solanum pennellii HOM05D003551 ORTHO05D004869 1.9e-254 882.9 811 64.0
Cpa.g.sc33.80 Carica papaya HOM05D003551 ORTHO05D004869 2.4e-254 882.5 826 62.6
Lalb_Chr23g0277731 Lupinus albus HOM05D003551 ORTHO05D004869 1.0e-252 877.1 797 63.2
Phvul.001G256500 Phaseolus vulgaris HOM05D003551 ORTHO05D004869 1.0e-252 877.1 813 62.7
Eucgr.H02450 Eucalyptus grandis HOM05D003551 ORTHO05D004869 1.3e-252 876.7 844 60.4
ClCG03G002050 Citrullus lanatus HOM05D003551 ORTHO05D004869 1.9e-251 872.8 824 61.9
MELO3C022674.2 Cucumis melo HOM05D003551 ORTHO05D004869 4.8e-250 868.2 828 60.4
Glyma.11G244500 Glycine max HOM05D003551 ORTHO05D004869 4.8e-250 868.2 827 62.4
CsaV3_1G012700 Cucumis sativus L. HOM05D003551 ORTHO05D004869 1.2e-248 863.6 822 61.2
HanXRQChr08g0208471 Helianthus annuus HOM05D003551 ORTHO05D004869 6.5e-247 857.8 822 60.5
CANSAT01G3182 Cannabis sativa HOM05D003551 ORTHO05D004869 2.1e-245 852.8 822 62.0
MELO3C026845.2 Cucumis melo HOM05D003551 ORTHO05D004869 2.7e-245 852.4 822 60.1
GSVIVG01000585001 Vitis vinifera HOM05D003551 ORTHO05D004869 7.9e-245 850.9 780 65.3
ECA240G1955 Erigeron canadensis HOM05D003551 ORTHO05D004869 1.3e-244 850.1 822 60.0
Ca_25128_v3 Cicer arietinum L. HOM05D003551 ORTHO05D004869 3.0e-244 849.0 833 59.2
Cc11_g16150 Coffea canephora HOM05D003551 ORTHO05D004869 1.9e-243 846.3 790 63.2
CAN.G484.3 Capsicum annuum HOM05D003551 ORTHO05D004869 5.7e-243 844.7 785 64.7
Duzib268G0822 Durio zibethinus HOM05D003551 ORTHO05D004869 7.4e-243 844.3 814 61.1
TWI36G0896 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 4.8e-242 841.6 812 62.7
Medtr3g086350 Medicago truncatula HOM05D003551 ORTHO05D004869 1.4e-241 840.1 823 59.2
arahy.Tifrunner.gnm1.ann1.A5BQBU Arachis hypogaea HOM05D003551 ORTHO05D004869 3.4e-240 835.5 812 58.7
VMungo0540G0742 Vigna mungo HOM05D003551 ORTHO05D004869 5.9e-240 834.7 812 60.2
Cfa009260 Carpinus fangiana HOM05D003551 ORTHO05D004869 1.3e-239 833.6 792 63.0
PGR119G0237 Punica granatum HOM05D003551 ORTHO05D004869 1.7e-239 833.2 830 61.3
Lj1g0001310 Lotus japonicus HOM05D003551 ORTHO05D004869 1.4e-238 830.1 819 57.0
Sed0023493 Sechium edule HOM05D003551 ORTHO05D004869 2.5e-238 829.3 818 59.4
CSS0025446 Camellia sinensis var. sinensis HOM05D003551 ORTHO05D004869 1.2e-237 827.0 838 62.1
arahy.Tifrunner.gnm1.ann1.MWLQ6N Arachis hypogaea HOM05D003551 ORTHO05D004869 2.7e-237 825.9 800 58.4
Psat2g160640 Pisum sativum HOM05D003551 ORTHO05D004869 3.6e-237 825.5 814 59.3
Sc04g0005980 Simmondsia chinensis HOM05D003551 ORTHO05D004869 1.3e-234 817.0 802 62.0
PSO478G3924 Papaver somniferum HOM05D003551 ORTHO05D004869 8.2e-234 814.3 825 58.7
PSO017G3678 Papaver somniferum HOM05D003551 ORTHO05D004869 1.1e-233 813.9 808 59.3
TWI34G1512 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 2.4e-233 812.8 785 60.8
Zm00001eb069620 Zea mays HOM05D003551 ORTHO05D004869 2.4e-233 812.8 835 56.3
Aqoxy3G00657 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 2.6e-232 809.3 811 58.9
FAN12G2593 Fragaria x ananassa HOM05D003551 ORTHO05D004869 4.5e-232 808.5 807 58.7
FAN22G1040 Fragaria x ananassa HOM05D003551 ORTHO05D004869 4.5e-232 808.5 810 58.3
Aqoxy3G01365 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 8.5e-231 804.3 811 58.8
RcHm_v2.0_Chr4g0432421 Rosa chinensis HOM05D003551 ORTHO05D004869 1.4e-230 803.5 814 58.0
Lsat_1_v5_gn_8_153780 Lactuca sativa HOM05D003551 ORTHO05D004869 3.2e-230 802.4 812 57.5
Hund25033 Selenicereus undatus HOM05D003551 ORTHO05D004869 5.5e-230 801.6 818 58.1
DCAR_007035 Daucus carota HOM05D003551 ORTHO05D004869 7.2e-230 801.2 837 57.5
Lsat_1_v5_gn_8_153700 Lactuca sativa HOM05D003551 ORTHO05D004869 2.1e-229 799.7 813 58.9
Haze_12293 Corylus avellana HOM05D003551 ORTHO05D004869 2.7e-229 799.3 823 58.2
TWI75G1217 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 4.6e-229 798.5 808 59.4
AUR62014112 Chenopodium quinoa HOM05D003551 ORTHO05D004869 5.1e-228 795.0 806 58.8
Aa31LG1G1640 Aethionema arabicum HOM05D003551 ORTHO05D004869 3.7e-226 788.9 802 58.1
PSO017G4772 Papaver somniferum HOM05D003551 ORTHO05D004869 5.3e-225 785.0 801 57.6
PSO063G2135 Papaver somniferum HOM05D003551 ORTHO05D004869 9.1e-225 784.3 803 58.0
THA.LOC104809236 Tarenaya hassleriana HOM05D003551 ORTHO05D004869 1.1e-222 777.3 825 57.0
TPR.G5678 Trifolium pratense HOM05D003551 ORTHO05D004869 8.8e-220 767.7 807 57.5
LjContig00312_ERROPOS870357g0004032 Lotus japonicus HOM05D003551 ORTHO05D004869 2.2e-218 763.1 821 54.8
EL10Ac6g14297 Beta vulgaris HOM05D003551 ORTHO05D004869 1.1e-217 760.8 819 56.0
SalBow5G3177 Salvia bowleyana HOM05D003551 ORTHO05D004869 2.6e-216 756.1 843 55.8
FvH4_4g25230 Fragaria vesca HOM05D003551 ORTHO05D004869 3.8e-215 752.3 757 58.5
vmacro01109 Vaccinium macrocarpon HOM05D003551 ORTHO05D004869 1.8e-212 743.4 808 57.4
FAN17G0358 Fragaria x ananassa HOM05D003551 ORTHO05D004869 2.3e-212 743.0 882 52.2
HPP92_011125 Vanilla planifolia HOM05D003551 ORTHO05D004869 7.0e-209 731.5 813 54.2
Lj6C816T3 Lonicera japonica HOM05D003551 ORTHO05D004869 1.0e-207 727.6 758 58.2
AL1G24840 Arabidopsis lyrata HOM05D003551 ORTHO05D004869 5.0e-207 725.3 817 55.0
C08p46730 Brassica napus HOM05D003551 ORTHO05D004869 8.3e-202 708.0 807 54.4
AUR62002805 Chenopodium quinoa HOM05D003551 ORTHO05D004869 4.1e-201 705.7 784 54.2
Thecc.02G267000 Theobroma cacao HOM05D003551 ORTHO05D004869 1.2e-200 704.1 709 59.4
A09p63240 Brassica napus HOM05D003551 ORTHO05D004869 2.5e-198 696.4 812 54.8
Thhalv10006828m.g Eutrema salsugineum HOM05D003551 ORTHO05D004869 4.2e-198 695.7 812 54.1
BolC8t52212H Brassica oleracea HOM05D003551 ORTHO05D004869 5.5e-198 695.3 808 54.1
BraA09t41676Z Brassica rapa HOM05D003551 ORTHO05D004869 4.7e-197 692.2 812 54.6
Nn4g22519 Nelumbo nucifera HOM05D003551 ORTHO05D004869 1.7e-194 683.7 658 60.0
AT1G13160 Arabidopsis thaliana HOM05D003551 ORTHO05D004869 2.0e-192 676.8 814 53.3
Carub.0003s0103 Capsella rubella HOM05D003551 ORTHO05D004869 2.5e-190 669.8 805 52.9
Sp1g11680 Schrenkiella parvula HOM05D003551 ORTHO05D004869 9.5e-190 667.9 826 51.7
Carub.0001s1289 Capsella rubella HOM05D003551 ORTHO05D004869 2.1e-189 666.8 809 52.3
Thhalv10005577m.g Eutrema salsugineum HOM05D003551 ORTHO05D004869 4.7e-189 665.6 825 52.8
CARHR068650 Cardamine hirsuta HOM05D003551 ORTHO05D004869 7.8e-184 648.3 800 50.9
AL7G20520 Arabidopsis lyrata HOM05D003551 ORTHO05D004869 2.1e-181 640.2 933 45.3
Aqoxy6G03052 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 6.8e-180 635.2 790 51.1
arahy.Tifrunner.gnm1.ann1.006XS9 Arachis hypogaea HOM05D003551 ORTHO05D004869 1.3e-175 620.9 793 47.3
Pp3c21_560 Physcomitrium patens HOM05D003551 ORTHO05D004869 8.6e-175 618.2 820 49.9
arahy.Tifrunner.gnm1.ann1.5TZZ24 Arachis hypogaea HOM05D003551 ORTHO05D004869 1.1e-174 617.8 790 47.7
arahy.Tifrunner.gnm1.ann1.X9TT4V Arachis hypogaea HOM05D003551 ORTHO05D004869 1.5e-174 617.5 793 47.2
CDE02G2789 Ceratophyllum demersum HOM05D003551 ORTHO05D004869 1.2e-173 614.4 811 48.6
Mapoly0084s0017 Marchantia polymorpha HOM05D003551 ORTHO05D004869 6.2e-173 612.1 800 47.6
unitig_22.g6420 Utricularia gibba HOM05D003551 ORTHO05D004869 1.9e-169 600.5 649 57.2
AT4G31520 Arabidopsis thaliana HOM05D003551 ORTHO05D004869 1.5e-163 580.9 749 49.3
Os04g0630000 Oryza sativa ssp. japonica HOM05D003551 ORTHO05D004869 4.7e-157 559.3 576 60.1
ATR0824G183 Amborella trichopoda HOM05D003551 ORTHO05D004869 3.0e-151 540.0 438 65.3
Pp3c21_561 Physcomitrium patens HOM05D003551 ORTHO05D004869 2.4e-148 530.4 695 51.1
AagrBONN_evm.TU.Sc2ySwM_344.4679 Anthoceros agrestis HOM05D003551 ORTHO05D004869 1.6e-141 507.7 647 48.4
SMO197G0095 Selaginella moellendorffii HOM05D003551 ORTHO05D004869 1.1e-132 478.4 733 43.2
Actinidia01370 Actinidia chinensis HOM05D003551 ORTHO05D004869 3.1e-132 476.9 469 61.8
QL04p087069 Quercus lobata HOM05D003551 ORTHO05D004869 2.3e-127 460.7 543 57.8
AUR62020542 Chenopodium quinoa HOM05D003551 ORTHO05D004869 3.3e-126 456.8 854 40.0
CBR_g23824 Chara braunii HOM05D003551 ORTHO05D004869 1.3e-125 454.9 888 39.4
TAR374G0642 Trochodendron aralioides HOM05D003551 ORTHO05D004869 2.7e-120 437.2 471 59.4
SEGI_37161 Sequoiadendron giganteum HOM05D003551 ORTHO05D004869 1.1e-118 431.8 533 53.1
CARHR013530 Cardamine hirsuta HOM05D003551 ORTHO05D004869 5.3e-116 422.9 522 52.5
Atru.chr11.1973 Acer truncatum HOM05D003551 ORTHO05D004869 5.1e-111 406.4 418 59.3
Atru.chr11.1974 Acer truncatum HOM05D003551 ORTHO05D004869 5.9e-107 392.9 352 61.4
TAR374G0468 Trochodendron aralioides HOM05D003551 ORTHO05D004869 5.7e-102 376.3 306 65.7
PRCOL_00005223 Prasinoderma coloniale HOM05D003551 ORTHO05D004869 2.0e-94 351.3 828 36.4
Medtr4g006000 Medicago truncatula HOM05D003551 ORTHO05D004869 2.0e-91 341.3 524 43.1
SHI17843 Sapria himalayana HOM05D003551 ORTHO05D000023 3.8e-90 337.0 455 45.3
FAN07G2018 Fragaria x ananassa HOM05D003551 ORTHO05D004869 3.2e-89 334.0 276 63.4
Cre06.g277050 Chlamydomonas reinhardtii HOM05D003551 ORTHO05D004869 2.1e-88 331.3 891 33.9
TPR.G18550 Trifolium pratense HOM05D003551 ORTHO05D004869 2.6e-86 324.3 520 39.6
MCO05G293 Micromonas commoda HOM05D003551 ORTHO05D004869 1.3e-85 322.0 782 33.9
AUR62015661 Chenopodium quinoa HOM05D003551 ORTHO05D004869 2.7e-83 314.3 667 39.1
Medtr4g005970 Medicago truncatula HOM05D003551 ORTHO05D004869 7.5e-78 296.2 445 44.0
Sc04g0005970 Simmondsia chinensis HOM05D003551 ORTHO05D004869 1.8e-55 221.9 385 48.3
Cfa023305 Carpinus fangiana HOM05D003551 ORTHO05D004869 5.2e-55 220.3 794 28.2
ATR0824G018 Amborella trichopoda HOM05D003551 ORTHO05D004869 2.0e-54 218.4 356 46.9
Actinidia08115 Actinidia chinensis HOM05D003551 ORTHO05D004869 7.8e-51 206.5 328 47.6
Actinidia01371 Actinidia chinensis HOM05D002413 ORTHO05D002638 7.1e-44 183.3 241 52.7
unitig_22.g6421 Utricularia gibba HOM05D003551 ORTHO05D004869 2.7e-43 181.4 135 68.1
HPP92_027088 Vanilla planifolia HOM05D003551 ORTHO05D004869 3.5e-43 181.0 380 40.3
HPP92_027649 Vanilla planifolia HOM05D003551 ORTHO05D004869 3.8e-37 161.0 334 38.9
HPP92_028576 Vanilla planifolia HOM05D003551 ORTHO05D004869 4.9e-37 160.6 308 40.3
BcaB04g19498 Brassica carinata HOM05D003551 ORTHO05D004869 4.5e-30 137.5 137 56.2
Zm00001eb279220 Zea mays HOM05D003551 ORTHO05D004869 6.0e-27 127.1 136 52.9
Actinidia08116 Actinidia chinensis HOM05D003551 ORTHO05D004869 1.2e-22 112.8 132 52.3
Migut.C01140 Erythranthe guttata HOM05D003551 ORTHO05D004869 2.0e-22 112.1 220 39.5
HPP92_006576 Vanilla planifolia HOM05D003551 ORTHO05D004869 9.9e-22 109.8 204 40.7
arahy.Tifrunner.gnm1.ann1.LJ7GP5 Arachis hypogaea HOM05D003551 ORTHO05D004869 3.8e-21 107.8 102 56.9
BcaB06g26385 Brassica carinata HOM05D003551 ORTHO05D016818 4.2e-20 104.4 94 56.4
HPP92_006539 Vanilla planifolia HOM05D003551 ORTHO05D004869 4.2e-20 104.4 143 44.1
BcaB07g33803 Brassica carinata HOM05D003551 ORTHO05D032399 9.3e-20 103.2 96 57.3
HPP92_026938 Vanilla planifolia HOM05D003551 ORTHO05D004869 9.3e-20 103.2 342 32.7
HPP92_006872 Vanilla planifolia HOM05D003551 ORTHO05D016818 3.3e-17 94.7 84 57.1
HPP92_027653 Vanilla planifolia HOM05D003551 ORTHO05D004869 3.3e-17 94.7 293 31.1
HPP92_006854 Vanilla planifolia HOM05D003551 ORTHO05D016818 7.4e-17 93.6 81 59.3
HPP92_028550 Vanilla planifolia HOM05D003551 ORTHO05D004869 5.3e-15 87.4 166 40.4
Lsat_1_v5_gn_1_12340 Lactuca sativa HOM05D003551 ORTHO05D004869 5.8e-14 84.0 135 45.2
HPP92_027078 Vanilla planifolia HOM05D003551 ORTHO05D004869 7.6e-14 83.6 287 29.6
HPP92_028370 Vanilla planifolia HOM05D003551 ORTHO05D016818 3.8e-13 81.3 72 56.9
HPP92_027994 Vanilla planifolia HOM05D003551 ORTHO05D004869 8.4e-13 80.1 224 35.7
DCAR_030669 Daucus carota HOM05D001959 ORTHO05D006343 2.5e-12 78.6 72 66.7
HPP92_028371 Vanilla planifolia HOM05D003551 ORTHO05D004869 3.2e-12 78.2 204 35.3
HPP92_006855 Vanilla planifolia HOM05D003551 ORTHO05D004869 7.1e-12 77.0 249 29.7
HPP92_027083 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.6e-11 75.9 135 40.7
HPP92_006538 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.1e-11 75.5 76 53.9
ECA234G0329 Erigeron canadensis HOM05D000967 ORTHO05D000796 6.7e-10 70.5 51 60.8
HPP92_006540 Vanilla planifolia HOM05D003551 ORTHO05D016818 1.3e-08 66.2 65 53.8
HPP92_026933 Vanilla planifolia HOM05D015067 ORTHO05D427257 1.6e-08 65.9 41 75.6
DCAR_030665 Daucus carota HOM05D005171 ORTHO05D006343 2.2e-08 65.5 90 53.3
arahy.Tifrunner.gnm1.ann1.C8ML0J Arachis hypogaea HOM05D003551 ORTHO05D004869 2.8e-08 65.1 100 41.0
HPP92_026598 Vanilla planifolia HOM05D003551 ORTHO05D004869 8.2e-08 63.5 80 42.5
Lj6A816T56 Lonicera japonica HOM05D003551 ORTHO05D004869 1.8e-07 62.4 51 60.8
HPP92_006537 Vanilla planifolia HOM05D003551 ORTHO05D431158 2.4e-07 62.0 44 59.1
HPP92_027652 Vanilla planifolia HOM05D003551 ORTHO05D016818 6.9e-07 60.5 57 57.9
Lsat_1_v5_gn_2_63120 Lactuca sativa HOM05D005044 ORTHO05D006799 9.0e-07 60.1 91 47.3
Sed0014055 Sechium edule HOM05D003551 ORTHO05D004869 5.9e-06 57.4 160 36.9
HPP92_028489 Vanilla planifolia HOM05D003551 ORTHO05D016818 1.0e-05 56.6 57 56.1


User provided reference genes

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