Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow2G2001 Salvia bowleyana HOM05D008368 ORTHO05D010489 1.9e-44 182.2 98 100.0
Migut.G00302 Erythranthe guttata HOM05D008368 ORTHO05D010489 9.1e-10 67.0 84 54.8
unitig_32.g10803 Utricularia gibba HOM05D008368 ORTHO05D010489 2.7e-09 65.5 69 60.9
Cc03_g03240 Coffea canephora HOM05D008368 ORTHO05D010489 1.3e-08 63.2 42 76.2
Medtr2g022540 Medicago truncatula HOM05D008368 ORTHO05D010489 1.7e-08 62.8 68 54.4
DCAR_002404 Daucus carota HOM05D008368 ORTHO05D010489 2.2e-08 62.4 56 58.9
FvH4_4g14770 Fragaria vesca HOM05D008368 ORTHO05D010489 3.8e-08 61.6 43 69.8
FAN17G1872 Fragaria x ananassa HOM05D008368 ORTHO05D010489 3.8e-08 61.6 43 69.8
Lsat_1_v5_gn_7_68141 Lactuca sativa HOM05D008368 ORTHO05D010489 8.5e-08 60.5 36 83.3
arahy.Tifrunner.gnm1.ann1.121ATL Arachis hypogaea HOM05D008368 ORTHO05D010489 1.1e-07 60.1 61 52.5
arahy.Tifrunner.gnm1.ann1.IPV0IY Arachis hypogaea HOM05D008368 ORTHO05D010489 1.1e-07 60.1 61 52.5
CiPaw.01G161200 Carya illinoinensis HOM05D008368 ORTHO05D010489 1.5e-07 59.7 54 61.1
Ca_00633_v3 Cicer arietinum L. HOM05D008368 ORTHO05D010489 1.5e-07 59.7 38 68.4
FAN07G1534 Fragaria x ananassa HOM05D008368 ORTHO05D010489 1.5e-07 59.7 55 56.4
MELO3C006556.2 Cucumis melo HOM05D008368 ORTHO05D010489 1.9e-07 59.3 44 70.5
FAN22G0200 Fragaria x ananassa HOM05D008368 ORTHO05D010489 1.9e-07 59.3 43 65.1
Actinidia08510 Actinidia chinensis HOM05D008368 ORTHO05D010489 2.5e-07 58.9 57 59.6
Prupe.1G152900 Prunus persica HOM05D008368 ORTHO05D010489 3.2e-07 58.5 41 68.3
Thecc.04G224200 Theobroma cacao HOM05D008368 ORTHO05D010489 3.2e-07 58.5 64 56.2
CSS0036726 Camellia sinensis var. sinensis HOM05D008368 ORTHO05D010489 4.2e-07 58.2 36 72.2
RcHm_v2.0_Chr0c32g0501461 Rosa chinensis HOM05D008368 ORTHO05D010489 4.2e-07 58.2 42 66.7
RcHm_v2.0_Chr0c32g0501651 Rosa chinensis HOM05D008368 ORTHO05D010489 4.2e-07 58.2 42 66.7
EL10Ac3g06405 Beta vulgaris HOM05D008368 ORTHO05D010489 7.2e-07 57.4 39 71.8
EL10Ac3g06406 Beta vulgaris HOM05D008368 ORTHO05D010489 7.2e-07 57.4 39 71.8
CsaV3_3G013620 Cucumis sativus L. HOM05D008368 ORTHO05D010489 7.2e-07 57.4 44 70.5
Sc13g0004110 Simmondsia chinensis HOM05D008368 ORTHO05D010489 7.2e-07 57.4 73 50.7
AUR62038186 Chenopodium quinoa HOM05D008368 ORTHO05D010489 9.4e-07 57.0 66 50.0
Ca_00655_v3 Cicer arietinum L. HOM05D008368 ORTHO05D010489 9.4e-07 57.0 38 65.8
Phvul.006G152200 Phaseolus vulgaris HOM05D008368 ORTHO05D010489 1.2e-06 56.6 59 50.8
Psat1g182840 Pisum sativum HOM05D008368 ORTHO05D010489 1.2e-06 56.6 43 58.1
TPR.G30686 Trifolium pratense HOM05D008368 ORTHO05D010489 1.6e-06 56.2 37 64.9
TPR.G40572 Trifolium pratense HOM05D008368 ORTHO05D010489 1.6e-06 56.2 37 64.9
ClCG05G005370 Citrullus lanatus HOM05D008368 ORTHO05D010489 2.1e-06 55.8 47 63.8
Glyma.13G207400 Glycine max HOM05D008368 ORTHO05D010489 2.1e-06 55.8 59 50.8
Sed0011273 Sechium edule HOM05D008368 ORTHO05D010489 2.1e-06 55.8 43 69.8
MD13G1185300 Malus domestica HOM05D008368 ORTHO05D010489 2.7e-06 55.5 33 75.8
Potri.008G203800 Populus trichocarpa HOM05D008368 ORTHO05D010489 3.6e-06 55.1 34 76.5
AUR62038060 Chenopodium quinoa HOM05D008368 ORTHO05D010489 4.7e-06 54.7 64 48.4
A02p05280 Brassica napus HOM05D008368 ORTHO05D010489 8.0e-06 53.9 48 58.3


User provided reference genes

Program Settings