Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow2G1916 Salvia bowleyana HOM05D006025 ORTHO05D008547 4.2e-165 584.7 317 100.0
MSTRG.7831 Avicennia marina HOM05D006025 ORTHO05D008547 1.6e-95 353.6 274 67.9
Migut.L01348 Erythranthe guttata HOM05D006025 ORTHO05D008547 9.6e-93 344.4 316 62.0
SalBow8G3437 Salvia bowleyana HOM05D006025 ORTHO05D008547 2.4e-91 339.7 295 63.4
Migut.E00118 Erythranthe guttata HOM05D006025 ORTHO05D008547 4.5e-90 335.5 281 63.7
Sopen05g002930 Solanum pennellii HOM05D006025 ORTHO05D008547 2.9e-89 332.8 276 67.8
Nitab4.5_0000679g0100 Nicotiana tabacum HOM05D006025 ORTHO05D008547 3.2e-88 329.3 254 66.1
CAN.G27.7 Capsicum annuum HOM05D006025 ORTHO05D008547 1.2e-87 327.4 253 66.8
Prupe.1G267200 Prunus persica HOM05D006025 ORTHO05D008547 1.2e-87 327.4 252 66.7
PGSC0003DMG400017619 Solanum tuberosum HOM05D006025 ORTHO05D008547 1.3e-86 323.9 316 61.4
Cc11_g13550 Coffea canephora HOM05D006025 ORTHO05D008547 6.7e-86 321.6 277 64.6
FvH4_4g32070 Fragaria vesca HOM05D006025 ORTHO05D008547 1.9e-85 320.1 316 57.9
FAN12G1990 Fragaria x ananassa HOM05D006025 ORTHO05D008547 2.5e-85 319.7 313 58.1
Nitab4.5_0002969g0040 Nicotiana tabacum HOM05D006025 ORTHO05D008547 5.6e-85 318.5 257 68.9
RcHm_v2.0_Chr4g0440761 Rosa chinensis HOM05D006025 ORTHO05D008547 7.4e-85 318.2 289 60.9
Manes.05G096000 Manihot esculenta HOM05D006025 ORTHO05D008547 1.6e-84 317.0 252 63.1
Actinidia31175 Actinidia chinensis HOM05D006025 ORTHO05D008547 2.1e-84 316.6 289 57.1
Lj6A795T74 Lonicera japonica HOM05D006025 ORTHO05D008547 3.6e-84 315.8 284 58.1
FAN07G0827 Fragaria x ananassa HOM05D006025 ORTHO05D008547 4.8e-84 315.5 317 56.8
MD16G1079500 Malus domestica HOM05D006025 ORTHO05D008547 4.8e-84 315.5 257 64.2
COL.COLO4_36182 Corchorus olitorius HOM05D006025 ORTHO05D008547 1.1e-83 314.3 285 59.6
Dinv34195 Davidia involucrata HOM05D006025 ORTHO05D008547 1.1e-83 314.3 281 59.8
FAN22G0508 Fragaria x ananassa HOM05D006025 ORTHO05D008547 1.1e-83 314.3 313 57.5
SGA_v2.0_scaffold87G26972 Striga asiatica HOM05D006025 ORTHO05D008547 4.0e-83 312.4 315 61.0
Peaxi162Scf00209g00517 Petunia axillaris HOM05D006025 ORTHO05D008547 5.3e-83 312.0 271 66.8
Ciclev10032129m.g Citrus clementina HOM05D006025 ORTHO05D008547 2.9e-81 306.2 255 62.4
Oeu044566.1 Olea europaea HOM05D006025 ORTHO05D008547 2.9e-81 306.2 275 62.9
GSVIVG01020079001 Vitis vinifera HOM05D006025 ORTHO05D008547 2.9e-81 306.2 275 60.4
Medtr5g037600 Medicago truncatula HOM05D006025 ORTHO05D008547 8.4e-81 304.7 312 54.8
QL03p065944 Quercus lobata HOM05D006025 ORTHO05D008547 8.4e-81 304.7 315 54.0
CANSAT78G1034 Cannabis sativa HOM05D006025 ORTHO05D008547 1.1e-80 304.3 284 55.3
Rhsim12G0129700 Rhododendron simsii HOM05D006025 ORTHO05D008547 1.1e-80 304.3 316 55.1
Atru.chr11.1861 Acer truncatum HOM05D006025 ORTHO05D008547 1.9e-80 303.5 255 62.7
MD13G1079600 Malus domestica HOM05D006025 ORTHO05D008547 1.9e-80 303.5 282 58.2
vmacro16324 Vaccinium macrocarpon HOM05D006025 ORTHO05D008547 2.4e-80 303.1 323 52.3
PGR119G0173 Punica granatum HOM05D006025 ORTHO05D008547 4.2e-80 302.4 319 56.4
Thecc.02G232800 Theobroma cacao HOM05D006025 ORTHO05D008547 1.2e-79 300.8 239 64.4
Cfa009042 Carpinus fangiana HOM05D006025 ORTHO05D008547 3.5e-79 299.3 268 59.0
Hund25274 Selenicereus undatus HOM05D006025 ORTHO05D008547 4.6e-79 298.9 236 64.4
Lj2g0002167 Lotus japonicus HOM05D006025 ORTHO05D008547 7.9e-79 298.1 252 61.1
TWI18G0579 Tripterygium wilfordii HOM05D006025 ORTHO05D008547 1.3e-78 297.4 268 58.2
Gorai.009G347000 Gossypium raimondii HOM05D006025 ORTHO05D008547 2.3e-78 296.6 259 58.3
CiPaw.05G140400 Carya illinoinensis HOM05D006025 ORTHO05D008547 3.0e-78 296.2 312 53.8
Duzib268G1145 Durio zibethinus HOM05D006025 ORTHO05D008547 3.9e-78 295.8 272 60.7
Gohir.A05G321100 Gossypium hirsutum HOM05D006025 ORTHO05D008547 5.1e-78 295.4 259 58.3
AL5G11850 Arabidopsis lyrata HOM05D006025 ORTHO05D008547 6.7e-78 295.0 323 51.4
Sabra10G0030400 Salix brachista HOM05D006025 ORTHO05D008547 6.7e-78 295.0 244 60.7
TAR481G0011 Trochodendron aralioides HOM05D006025 ORTHO05D008547 6.7e-78 295.0 324 49.7
Lsat_1_v5_gn_3_49700 Lactuca sativa HOM05D006025 ORTHO05D008547 8.7e-78 294.7 331 53.5
Phvul.002G080900 Phaseolus vulgaris HOM05D006025 ORTHO05D008547 4.3e-77 292.4 318 51.9
Potri.010G034400 Populus trichocarpa HOM05D006025 ORTHO05D008547 5.6e-77 292.0 244 60.7
CsaV3_5G032300 Cucumis sativus L. HOM05D006025 ORTHO05D008547 7.4e-77 291.6 248 61.3
Aqoxy3G00786 Aquilegia oxysepala HOM05D006025 ORTHO05D008547 9.6e-77 291.2 235 67.7
MELO3C012062.2 Cucumis melo HOM05D006025 ORTHO05D008547 2.1e-76 290.0 248 60.5
Glyma.01G040500 Glycine max HOM05D006025 ORTHO05D008547 2.1e-76 290.0 320 49.4
HanXRQChr15g0478181 Helianthus annuus HOM05D006025 ORTHO05D008547 2.1e-76 290.0 327 50.5
Psat2g115440 Pisum sativum HOM05D006025 ORTHO05D008547 2.1e-76 290.0 320 55.0
Sc11g0001660 Simmondsia chinensis HOM05D006025 ORTHO05D008547 2.8e-76 289.7 232 64.7
ClCG05G024630 Citrullus lanatus HOM05D006025 ORTHO05D008547 6.2e-76 288.5 252 59.5
Gohir.D05G323300 Gossypium hirsutum HOM05D006025 ORTHO05D008547 6.2e-76 288.5 258 57.0
Sed0022227 Sechium edule HOM05D006025 ORTHO05D008547 6.2e-76 288.5 236 62.3
Eucgr.B02589 Eucalyptus grandis HOM05D006025 ORTHO05D008547 8.1e-76 288.1 215 67.0
VMungo1215G1908 Vigna mungo HOM05D006025 ORTHO05D008547 1.4e-75 287.3 294 53.4
Ca_04692_v3 Cicer arietinum L. HOM05D006025 ORTHO05D008547 6.9e-75 285.0 260 59.6
EL10Ac6g13142 Beta vulgaris HOM05D006025 ORTHO05D008547 9.0e-75 284.6 244 59.4
Cpa.g.sc73.14 Carica papaya HOM05D006025 ORTHO05D008547 9.0e-75 284.6 277 55.2
Haze_12072 Corylus avellana HOM05D006025 ORTHO05D008547 9.0e-75 284.6 225 65.8
CARHR145110 Cardamine hirsuta HOM05D006025 ORTHO05D008547 2.0e-74 283.5 265 60.8
BcaC06g31223 Brassica carinata HOM05D006025 ORTHO05D008547 2.6e-74 283.1 308 53.2
HanXRQChr17g0544581 Helianthus annuus HOM05D006025 ORTHO05D008547 2.6e-74 283.1 255 57.3
AT2G02590 Arabidopsis thaliana HOM05D006025 ORTHO05D008547 3.4e-74 282.7 323 49.8
TPR.G26717 Trifolium pratense HOM05D006025 ORTHO05D008547 4.5e-74 282.3 255 58.4
Lalb_Chr05g0217521 Lupinus albus HOM05D006025 ORTHO05D008547 1.7e-73 280.4 239 58.6
A06p43550 Brassica napus HOM05D006025 ORTHO05D008547 3.8e-73 279.3 257 57.6
Sp2g13810 Schrenkiella parvula HOM05D006025 ORTHO05D008547 6.5e-73 278.5 316 51.6
BraA06t27240Z Brassica rapa HOM05D006025 ORTHO05D008547 8.4e-73 278.1 257 57.6
Carub.0005s0158 Capsella rubella HOM05D006025 ORTHO05D008547 1.1e-72 277.7 322 50.6
Thhalv10004613m.g Eutrema salsugineum HOM05D006025 ORTHO05D008547 3.2e-72 276.2 257 56.8
BcaC06g34048 Brassica carinata HOM05D006025 ORTHO05D008547 7.1e-72 275.0 229 62.0
C07p33300 Brassica napus HOM05D006025 ORTHO05D008547 7.1e-72 275.0 229 62.0
BolC7t43841H Brassica oleracea HOM05D006025 ORTHO05D008547 9.3e-72 274.6 229 62.4
Ah.03g132040 Amaranthus hybridus HOM05D006025 ORTHO05D008547 2.7e-71 273.1 295 52.2
Aa31LG2G7560 Aethionema arabicum HOM05D006025 ORTHO05D008547 3.5e-71 272.7 269 58.0
THA.LOC104805137 Tarenaya hassleriana HOM05D000131 ORTHO05D000086 3.5e-71 272.7 310 51.0
Nn4g23031 Nelumbo nucifera HOM05D006025 ORTHO05D008547 7.9e-71 271.6 222 62.2
DCAR_024490 Daucus carota HOM05D006025 ORTHO05D008547 1.0e-70 271.2 206 67.5
AUR62026262 Chenopodium quinoa HOM05D006025 ORTHO05D008547 1.3e-70 270.8 220 63.2
A09p23920 Brassica napus HOM05D006025 ORTHO05D008547 8.7e-70 268.1 317 50.2
BraA09t37996Z Brassica rapa HOM05D006025 ORTHO05D008547 8.7e-70 268.1 317 50.8
arahy.Tifrunner.gnm1.ann1.1ZL8TB Arachis hypogaea HOM05D006025 ORTHO05D008547 1.9e-69 266.9 235 58.7
arahy.Tifrunner.gnm1.ann1.V5YJYF Arachis hypogaea HOM05D006025 ORTHO05D008547 5.7e-69 265.4 235 58.3
BcaB07g30697 Brassica carinata HOM05D006025 ORTHO05D008547 1.3e-68 264.2 273 54.6
MBI04_g22196_MAGBIO Magnolia biondii HOM05D006025 ORTHO05D008547 1.6e-68 263.8 199 65.3
PSO478G1322 Papaver somniferum HOM05D006025 ORTHO05D008547 1.6e-68 263.8 309 49.5
C09p30780 Brassica napus HOM05D006025 ORTHO05D008547 3.7e-68 262.7 247 55.5
BolC9t55941H Brassica oleracea HOM05D006025 ORTHO05D008547 6.3e-68 261.9 242 56.2
unitig_62.g23684 Utricularia gibba HOM05D006025 ORTHO05D008547 6.3e-68 261.9 288 51.7
BcaC04g21520 Brassica carinata HOM05D006025 ORTHO05D008547 8.2e-68 261.5 280 51.4
ECA246G2177 Erigeron canadensis HOM05D006025 ORTHO05D008547 2.4e-67 260.0 204 64.2
AUR62026454 Chenopodium quinoa HOM05D006025 ORTHO05D008547 3.1e-67 259.6 202 66.3
CSS0050443 Camellia sinensis var. sinensis HOM05D006025 ORTHO05D008547 6.9e-67 258.5 194 65.5
ATR0665G167 Amborella trichopoda HOM05D006025 ORTHO05D008547 1.7e-65 253.8 290 46.2
Os03g0800500 Oryza sativa ssp. japonica HOM05D006025 ORTHO05D008547 2.5e-64 250.0 210 60.0
Zm00001eb212770 Zea mays HOM05D006025 ORTHO05D008547 2.5e-61 240.0 197 65.5
SEGI_16485 Sequoiadendron giganteum HOM05D006025 ORTHO05D008547 3.8e-57 226.1 215 52.1
AagrBONN_evm.TU.Sc2ySwM_117.678 Anthoceros agrestis HOM05D006025 ORTHO05D008547 3.9e-54 216.1 208 52.4
CDE07G0470 Ceratophyllum demersum HOM05D006025 ORTHO05D008547 2.8e-52 209.9 236 51.3
Mapoly0001s0092 Marchantia polymorpha HOM05D006025 ORTHO05D008547 6.3e-52 208.8 200 50.5
SMO147G0037 Selaginella moellendorffii HOM05D006025 ORTHO05D008547 2.9e-49 199.9 201 47.3
CBR_g39595 Chara braunii HOM05D006025 ORTHO05D008547 5.0e-49 199.1 232 45.7
Pp3c22_2360 Physcomitrium patens HOM05D006025 ORTHO05D008547 1.6e-47 194.1 221 47.5
HPP92_018837 Vanilla planifolia HOM05D006025 ORTHO05D008547 2.1e-39 167.2 150 55.3
Glyma.02G024100 Glycine max HOM05D006025 ORTHO05D008547 2.1e-31 140.6 201 44.3
Solyc05g006965.1 Solanum lycopersicum HOM05D006025 ORTHO05D008547 1.3e-25 121.3 178 49.4
CDE06G2488 Ceratophyllum demersum HOM05D006025 ORTHO05D008547 1.2e-21 108.2 172 38.4
SEGI_34054 Sequoiadendron giganteum HOM05D006025 ORTHO05D008547 3.7e-20 103.2 110 46.4
Hma1.2p1_0808F.1_g221580 Hydrangea macrophylla HOM05D006025 ORTHO05D008547 6.6e-17 92.4 65 69.2
Hma1.2p1_0513F.1_g169540 Hydrangea macrophylla HOM05D006025 ORTHO05D008547 1.5e-16 91.3 64 70.3
Zm00001eb151370 Zea mays HOM05D006025 ORTHO05D443914 3.5e-10 70.1 69 56.5


User provided reference genes

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