Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow2G1777 Salvia bowleyana HOM05D003862 ORTHO05D004398 8.4e-45 183.3 94 100.0
DCAR_030095 Daucus carota HOM05D003862 ORTHO05D004398 2.5e-25 118.6 93 64.5
Prupe.6G255300 Prunus persica HOM05D003862 ORTHO05D004398 2.5e-25 118.6 93 62.4
MD12G1141800 Malus domestica HOM05D003862 ORTHO05D004398 5.6e-25 117.5 93 60.2
Cfa017379 Carpinus fangiana HOM05D003862 ORTHO05D004398 7.4e-25 117.1 92 65.2
Haze_20791 Corylus avellana HOM05D003862 ORTHO05D004398 7.4e-25 117.1 92 65.2
CANSAT54G2947 Cannabis sativa HOM05D003862 ORTHO05D004398 1.3e-24 116.3 93 61.3
CSS0028919 Camellia sinensis var. sinensis HOM05D003862 ORTHO05D004398 2.8e-24 115.2 92 64.1
CSS0038231 Camellia sinensis var. sinensis HOM05D003862 ORTHO05D004398 2.8e-24 115.2 92 64.1
MD04G1129100 Malus domestica HOM05D003862 ORTHO05D004398 2.8e-24 115.2 93 59.1
Oeu014415.1 Olea europaea HOM05D003862 ORTHO05D004398 2.8e-24 115.2 92 64.1
Oeu032100.1 Olea europaea HOM05D003862 ORTHO05D004398 2.8e-24 115.2 92 64.1
Lj3g0018643 Lotus japonicus HOM05D003862 ORTHO05D004398 3.7e-24 114.8 93 62.4
Cfa011504 Carpinus fangiana HOM05D003862 ORTHO05D004398 4.8e-24 114.4 93 62.4
CiPaw.09G192600 Carya illinoinensis HOM05D003862 ORTHO05D004398 4.8e-24 114.4 92 63.0
Cc10_g12100 Coffea canephora HOM05D003862 ORTHO05D004398 6.2e-24 114.0 92 63.0
Dinv17003 Davidia involucrata HOM05D003862 ORTHO05D004398 6.2e-24 114.0 92 62.0
Dinv42952 Davidia involucrata HOM05D003862 ORTHO05D004398 6.2e-24 114.0 92 62.0
Dinv43148 Davidia involucrata HOM05D003862 ORTHO05D004398 6.2e-24 114.0 92 62.0
Glyma.12G063000 Glycine max HOM05D003862 ORTHO05D004398 6.2e-24 114.0 93 62.4
HanXRQChr05g0136091 Helianthus annuus HOM05D003862 ORTHO05D004398 6.2e-24 114.0 93 62.4
Phvul.011G064100 Phaseolus vulgaris HOM05D003862 ORTHO05D004398 6.2e-24 114.0 93 61.3
TAR369G0814 Trochodendron aralioides HOM05D003862 ORTHO05D004398 6.2e-24 114.0 88 64.8
Glyma.11G139400 Glycine max HOM05D003862 ORTHO05D004398 8.2e-24 113.6 93 62.4
Lalb_Chr03g0026631 Lupinus albus HOM05D003862 ORTHO05D004398 8.2e-24 113.6 93 61.3
HPP92_018126 Vanilla planifolia HOM05D003862 ORTHO05D004398 8.2e-24 113.6 93 61.3
HPP92_018144 Vanilla planifolia HOM05D003862 ORTHO05D004398 8.2e-24 113.6 93 61.3
SalBow5G2575 Salvia bowleyana HOM05D003862 ORTHO05D004398 1.1e-23 113.2 92 63.0
FvH4_3g36110 Fragaria vesca HOM05D003862 ORTHO05D004398 1.4e-23 112.8 93 61.3
FAN11G3597 Fragaria x ananassa HOM05D003862 ORTHO05D004398 1.4e-23 112.8 93 61.3
FAN16G1598 Fragaria x ananassa HOM05D003862 ORTHO05D004398 1.4e-23 112.8 93 61.3
FAN21G0907 Fragaria x ananassa HOM05D003862 ORTHO05D004398 1.4e-23 112.8 93 61.3
FAN25G1864 Fragaria x ananassa HOM05D003862 ORTHO05D004398 1.4e-23 112.8 93 61.3
CDE07G2069 Ceratophyllum demersum HOM05D003862 ORTHO05D004398 1.8e-23 112.5 93 61.3
Lalb_Chr19g0137831 Lupinus albus HOM05D003862 ORTHO05D004398 1.8e-23 112.5 93 60.2
MD11G1108200 Malus domestica HOM05D003862 ORTHO05D004398 1.8e-23 112.5 93 60.2
RcHm_v2.0_Chr5g0064531 Rosa chinensis HOM05D003862 ORTHO05D004398 1.8e-23 112.5 93 60.2
vmacro20157 Vaccinium macrocarpon HOM05D003862 ORTHO05D004398 2.4e-23 112.1 92 60.9
Migut.D00467 Erythranthe guttata HOM05D003862 ORTHO05D004398 3.1e-23 111.7 92 60.9
Migut.D01636 Erythranthe guttata HOM05D003862 ORTHO05D004398 3.1e-23 111.7 88 64.8
Hma1.2p1_0936F.1_g238710 Hydrangea macrophylla HOM05D003862 ORTHO05D004398 3.1e-23 111.7 88 64.8
Hma1.2p1_1513F.1_g287975 Hydrangea macrophylla HOM05D003862 ORTHO05D004398 3.1e-23 111.7 88 64.8
Medtr4g063925 Medicago truncatula HOM05D003862 ORTHO05D004398 3.1e-23 111.7 93 59.1
Prupe.6G077400 Prunus persica HOM05D003862 ORTHO05D004398 3.1e-23 111.7 93 60.2
TAR636G2804 Trochodendron aralioides HOM05D003862 ORTHO05D004398 3.1e-23 111.7 88 64.8
ClCG10G021140 Citrullus lanatus HOM05D003862 ORTHO05D004398 4.0e-23 111.3 92 59.8
MELO3C009258.2 Cucumis melo HOM05D003862 ORTHO05D004398 4.0e-23 111.3 92 59.8
CsaV3_3G034900 Cucumis sativus L. HOM05D003862 ORTHO05D004398 4.0e-23 111.3 92 59.8
MBI05_g22042_MAGBIO Magnolia biondii HOM05D003862 ORTHO05D004398 4.0e-23 111.3 92 60.9
CiPaw.14G068400 Carya illinoinensis HOM05D003862 ORTHO05D004398 5.3e-23 110.9 93 60.2
Gorai.003G131900 Gossypium raimondii HOM05D003862 ORTHO05D004398 5.3e-23 110.9 93 61.3
Lsat_1_v5_gn_4_177081 Lactuca sativa HOM05D003862 ORTHO05D004398 5.3e-23 110.9 92 60.9
Lsat_1_v5_gn_5_170681 Lactuca sativa HOM05D003862 ORTHO05D004398 5.3e-23 110.9 92 60.9
Hund10643 Selenicereus undatus HOM05D003862 ORTHO05D004398 5.3e-23 110.9 93 59.1
Sc05g0009640 Simmondsia chinensis HOM05D003862 ORTHO05D004398 5.3e-23 110.9 88 62.5
unitig_6.g29269 Utricularia gibba HOM05D003862 ORTHO05D004398 5.3e-23 110.9 88 62.5
unitig_747.g21430 Utricularia gibba HOM05D003862 ORTHO05D004398 5.3e-23 110.9 88 62.5
GSVIVG01024961001 Vitis vinifera HOM05D003862 ORTHO05D004398 5.3e-23 110.9 88 64.8
AUR62038108 Chenopodium quinoa HOM05D003862 ORTHO05D004398 6.9e-23 110.5 93 59.1
Ca_19161_v3 Cicer arietinum L. HOM05D003862 ORTHO05D004398 6.9e-23 110.5 93 58.1
Phvul.L001624 Phaseolus vulgaris HOM05D003862 ORTHO05D004398 6.9e-23 110.5 93 54.8
Sed0018689 Sechium edule HOM05D003862 ORTHO05D004398 6.9e-23 110.5 92 60.9
Nitab4.5_0000349g0310 Nicotiana tabacum HOM05D003862 ORTHO05D004398 9.0e-23 110.2 88 62.5
Nitab4.5_0001911g0090 Nicotiana tabacum HOM05D003862 ORTHO05D004398 9.0e-23 110.2 88 62.5
Peaxi162Scf00330g00415 Petunia axillaris HOM05D003862 ORTHO05D004398 9.0e-23 110.2 88 61.4
PGR004G0102 Punica granatum HOM05D003862 ORTHO05D004398 9.0e-23 110.2 92 63.0
GSVIVG01034172001 Vitis vinifera HOM05D003862 ORTHO05D004398 9.0e-23 110.2 93 61.3
Lj3g0015625 Lotus japonicus HOM05D003862 ORTHO05D004398 1.2e-22 109.8 93 55.9
Gohir.D03G125700 Gossypium hirsutum HOM05D003862 ORTHO05D004398 1.5e-22 109.4 93 60.2
Os12g0571200 Oryza sativa ssp. japonica HOM05D003862 ORTHO05D004398 1.5e-22 109.4 88 62.5
RcHm_v2.0_Chr3g0466561 Rosa chinensis HOM05D003862 ORTHO05D004398 1.5e-22 109.4 94 58.5
unitig_744.g24379 Utricularia gibba HOM05D003862 ORTHO05D004398 1.5e-22 109.4 92 57.6
arahy.Tifrunner.gnm1.ann1.PAA8CG Arachis hypogaea HOM05D003862 ORTHO05D004398 2.0e-22 109.0 93 59.1
PGR119G1270 Punica granatum HOM05D003862 ORTHO05D004398 2.0e-22 109.0 93 59.1
Sed0022625 Sechium edule HOM05D003862 ORTHO05D004398 2.0e-22 109.0 92 59.8
THA.LOC104799442 Tarenaya hassleriana HOM05D003862 ORTHO05D004398 2.0e-22 109.0 93 60.2
TWI36G0288 Tripterygium wilfordii HOM05D003862 ORTHO05D004398 2.0e-22 109.0 93 59.1
Ah.02g115390 Amaranthus hybridus HOM05D003862 ORTHO05D004398 2.6e-22 108.6 93 57.0
AUR62025808 Chenopodium quinoa HOM05D003862 ORTHO05D004398 2.6e-22 108.6 93 58.1
Gohir.D13G233100 Gossypium hirsutum HOM05D003862 ORTHO05D004398 2.6e-22 108.6 93 59.1
Gorai.013G263900 Gossypium raimondii HOM05D003862 ORTHO05D004398 2.6e-22 108.6 93 59.1
PSO063G5647 Papaver somniferum HOM05D003862 ORTHO05D004398 2.6e-22 108.6 88 60.2
PSO339G2698 Papaver somniferum HOM05D003862 ORTHO05D004398 2.6e-22 108.6 88 60.2
PSO384G2795 Papaver somniferum HOM05D003862 ORTHO05D004398 2.6e-22 108.6 88 60.2
PGR102G0842 Punica granatum HOM05D003862 ORTHO05D004398 2.6e-22 108.6 93 58.1
Hund04959 Selenicereus undatus HOM05D003862 ORTHO05D004398 2.6e-22 108.6 83 63.9
THA.LOC104810779 Tarenaya hassleriana HOM05D003862 ORTHO05D004398 2.6e-22 108.6 93 60.2
TWI75G0870 Tripterygium wilfordii HOM05D003862 ORTHO05D004398 2.6e-22 108.6 93 59.1
Ciclev10029679m.g Citrus clementina HOM05D003862 ORTHO05D004398 3.4e-22 108.2 93 59.1
Nitab4.5_0002018g0010 Nicotiana tabacum HOM05D003862 ORTHO05D004398 3.4e-22 108.2 93 58.1
Nitab4.5_0006455g0030 Nicotiana tabacum HOM05D003862 ORTHO05D004398 3.4e-22 108.2 93 58.1
unitig_21.g20465 Utricularia gibba HOM05D003164 ORTHO05D003575 3.4e-22 108.2 92 57.6
Gohir.A13G227500 Gossypium hirsutum HOM05D003862 ORTHO05D004398 4.5e-22 107.8 93 59.1
TWI31G1113 Tripterygium wilfordii HOM05D003862 ORTHO05D004398 4.5e-22 107.8 93 58.1
EL10Ac5g11591 Beta vulgaris HOM05D003862 ORTHO05D004398 5.8e-22 107.5 88 60.2
BcaC02g10413 Brassica carinata HOM05D003862 ORTHO05D004398 5.8e-22 107.5 93 58.1
A03p68180 Brassica napus HOM05D003862 ORTHO05D004398 5.8e-22 107.5 93 58.1
C04p29160 Brassica napus HOM05D003862 ORTHO05D004398 5.8e-22 107.5 93 58.1
BolC4t24450H Brassica oleracea HOM05D003862 ORTHO05D004398 5.8e-22 107.5 93 58.1
BraA01t02647Z Brassica rapa HOM05D003862 ORTHO05D004398 5.8e-22 107.5 93 58.1
CAN.G1195.10 Capsicum annuum HOM05D003862 ORTHO05D004398 5.8e-22 107.5 88 60.2
Gohir.A03G042066 Gossypium hirsutum HOM05D003862 ORTHO05D004398 5.8e-22 107.5 93 59.1
Solyc10g086510.2 Solanum lycopersicum HOM05D003862 ORTHO05D004398 5.8e-22 107.5 88 60.2
Sopen10g035890 Solanum pennellii HOM05D003862 ORTHO05D004398 5.8e-22 107.5 88 60.2
PGSC0003DMG400019201 Solanum tuberosum HOM05D003862 ORTHO05D004398 5.8e-22 107.5 88 60.2
arahy.Tifrunner.gnm1.ann1.Q4VW5J Arachis hypogaea HOM05D003862 ORTHO05D004398 7.6e-22 107.1 93 58.1
Eucgr.A01265 Eucalyptus grandis HOM05D003862 ORTHO05D004398 1.0e-21 106.7 88 59.1
Cpa.g.sc81.150 Carica papaya HOM05D003862 ORTHO05D004398 1.3e-21 106.3 93 59.1
Duzib168G1372 Durio zibethinus HOM05D003862 ORTHO05D004398 1.3e-21 106.3 93 58.1
Duzib170G0179 Durio zibethinus HOM05D003862 ORTHO05D004398 1.3e-21 106.3 93 58.1
Cfa016018 Carpinus fangiana HOM05D000273 ORTHO05D004398 1.7e-21 105.9 93 60.2
Thhalv10002743m.g Eutrema salsugineum HOM05D003862 ORTHO05D004398 1.7e-21 105.9 93 58.1
Glyma.03G082300 Glycine max HOM05D003862 ORTHO05D004398 1.7e-21 105.9 92 53.3
Sp2g01740 Schrenkiella parvula HOM05D003862 ORTHO05D004398 1.7e-21 105.9 93 58.1
Thecc.09G321500 Theobroma cacao HOM05D003862 ORTHO05D004398 1.7e-21 105.9 93 58.1
TPR.G14480 Trifolium pratense HOM05D003862 ORTHO05D004398 1.7e-21 105.9 93 59.1
Duzib150G0578 Durio zibethinus HOM05D003862 ORTHO05D004398 2.2e-21 105.5 93 58.1
ECA248G1530 Erigeron canadensis HOM05D003862 ORTHO05D004398 2.2e-21 105.5 93 55.9
HanXRQChr01g0009491 Helianthus annuus HOM05D003862 ORTHO05D004398 2.2e-21 105.5 92 55.4
AT3G46560 Arabidopsis thaliana HOM05D003862 ORTHO05D004398 3.8e-21 104.8 93 57.0
arahy.Tifrunner.gnm1.ann1.GD7L84 Arachis hypogaea HOM05D003862 ORTHO05D004398 3.8e-21 104.8 92 54.3
CARHR155240 Cardamine hirsuta HOM05D003862 ORTHO05D004398 3.8e-21 104.8 93 58.1
COL.COLO4_18508 Corchorus olitorius HOM05D003862 ORTHO05D004398 3.8e-21 104.8 93 57.0
Thhalv10023780m.g Eutrema salsugineum HOM05D003862 ORTHO05D004398 3.8e-21 104.8 93 57.0
FAN02G2377 Fragaria x ananassa HOM05D003862 ORTHO05D004398 3.8e-21 104.8 93 54.8
FAN09G4075 Fragaria x ananassa HOM05D003862 ORTHO05D004398 3.8e-21 104.8 93 54.8
arahy.Tifrunner.gnm1.ann1.817FQF Arachis hypogaea HOM05D003862 ORTHO05D004398 4.9e-21 104.4 92 54.3
arahy.Tifrunner.gnm1.ann1.JG2TRE Arachis hypogaea HOM05D003862 ORTHO05D004398 4.9e-21 104.4 92 54.3
arahy.Tifrunner.gnm1.ann1.L1N949 Arachis hypogaea HOM05D003862 ORTHO05D004398 4.9e-21 104.4 92 54.3
TPR.G17728 Trifolium pratense HOM05D003862 ORTHO05D004398 4.9e-21 104.4 93 59.1
Actinidia05313 Actinidia chinensis HOM05D003862 ORTHO05D004398 6.5e-21 104.0 88 60.2
Aa31sc23G440 Aethionema arabicum HOM05D003862 ORTHO05D004398 6.5e-21 104.0 93 57.0
AL5G25420 Arabidopsis lyrata HOM05D003862 ORTHO05D004398 6.5e-21 104.0 93 57.0
FvH4_6g13690 Fragaria vesca HOM05D003862 ORTHO05D004398 6.5e-21 104.0 93 54.8
Carub.0003s2691 Capsella rubella HOM05D003862 ORTHO05D004398 8.4e-21 103.6 93 57.0
Carub.0005s1283 Capsella rubella HOM05D003862 ORTHO05D004398 1.1e-20 103.2 93 55.9
Manes.02G133100 Manihot esculenta HOM05D003862 ORTHO05D004398 1.1e-20 103.2 87 58.6
Aa31LG4G15560 Aethionema arabicum HOM05D003862 ORTHO05D004398 1.4e-20 102.8 93 55.9
Peaxi162Scf01517g00013 Petunia axillaris HOM05D003862 ORTHO05D004398 1.4e-20 102.8 87 56.3
Potri.012G039100 Populus trichocarpa HOM05D003862 ORTHO05D004398 1.4e-20 102.8 92 55.4
Sabra12G0027600 Salix brachista HOM05D003862 ORTHO05D004398 1.4e-20 102.8 92 55.4
TPR.G5603 Trifolium pratense HOM05D003862 ORTHO05D004398 1.9e-20 102.4 88 53.4
BcaC04g22454 Brassica carinata HOM05D003862 ORTHO05D004398 2.5e-20 102.1 93 54.8
A09p15900 Brassica napus HOM05D003862 ORTHO05D004398 2.5e-20 102.1 93 54.8
C09p19140 Brassica napus HOM05D003862 ORTHO05D004398 2.5e-20 102.1 93 54.8
BolC9t54821H Brassica oleracea HOM05D003862 ORTHO05D004398 2.5e-20 102.1 93 54.8
BraA09t37226Z Brassica rapa HOM05D003862 ORTHO05D004398 2.5e-20 102.1 93 54.8
Manes.01G173900 Manihot esculenta HOM05D003862 ORTHO05D004398 3.2e-20 101.7 87 57.5
BcaB07g31364 Brassica carinata HOM05D003862 ORTHO05D004398 5.5e-20 100.9 93 54.8
Pp3c24_15930 Physcomitrium patens HOM05D003862 ORTHO05D004398 1.2e-19 99.8 84 57.1
Aqoxy4G02928 Aquilegia oxysepala HOM05D003862 ORTHO05D004398 1.6e-19 99.4 88 54.5
Mapoly0020s0168 Marchantia polymorpha HOM05D003862 ORTHO05D004398 2.7e-19 98.6 80 57.5
AagrBONN_evm.TU.Sc2ySwM_368.1516 Anthoceros agrestis HOM05D003862 ORTHO05D004398 3.5e-19 98.2 84 53.6
Rhsim05G0192800 Rhododendron simsii HOM05D003862 ORTHO05D004398 3.5e-19 98.2 115 48.7
MD03G1093400 Malus domestica HOM05D003862 ORTHO05D004398 4.6e-19 97.8 82 59.8
VMungo1127G0240 Vigna mungo HOM05D003862 ORTHO05D004398 4.6e-19 97.8 82 61.0
Psat7g239120 Pisum sativum HOM05D003862 ORTHO05D004398 1.0e-18 96.7 92 47.8
ATR0559G041 Amborella trichopoda HOM05D003862 ORTHO05D004398 1.3e-18 96.3 82 56.1
SMO367G0781 Selaginella moellendorffii HOM05D003862 ORTHO05D004398 1.3e-18 96.3 81 55.6
Pp3c20_6200 Physcomitrium patens HOM05D003862 ORTHO05D004398 8.7e-18 93.6 80 56.2
Os05g0111100 Oryza sativa ssp. japonica HOM05D003862 ORTHO05D004398 1.5e-17 92.8 76 56.6
Actinidia11257 Actinidia chinensis HOM05D003862 ORTHO05D004398 7.4e-17 90.5 73 61.6
QL07p048307 Quercus lobata HOM05D003862 ORTHO05D004398 1.6e-16 89.4 153 39.9
CBR_g46834 Chara braunii HOM05D003862 ORTHO05D004398 2.8e-16 88.6 78 52.6
MCO12G250 Micromonas commoda HOM05D003862 ORTHO05D004398 4.8e-16 87.8 86 46.5
FAN27G3302 Fragaria x ananassa HOM05D003862 ORTHO05D004398 1.4e-15 86.3 93 48.4
PRCOL_00005138 Prasinoderma coloniale HOM05D003862 ORTHO05D004398 1.8e-15 85.9 87 47.1
Haze_24096 Corylus avellana HOM05D003862 ORTHO05D004398 2.4e-15 85.5 61 65.6
Nn2g14532 Nelumbo nucifera HOM05D003862 ORTHO05D004398 2.4e-15 85.5 67 61.2
QL01p031927 Quercus lobata HOM05D003862 ORTHO05D004398 5.3e-15 84.3 61 63.9
Sc20g0004910 Simmondsia chinensis HOM05D003862 ORTHO05D004398 9.0e-15 83.6 60 65.0
vmacro08654 Vaccinium macrocarpon HOM05D003862 ORTHO05D004398 1.5e-14 82.8 148 35.8
Dinv37171 Davidia involucrata HOM05D003862 ORTHO05D004398 4.5e-14 81.3 59 64.4
CAN.G326.7 Capsicum annuum HOM05D003862 ORTHO05D004398 7.7e-14 80.5 61 60.7
Peaxi162Scf00165g00129 Petunia axillaris HOM05D003862 ORTHO05D004398 1.7e-13 79.3 87 50.6
Cre01.g033400 Chlamydomonas reinhardtii HOM05D003862 ORTHO05D004398 1.9e-12 75.9 82 43.9
FAN14G4115 Fragaria x ananassa HOM05D003862 ORTHO05D004398 3.2e-12 75.1 93 46.2
Solyc08g048070.1 Solanum lycopersicum HOM05D003862 ORTHO05D004398 1.2e-11 73.2 67 53.7
MBI14_g20103_MAGBIO Magnolia biondii HOM05D003862 ORTHO05D004398 2.1e-11 72.4 88 51.1
Medtr4g021715 Medicago truncatula HOM05D003862 ORTHO05D004398 4.3e-09 64.7 92 37.0


User provided reference genes

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