Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow2G1702 Salvia bowleyana HOM05D007103 ORTHO05D008948 7.2e-156 553.9 288 100.0
MSTRG.2093 Avicennia marina HOM05D007103 ORTHO05D008948 6.4e-120 434.5 267 83.5
SGA_v2.0_scaffold127G33990 Striga asiatica HOM05D007103 ORTHO05D008948 1.1e-114 417.2 267 82.8
Migut.E00576 Erythranthe guttata HOM05D007103 ORTHO05D008948 1.1e-108 397.1 295 73.6
unitig_8.g4025 Utricularia gibba HOM05D007103 ORTHO05D008948 1.9e-108 396.4 265 78.5
Dinv06214 Davidia involucrata HOM05D007103 ORTHO05D008948 3.2e-95 352.4 277 70.0
Solyc04g008560.3 Solanum lycopersicum HOM05D007103 ORTHO05D008948 9.3e-95 350.9 277 67.9
Sopen04g003720 Solanum pennellii HOM05D007103 ORTHO05D008948 9.3e-95 350.9 277 67.9
PGSC0003DMG400031375 Solanum tuberosum HOM05D007103 ORTHO05D008948 9.3e-95 350.9 277 67.9
Nn3g18722 Nelumbo nucifera HOM05D007103 ORTHO05D008948 1.0e-93 347.4 277 67.9
Peaxi162Scf00329g00938 Petunia axillaris HOM05D007103 ORTHO05D008948 2.3e-93 346.3 275 68.4
Nitab4.5_0007973g0020 Nicotiana tabacum HOM05D007103 ORTHO05D008948 8.7e-93 344.4 287 66.9
GSVIVG01010248001 Vitis vinifera HOM05D007103 ORTHO05D008948 1.1e-92 344.0 280 67.1
CSS0049146 Camellia sinensis var. sinensis HOM05D007103 ORTHO05D008948 1.5e-92 343.6 277 69.3
Nitab4.5_0000129g0430 Nicotiana tabacum HOM05D007103 ORTHO05D008948 7.4e-92 341.3 277 67.1
Lj3A854G74 Lonicera japonica HOM05D007103 ORTHO05D008948 1.3e-91 340.5 274 70.1
Manes.10G065901 Manihot esculenta HOM05D007103 ORTHO05D008948 1.8e-90 336.7 277 65.3
MBI06_g12320_MAGBIO Magnolia biondii HOM05D007103 ORTHO05D008948 2.4e-90 336.3 277 66.1
Cfa015108 Carpinus fangiana HOM05D007103 ORTHO05D008948 3.1e-90 335.9 277 65.7
Sed0022925 Sechium edule HOM05D007103 ORTHO05D008948 5.3e-90 335.1 276 65.2
Haze_01571 Corylus avellana HOM05D007103 ORTHO05D008948 1.2e-89 334.0 277 66.1
TAR371G1171 Trochodendron aralioides HOM05D007103 ORTHO05D008948 1.0e-88 330.9 277 65.0
CANSAT78G0644 Cannabis sativa HOM05D007103 ORTHO05D008948 3.8e-88 328.9 280 64.6
Actinidia32355 Actinidia chinensis HOM05D007103 ORTHO05D008948 1.4e-87 327.0 267 68.9
CiPaw.05G161900 Carya illinoinensis HOM05D007103 ORTHO05D008948 5.5e-87 325.1 277 63.9
CsaV3_5G017430 Cucumis sativus L. HOM05D007103 ORTHO05D008948 1.6e-86 323.6 275 61.1
TWI74G0969 Tripterygium wilfordii HOM05D007103 ORTHO05D008948 2.1e-86 323.2 280 63.6
vmacro08589 Vaccinium macrocarpon HOM05D007103 ORTHO05D008948 2.7e-86 322.8 281 64.1
Lsat_1_v5_gn_3_27560 Lactuca sativa HOM05D007103 ORTHO05D008948 4.6e-86 322.0 277 66.1
MELO3C005211.2 Cucumis melo HOM05D007103 ORTHO05D008948 6.0e-86 321.6 276 61.6
QL03p041867 Quercus lobata HOM05D007103 ORTHO05D008948 6.0e-86 321.6 277 65.0
Eucgr.B02623 Eucalyptus grandis HOM05D007103 ORTHO05D008948 1.0e-85 320.9 271 65.3
HanXRQChr14g0446891 Helianthus annuus HOM05D007103 ORTHO05D008948 2.3e-85 319.7 276 65.2
ClCG01G007020 Citrullus lanatus HOM05D007103 ORTHO05D008948 3.0e-85 319.3 280 61.1
Prupe.1G342500 Prunus persica HOM05D007103 ORTHO05D008948 5.7e-84 315.1 285 61.4
CAN.G458.2 Capsicum annuum HOM05D007103 ORTHO05D008948 2.1e-83 313.2 218 73.4
Potri.008G143700 Populus trichocarpa HOM05D007103 ORTHO05D008948 3.7e-83 312.4 273 64.1
Rhsim04G0168800 Rhododendron simsii HOM05D007103 ORTHO05D008948 1.4e-82 310.5 290 62.4
DCAR_030327 Daucus carota HOM05D007103 ORTHO05D008948 2.0e-81 306.6 277 62.5
Sabra08G0108900 Salix brachista HOM05D007103 ORTHO05D008948 2.0e-81 306.6 273 63.0
Thecc.02G296200 Theobroma cacao HOM05D007103 ORTHO05D008948 1.7e-80 303.5 275 59.6
COL.COLO4_27515 Corchorus olitorius HOM05D007103 ORTHO05D008948 2.2e-80 303.1 280 60.0
RcHm_v2.0_Chr4g0446051 Rosa chinensis HOM05D007103 ORTHO05D008948 2.2e-80 303.1 284 60.9
Glyma.05G135400 Glycine max HOM05D007103 ORTHO05D008948 3.8e-80 302.4 268 62.3
THA.LOC104805941 Tarenaya hassleriana HOM05D007103 ORTHO05D008948 3.8e-80 302.4 297 55.6
arahy.Tifrunner.gnm1.ann1.U7H2Z0 Arachis hypogaea HOM05D007103 ORTHO05D008948 6.5e-80 301.6 276 60.9
PGR044G1063 Punica granatum HOM05D007103 ORTHO05D008948 1.1e-79 300.8 267 61.4
arahy.Tifrunner.gnm1.ann1.CDY64E Arachis hypogaea HOM05D007103 ORTHO05D008948 1.4e-79 300.4 271 62.0
Ciclev10005118m.g Citrus clementina HOM05D007103 ORTHO05D008948 5.5e-79 298.5 212 70.8
Ciclev10010767m.g Citrus clementina HOM05D007103 ORTHO05D008948 5.5e-79 298.5 212 70.8
Phvul.002G186800 Phaseolus vulgaris HOM05D007103 ORTHO05D008948 1.6e-78 297.0 270 61.5
CDE08G0078 Ceratophyllum demersum HOM05D007103 ORTHO05D008948 2.1e-78 296.6 277 59.6
Ca_18212_v3 Cicer arietinum L. HOM05D007103 ORTHO05D008948 2.1e-78 296.6 268 60.8
Gohir.D01G137900 Gossypium hirsutum HOM05D007103 ORTHO05D008948 1.0e-77 294.3 274 58.8
Gorai.002G168100 Gossypium raimondii HOM05D007103 ORTHO05D008948 1.0e-77 294.3 274 59.1
MD13G1010500 Malus domestica HOM05D007103 ORTHO05D008948 8.7e-77 291.2 288 59.7
HPP92_022082 Vanilla planifolia HOM05D007103 ORTHO05D008948 1.5e-76 290.4 278 61.2
Lj4g0001083 Lotus japonicus HOM05D007103 ORTHO05D008948 4.3e-76 288.9 271 60.1
ATR0618G149 Amborella trichopoda HOM05D007103 ORTHO05D008948 5.7e-76 288.5 278 56.8
Carub.0005s0121 Capsella rubella HOM05D007103 ORTHO05D008948 7.4e-76 288.1 272 58.8
Psat7g086680 Pisum sativum HOM05D007103 ORTHO05D008948 7.4e-76 288.1 271 59.4
Aa31LG2G7810 Aethionema arabicum HOM05D007103 ORTHO05D008948 2.8e-75 286.2 278 58.3
AL5G11410 Arabidopsis lyrata HOM05D007103 ORTHO05D008948 3.7e-75 285.8 278 57.6
Gohir.A01G145152 Gossypium hirsutum HOM05D007103 ORTHO05D008948 4.8e-75 285.4 276 56.9
Lalb_Chr13g0293061 Lupinus albus HOM05D007103 ORTHO05D008948 1.4e-74 283.9 268 59.3
Sp2g13560 Schrenkiella parvula HOM05D007103 ORTHO05D008948 1.4e-74 283.9 279 57.3
CARHR144820 Cardamine hirsuta HOM05D007103 ORTHO05D008948 4.1e-74 282.3 275 57.8
VMungo0251G2627 Vigna mungo HOM05D007103 ORTHO05D008948 1.5e-73 280.4 269 59.5
ECA246G2851 Erigeron canadensis HOM05D007103 ORTHO05D008948 2.0e-73 280.0 280 57.1
Thhalv10004194m.g Eutrema salsugineum HOM05D007103 ORTHO05D008948 5.0e-72 275.4 279 56.3
FvH4_4g36300 Fragaria vesca HOM05D007103 ORTHO05D008948 6.5e-72 275.0 280 56.1
FAN12G1264 Fragaria x ananassa HOM05D007103 ORTHO05D008948 6.5e-72 275.0 280 56.1
TPR.G34765 Trifolium pratense HOM05D007103 ORTHO05D008948 8.5e-72 274.6 272 58.5
AT2G02148 Arabidopsis thaliana HOM05D007103 ORTHO05D008948 1.1e-71 274.2 280 56.4
BolC9t55934H Brassica oleracea HOM05D007103 ORTHO05D008948 1.1e-71 274.2 296 54.1
BcaC04g21529 Brassica carinata HOM05D007103 ORTHO05D008948 1.4e-71 273.9 273 57.9
C09p30690 Brassica napus HOM05D007103 ORTHO05D008948 3.2e-71 272.7 273 57.5
FAN07G2615 Fragaria x ananassa HOM05D007103 ORTHO05D008948 3.2e-71 272.7 280 55.4
FAN17G1256 Fragaria x ananassa HOM05D007103 ORTHO05D008948 4.2e-71 272.3 284 56.7
Aqoxy3G00022 Aquilegia oxysepala HOM05D007103 ORTHO05D008948 1.2e-70 270.8 211 65.9
BraA09t37988Z Brassica rapa HOM05D007103 ORTHO05D008948 1.2e-70 270.8 276 56.2
Glyma.08G090600 Glycine max HOM05D007103 ORTHO05D008948 2.7e-70 269.6 209 67.5
A09p23820 Brassica napus HOM05D007103 ORTHO05D008948 4.6e-70 268.9 276 55.8
PSO478G2004 Papaver somniferum HOM05D007103 ORTHO05D008948 3.0e-69 266.2 276 58.3
FAN22G0934 Fragaria x ananassa HOM05D007103 ORTHO05D008948 5.1e-69 265.4 276 54.7
BcaB07g30707 Brassica carinata HOM05D007103 ORTHO05D008948 6.7e-69 265.0 278 55.4
Sc03g0005470 Simmondsia chinensis HOM05D007103 ORTHO05D008948 6.9e-66 255.0 273 54.6
AUR62017776 Chenopodium quinoa HOM05D007103 ORTHO05D008948 7.2e-63 245.0 217 59.4
AUR62003469 Chenopodium quinoa HOM05D007103 ORTHO05D008948 2.7e-62 243.0 262 53.8
BcaB07g30709 Brassica carinata HOM05D007103 ORTHO05D008948 2.0e-60 236.9 268 52.6
PSO017G4620 Papaver somniferum HOM05D007103 ORTHO05D008948 2.6e-60 236.5 195 64.6
Zm00001eb228800 Zea mays HOM05D007103 ORTHO05D008948 2.6e-60 236.5 208 58.7
SEGI_34932 Sequoiadendron giganteum HOM05D007103 ORTHO05D008948 9.7e-60 234.6 215 57.7
EL10Ac6g15409 Beta vulgaris HOM05D007103 ORTHO05D008948 7.5e-52 208.4 341 42.2
Mapoly0001s0015 Marchantia polymorpha HOM05D007103 ORTHO05D008948 2.2e-51 206.8 271 44.6
SMO358G0481 Selaginella moellendorffii HOM05D007103 ORTHO05D008948 2.2e-51 206.8 284 43.3
Actinidia25204 Actinidia chinensis HOM05D007103 ORTHO05D008948 1.9e-47 193.7 117 82.1
Pp3c6_26300 Physcomitrium patens HOM05D007103 ORTHO05D008948 1.2e-46 191.0 299 39.8
Pp3c5_2140 Physcomitrium patens HOM05D007103 ORTHO05D008948 4.7e-46 189.1 301 40.9
Cpa.g.sc2.105 Carica papaya HOM05D007103 ORTHO05D008948 2.6e-44 183.3 214 50.9
CBR_g70721 Chara braunii HOM05D007103 ORTHO05D008948 2.2e-40 170.2 226 42.0
AagrBONN_evm.TU.Sc2ySwM_368.3256 Anthoceros agrestis HOM05D007103 ORTHO05D008948 3.8e-40 169.5 166 52.4
Atru.chr11.1054 Acer truncatum HOM05D007103 ORTHO05D008948 4.9e-35 152.5 279 41.2
Medtr5g010860 Medicago truncatula HOM05D007103 ORTHO05D008948 6.1e-30 135.6 93 73.1
Pp3c6_29570 Physcomitrium patens HOM05D007103 ORTHO05D008948 4.0e-29 132.9 192 39.6
Actinidia31381 Actinidia chinensis HOM05D007103 ORTHO05D008948 1.1e-18 98.2 102 55.9
Medtr6g043130 Medicago truncatula HOM05D007103 ORTHO05D008948 6.0e-09 65.9 43 69.8


User provided reference genes

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