Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow2G2012 Salvia bowleyana HOM05D004259 ORTHO05D005014 1.5e-225 785.8 387 100.0
SalBow2G2463 Salvia bowleyana HOM05D004259 ORTHO05D005014 2.7e-222 775.0 387 99.0
SalBow2G1152 Salvia bowleyana HOM05D004259 ORTHO05D005014 1.3e-221 772.7 387 98.4
SalBow2G2610 Salvia bowleyana HOM05D004259 ORTHO05D005014 1.1e-191 673.3 387 89.4
SalBow3G4106 Salvia bowleyana HOM05D004259 ORTHO05D005014 7.1e-183 644.0 387 84.8
Migut.N02703 Erythranthe guttata HOM05D004259 ORTHO05D005014 1.0e-165 587.0 389 75.6
Oeu018211.1 Olea europaea HOM05D004259 ORTHO05D005014 2.3e-165 585.9 389 75.3
MSTRG.24327 Avicennia marina HOM05D004259 ORTHO05D005014 4.5e-161 571.6 389 75.3
SalBow2G0695 Salvia bowleyana HOM05D004259 ORTHO05D005014 5.5e-159 564.7 284 98.2
Peaxi162Scf00162g00029 Petunia axillaris HOM05D004259 ORTHO05D005014 6.5e-152 541.2 389 68.6
CSS0003524 Camellia sinensis var. sinensis HOM05D004259 ORTHO05D005014 2.5e-151 539.3 388 69.8
Peaxi162Scf00929g00211 Petunia axillaris HOM05D004259 ORTHO05D005014 5.5e-151 538.1 389 68.9
unitig_26.g10027 Utricularia gibba HOM05D004259 ORTHO05D005014 1.2e-150 537.0 387 70.0
Duzib128G0657 Durio zibethinus HOM05D004259 ORTHO05D005014 2.7e-150 535.8 386 68.7
MBI02_g17334_MAGBIO Magnolia biondii HOM05D004259 ORTHO05D005014 4.0e-149 531.9 395 66.3
Atru.chr8.1940 Acer truncatum HOM05D004259 ORTHO05D005014 5.7e-148 528.1 389 66.3
Potri.003G094800 Populus trichocarpa HOM05D004259 ORTHO05D005014 9.7e-148 527.3 389 67.9
Ciclev10012027m.g Citrus clementina HOM05D004259 ORTHO05D005014 3.7e-147 525.4 389 66.6
Nitab4.5_0002664g0020 Nicotiana tabacum HOM05D004259 ORTHO05D005014 8.2e-147 524.2 398 66.1
Manes.08G078200 Manihot esculenta HOM05D004259 ORTHO05D005014 3.1e-146 522.3 389 65.6
Lj3C736T6 Lonicera japonica HOM05D004259 ORTHO05D005014 3.5e-145 518.8 387 67.7
SGA_v2.0_scaffold204G41641 Striga asiatica HOM05D004259 ORTHO05D005014 1.0e-144 517.3 387 68.7
CAN.G65.190 Capsicum annuum HOM05D004259 ORTHO05D005014 1.7e-144 516.5 386 66.6
Gohir.D11G345100 Gossypium hirsutum HOM05D004259 ORTHO05D005014 3.8e-144 515.4 387 66.1
Gorai.007G375500 Gossypium raimondii HOM05D004259 ORTHO05D005014 5.0e-144 515.0 387 66.1
PGSC0003DMG400027003 Solanum tuberosum HOM05D004259 ORTHO05D005014 8.5e-144 514.2 387 66.1
Nitab4.5_0000111g0020 Nicotiana tabacum HOM05D004259 ORTHO05D005014 3.2e-143 512.3 388 67.3
Sopen06g029870 Solanum pennellii HOM05D004259 ORTHO05D005014 3.2e-143 512.3 387 65.9
Gohir.A11G326200 Gossypium hirsutum HOM05D004259 ORTHO05D005014 4.2e-143 511.9 387 65.4
Cfa018528 Carpinus fangiana HOM05D004259 ORTHO05D005014 9.4e-143 510.8 385 66.2
Solyc06g073510.3 Solanum lycopersicum HOM05D004259 ORTHO05D005014 9.4e-143 510.8 387 65.4
HanXRQChr04g0103531 Helianthus annuus HOM05D004259 ORTHO05D005014 1.6e-142 510.0 389 65.0
Thecc.05G042500 Theobroma cacao HOM05D004259 ORTHO05D005014 2.7e-142 509.2 386 65.8
Lsat_1_v5_gn_1_20280 Lactuca sativa HOM05D004259 ORTHO05D005014 3.6e-142 508.8 387 65.4
Aqoxy7G01016 Aquilegia oxysepala HOM05D004259 ORTHO05D005014 8.8e-141 504.2 378 65.9
CiPaw.15G061500 Carya illinoinensis HOM05D004259 ORTHO05D005014 2.6e-140 502.7 381 65.1
Sed0023883 Sechium edule HOM05D004259 ORTHO05D005014 3.4e-140 502.3 386 63.7
TAR376G0692 Trochodendron aralioides HOM05D004259 ORTHO05D005014 7.5e-140 501.1 382 64.4
Nitab4.5_0002045g0130 Nicotiana tabacum HOM05D004259 ORTHO05D005014 1.3e-139 500.4 386 65.3
Peaxi162Scf00003g02311 Petunia axillaris HOM05D004259 ORTHO05D005014 6.3e-139 498.0 414 62.8
PSO675G0522 Papaver somniferum HOM05D004259 ORTHO05D005014 1.1e-138 497.3 388 64.4
QL02p005360 Quercus lobata HOM05D004259 ORTHO05D005014 1.4e-138 496.9 438 59.4
CsaV3_2G028020 Cucumis sativus L. HOM05D004259 ORTHO05D005014 3.1e-138 495.7 385 62.9
Nn1g05830 Nelumbo nucifera HOM05D004259 ORTHO05D005014 3.1e-138 495.7 386 63.7
Cpa.g.sc973.4 Carica papaya HOM05D004259 ORTHO05D005014 9.1e-138 494.2 389 63.0
EL10Ac3g06655 Beta vulgaris HOM05D004259 ORTHO05D005014 1.6e-137 493.4 388 63.1
Lj5g0003666 Lotus japonicus HOM05D004259 ORTHO05D005014 5.9e-137 491.5 386 62.4
CANSAT01G2810 Cannabis sativa HOM05D004259 ORTHO05D005014 1.3e-136 490.3 390 62.3
MD08G1103300 Malus domestica HOM05D004259 ORTHO05D005014 1.3e-136 490.3 388 63.4
PSO339G6255 Papaver somniferum HOM05D004259 ORTHO05D005014 2.3e-136 489.6 388 63.9
ClCG08G015740 Citrullus lanatus HOM05D004259 ORTHO05D005014 2.9e-136 489.2 397 61.5
MELO3C010882.2 Cucumis melo HOM05D004259 ORTHO05D005014 2.9e-136 489.2 385 62.3
THA.LOC104806568 Tarenaya hassleriana HOM05D004259 ORTHO05D005014 1.1e-135 487.3 386 62.7
AUR62039303 Chenopodium quinoa HOM05D004259 ORTHO05D005014 1.9e-135 486.5 388 61.6
Phvul.001G021100 Phaseolus vulgaris HOM05D004259 ORTHO05D005014 3.3e-135 485.7 384 61.7
AUR62022427 Chenopodium quinoa HOM05D004259 ORTHO05D005014 7.2e-135 484.6 388 61.6
Glyma.14G082100 Glycine max HOM05D004259 ORTHO05D005014 9.5e-135 484.2 384 62.0
PSO541G1765 Papaver somniferum HOM05D004259 ORTHO05D005014 2.1e-134 483.0 388 62.1
BraA05t19805Z Brassica rapa HOM05D004259 ORTHO05D005014 6.1e-134 481.5 382 62.8
THA.LOC104809222 Tarenaya hassleriana HOM05D004259 ORTHO05D005014 6.1e-134 481.5 385 62.9
Lalb_Chr19g0129351 Lupinus albus HOM05D004259 ORTHO05D005014 1.0e-133 480.7 387 61.5
A05p08400 Brassica napus HOM05D004259 ORTHO05D005014 1.8e-133 479.9 382 62.6
BcaB02g09273 Brassica carinata HOM05D004259 ORTHO05D005014 2.3e-133 479.6 382 62.0
Sabra11G0061200 Salix brachista HOM05D004259 ORTHO05D005014 3.0e-133 479.2 383 63.7
BcaC02g11869 Brassica carinata HOM05D004259 ORTHO05D005014 4.0e-133 478.8 381 62.7
Sabra03G0064000 Salix brachista HOM05D004259 ORTHO05D005014 5.2e-133 478.4 382 64.1
Sp4g19910 Schrenkiella parvula HOM05D004259 ORTHO05D005014 5.2e-133 478.4 382 63.1
Eucgr.F00239 Eucalyptus grandis HOM05D004259 ORTHO05D005014 8.9e-133 477.6 380 61.8
PGR031G2227 Punica granatum HOM05D004259 ORTHO05D005014 8.9e-133 477.6 388 62.6
C04p10400 Brassica napus HOM05D004259 ORTHO05D005014 1.2e-132 477.2 387 62.0
CARHR132030 Cardamine hirsuta HOM05D004259 ORTHO05D005014 1.2e-132 477.2 382 62.0
Haze_17552 Corylus avellana HOM05D004259 ORTHO05D005014 1.2e-132 477.2 390 63.1
BolC4t22638H Brassica oleracea HOM05D004259 ORTHO05D005014 1.5e-132 476.9 382 62.6
TPR.G17553 Trifolium pratense HOM05D004259 ORTHO05D005014 1.5e-132 476.9 373 62.7
RcHm_v2.0_Chr6g0307691 Rosa chinensis HOM05D004259 ORTHO05D005014 2.0e-132 476.5 389 60.7
FvH4_2g34610 Fragaria vesca HOM05D004259 ORTHO05D005014 2.6e-132 476.1 389 60.2
Dinv39327 Davidia involucrata HOM05D004259 ORTHO05D005014 4.4e-132 475.3 347 68.9
FAN20G1942 Fragaria x ananassa HOM05D004259 ORTHO05D005014 5.7e-132 474.9 389 60.2
ATR0100G023 Amborella trichopoda HOM05D004259 ORTHO05D005014 1.3e-131 473.8 386 60.4
VMungo0647G0522 Vigna mungo HOM05D004259 ORTHO05D005014 1.3e-131 473.8 382 60.7
FAN15G2861 Fragaria x ananassa HOM05D001625 ORTHO05D005014 1.7e-131 473.4 387 60.2
Carub.0004s1948 Capsella rubella HOM05D004259 ORTHO05D005014 2.8e-131 472.6 382 62.0
Ca_01811_v3 Cicer arietinum L. HOM05D004259 ORTHO05D005014 3.7e-131 472.2 376 61.7
Ca_29610_v3 Cicer arietinum L. HOM05D004259 ORTHO05D005014 3.7e-131 472.2 376 61.7
AL4G34050 Arabidopsis lyrata HOM05D004259 ORTHO05D005014 4.1e-130 468.8 382 61.3
Thhalv10016846m.g Eutrema salsugineum HOM05D004259 ORTHO05D005014 7.0e-130 468.0 382 61.5
Medtr1g019770 Medicago truncatula HOM05D004259 ORTHO05D005014 5.9e-129 464.9 373 61.1
Psat6g012600 Pisum sativum HOM05D004259 ORTHO05D005014 2.3e-128 463.0 392 60.2
Nitab4.5_0004918g0050 Nicotiana tabacum HOM05D004259 ORTHO05D005014 5.0e-128 461.8 356 64.3
CDE10G1325 Ceratophyllum demersum HOM05D004259 ORTHO05D005014 3.3e-127 459.1 388 60.1
AT2G37560 Arabidopsis thaliana HOM05D004259 ORTHO05D005014 2.8e-126 456.1 381 59.1
Rhsim10G0028600 Rhododendron simsii HOM05D004259 ORTHO05D005014 2.8e-126 456.1 389 61.2
Sc07g0003460 Simmondsia chinensis HOM05D004259 ORTHO05D005014 4.7e-126 455.3 341 64.5
Cc10_g04310 Coffea canephora HOM05D004259 ORTHO05D005014 6.1e-126 454.9 389 60.4
arahy.Tifrunner.gnm1.ann1.1PWX74 Arachis hypogaea HOM05D004259 ORTHO05D005014 5.8e-124 448.4 384 60.4
arahy.Tifrunner.gnm1.ann1.63NC9C Arachis hypogaea HOM05D004259 ORTHO05D005014 5.8e-124 448.4 384 60.4
CSS0037728 Camellia sinensis var. sinensis HOM05D004259 ORTHO05D005014 7.5e-124 448.0 387 61.2
Os03g0184700 Oryza sativa ssp. japonica HOM05D004259 ORTHO05D005014 1.9e-122 443.4 379 57.8
ECA247G2793 Erigeron canadensis HOM05D004259 ORTHO05D005014 2.4e-122 443.0 352 62.8
TWI53G0519 Tripterygium wilfordii HOM05D004259 ORTHO05D005014 2.0e-121 439.9 388 58.0
FAN27G2417 Fragaria x ananassa HOM05D004259 ORTHO05D005014 9.5e-119 431.0 389 56.3
Hma1.2p1_0718F.1_g208420 Hydrangea macrophylla HOM05D004259 ORTHO05D005014 5.2e-117 425.2 298 71.8
GSVIVG01009522001 Vitis vinifera HOM05D004259 ORTHO05D005014 8.9e-117 424.5 298 69.1
Zm00001eb248940 Zea mays HOM05D004259 ORTHO05D005014 1.2e-116 424.1 383 55.9
Haze_17543 Corylus avellana HOM05D004259 ORTHO05D005014 9.8e-116 421.0 295 70.2
MD15G1084600 Malus domestica HOM05D004259 ORTHO05D005014 3.7e-115 419.1 403 55.1
Rhsim07G0229700 Rhododendron simsii HOM05D004259 ORTHO05D005014 2.1e-113 413.3 357 59.1
Glyma.17G243200 Glycine max HOM05D004259 ORTHO05D005014 7.3e-111 404.8 317 62.8
Ah.05g168820 Amaranthus hybridus HOM05D001625 ORTHO05D005014 2.9e-107 392.9 299 62.9
Prupe.1G438300 Prunus persica HOM05D004259 ORTHO05D005014 1.4e-106 390.6 298 65.1
vmacro04457 Vaccinium macrocarpon HOM05D004259 ORTHO05D005014 4.4e-100 369.0 389 52.2
Actinidia29866 Actinidia chinensis HOM05D004259 ORTHO05D005014 7.8e-97 358.2 387 50.4
Rhsim10G0028100 Rhododendron simsii HOM05D004259 ORTHO05D005014 1.1e-95 354.4 389 50.9
Pp3c18_14740 Physcomitrium patens HOM05D004259 ORTHO05D005014 1.2e-94 350.9 373 49.1
AagrBONN_evm.TU.Sc2ySwM_344.5209 Anthoceros agrestis HOM05D004259 ORTHO05D005014 4.0e-93 345.9 379 47.5
SEGI_21568 Sequoiadendron giganteum HOM05D004259 ORTHO05D005014 2.6e-92 343.2 312 53.8
SHI12655 Sapria himalayana HOM05D004259 ORTHO05D005014 5.8e-92 342.0 390 49.5
Mapoly0106s0035 Marchantia polymorpha HOM05D004259 ORTHO05D005014 2.3e-88 330.1 344 49.7
CBR_g6665 Chara braunii HOM05D004259 ORTHO05D005014 3.9e-88 329.3 360 46.1
SMO147G0302 Selaginella moellendorffii HOM05D004259 ORTHO05D005014 6.6e-88 328.6 360 46.9
COL.COLO4_14836 Corchorus olitorius HOM05D004259 ORTHO05D005014 2.4e-85 320.1 385 46.0
RcHm_v2.0_Chr6g0307531 Rosa chinensis HOM05D004259 ORTHO05D005014 2.4e-82 310.1 381 47.0
TWI53G0792 Tripterygium wilfordii HOM05D004259 ORTHO05D005014 5.1e-80 302.4 269 59.9
MCO16G222 Micromonas commoda HOM05D004259 ORTHO05D005014 8.8e-56 221.9 363 35.5
HPP92_027219 Vanilla planifolia HOM05D004259 ORTHO05D005014 4.8e-54 216.1 177 59.3
CDE10G0377 Ceratophyllum demersum HOM05D004259 ORTHO05D005014 4.4e-47 193.0 161 59.6
PRCOL_00004897 Prasinoderma coloniale HOM05D004259 ORTHO05D005014 3.6e-41 173.3 360 31.9
HPP92_027220 Vanilla planifolia HOM05D004259 ORTHO05D005014 1.4e-37 161.4 142 62.0
Nitab4.5_0000017g0120 Nicotiana tabacum HOM05D004259 ORTHO05D005014 1.2e-31 141.7 222 39.2
Cc00_g16720 Coffea canephora HOM05D004259 ORTHO05D005014 3.4e-31 140.2 116 62.1
Gohir.D10G137766 Gossypium hirsutum HOM05D004259 ORTHO05D005014 2.4e-29 134.0 165 43.6
AL4G34080 Arabidopsis lyrata HOM05D004259 ORTHO05D005014 7.0e-29 132.5 98 66.3
Cre03.g199400 Chlamydomonas reinhardtii HOM05D004259 ORTHO05D005014 3.5e-28 130.2 366 28.4
Gohir.D02G104501 Gossypium hirsutum HOM05D004259 ORTHO05D005014 7.2e-26 122.5 139 52.5
Aa31LG5G22990 Aethionema arabicum HOM05D004259 ORTHO05D005014 1.2e-25 121.7 163 41.7
Gohir.D12G080700 Gossypium hirsutum HOM05D004259 ORTHO05D005014 6.1e-25 119.4 87 69.0
Gorai.005G118700 Gossypium raimondii HOM05D004259 ORTHO05D005014 6.1e-25 119.4 139 51.1
Gorai.011G277900 Gossypium raimondii HOM05D004259 ORTHO05D005014 1.0e-24 118.6 83 71.1
Actinidia38053 Actinidia chinensis HOM05D004259 ORTHO05D005014 1.3e-22 111.7 91 60.4
Gohir.D03G074850 Gossypium hirsutum HOM05D004259 ORTHO05D005014 4.5e-20 103.2 79 67.1
Cc06_g20720 Coffea canephora HOM05D004259 ORTHO05D005014 1.7e-19 101.3 104 56.7
Gohir.D01G124400 Gossypium hirsutum HOM05D004259 ORTHO05D005014 2.3e-19 100.9 78 66.7
Gohir.D02G123750 Gossypium hirsutum HOM05D004259 ORTHO05D005014 2.3e-19 100.9 78 66.7
Gohir.D04G089650 Gossypium hirsutum HOM05D004259 ORTHO05D005014 3.8e-19 100.1 79 64.6
Gorai.008G056700 Gossypium raimondii HOM05D004259 ORTHO05D005014 5.0e-19 99.8 79 65.8
Gorai.005G130400 Gossypium raimondii HOM05D004259 ORTHO05D005014 6.6e-19 99.4 78 65.4
Gohir.D09G120150 Gossypium hirsutum HOM05D004259 ORTHO05D005014 8.6e-19 99.0 78 65.4
Gorai.004G133100 Gossypium raimondii HOM05D004259 ORTHO05D005014 1.1e-18 98.6 78 64.1
Gorai.006G043100 Gossypium raimondii HOM05D004259 ORTHO05D005014 4.2e-18 96.7 101 56.4
Gohir.D10G134400 Gossypium hirsutum HOM05D004259 ORTHO05D005014 2.8e-17 94.0 70 65.7
Gorai.012G099900 Gossypium raimondii HOM05D004259 ORTHO05D005014 2.8e-17 94.0 79 60.8
PSO724G0286 Papaver somniferum HOM05D004259 ORTHO05D005014 3.6e-17 93.6 110 50.0
PSO724G0742 Papaver somniferum HOM05D004259 ORTHO05D005014 8.0e-17 92.4 110 49.1
SEGI_22221 Sequoiadendron giganteum HOM05D004259 ORTHO05D005014 3.0e-16 90.5 76 61.8
Aa31sc112G60 Aethionema arabicum HOM05D004259 ORTHO05D005014 3.4e-15 87.0 73 60.3
Cfa024619 Carpinus fangiana HOM05D004259 ORTHO05D005014 7.5e-15 85.9 364 22.0
EL10Ac4g08135 Beta vulgaris HOM05D004259 ORTHO05D005014 3.7e-14 83.6 45 84.4
Cc11_g02680 Coffea canephora HOM05D004259 ORTHO05D005014 2.4e-13 80.9 61 65.6
Sabra15G0136400 Salix brachista HOM05D004259 ORTHO05D004947 9.2e-13 79.0 68 66.2
Gohir.D09G088725 Gossypium hirsutum HOM05D004259 ORTHO05D005014 1.6e-12 78.2 50 78.0
Cc00_g00370 Coffea canephora HOM05D004259 ORTHO05D005014 2.1e-09 67.8 52 65.4
Gohir.D09G037800 Gossypium hirsutum HOM05D004259 ORTHO05D005014 8.0e-09 65.9 43 76.7
Gorai.011G153000 Gossypium raimondii HOM05D004259 ORTHO05D005014 1.5e-07 61.6 45 68.9
Cc01_g09720 Coffea canephora HOM05D004259 ORTHO05D005014 3.4e-07 60.5 43 69.8
Cc02_g31720 Coffea canephora HOM05D004259 ORTHO05D005014 3.4e-07 60.5 42 69.0
Cc10_g11800 Coffea canephora HOM05D006912 ORTHO05D008686 6.4e-06 56.2 43 62.8


User provided reference genes

Program Settings