Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow2G1629 Salvia bowleyana HOM05D001128 ORTHO05D000721 8.5e-163 577.0 308 100.0
MSTRG.17824 Avicennia marina HOM05D001128 ORTHO05D000721 3.0e-59 233.0 332 50.9
MSTRG.12657 Avicennia marina HOM05D001128 ORTHO05D000721 1.3e-49 201.1 329 49.5
Migut.N00909 Erythranthe guttata HOM05D001128 ORTHO05D000721 5.3e-48 195.7 328 45.7
SGA_v2.0_scaffold199G41168 Striga asiatica HOM05D001128 ORTHO05D000721 4.0e-35 152.9 333 41.7
SalBow6G5821 Salvia bowleyana HOM05D001128 ORTHO05D000721 7.0e-32 142.1 331 38.1
CAN.G394.85 Capsicum annuum HOM05D001128 ORTHO05D000721 4.1e-24 116.3 330 35.2
Dinv43012 Davidia involucrata HOM05D001128 ORTHO05D000721 7.8e-23 112.1 287 38.3
Dinv43085 Davidia involucrata HOM05D001128 ORTHO05D000721 7.8e-23 112.1 287 38.3
Lsat_1_v5_gn_8_72501 Lactuca sativa HOM05D001128 ORTHO05D000721 1.3e-22 111.3 303 35.6
Peaxi162Scf00481g00624 Petunia axillaris HOM05D001128 ORTHO05D000721 1.3e-22 111.3 322 37.6
PGSC0003DMG400030336 Solanum tuberosum HOM05D001128 ORTHO05D000721 5.0e-22 109.4 328 36.0
Dinv17068 Davidia involucrata HOM05D001128 ORTHO05D000721 1.1e-21 108.2 297 36.4
Nitab4.5_0009885g0020 Nicotiana tabacum HOM05D001128 ORTHO05D000721 1.9e-21 107.5 332 34.9
CSS0027233 Camellia sinensis var. sinensis HOM05D001128 ORTHO05D000721 9.5e-21 105.1 294 34.4
HanXRQChr08g0212731 Helianthus annuus HOM05D001128 ORTHO05D000721 1.2e-20 104.8 297 35.4
SGA_v2.0_scaffold104G30158 Striga asiatica HOM05D001128 ORTHO05D000721 1.2e-20 104.8 241 41.9
Actinidia12878 Actinidia chinensis HOM05D001128 ORTHO05D000721 2.1e-20 104.0 282 34.4
Sopen06g032900 Solanum pennellii HOM05D001128 ORTHO05D000721 2.8e-20 103.6 329 33.4
ECA236G1683 Erigeron canadensis HOM05D001128 ORTHO05D000721 3.6e-20 103.2 352 33.0
Rhsim13G0075900 Rhododendron simsii HOM05D001128 ORTHO05D000721 2.3e-19 100.5 308 36.0
Nitab4.5_0000744g0010 Nicotiana tabacum HOM05D001128 ORTHO05D000721 8.9e-19 98.6 343 34.1
Solyc06g076490.3 Solanum lycopersicum HOM05D001128 ORTHO05D000721 2.0e-18 97.4 331 32.6
CSS0032417 Camellia sinensis var. sinensis HOM05D001128 ORTHO05D000721 4.9e-17 92.8 295 33.6
vmacro03017 Vaccinium macrocarpon HOM05D001128 ORTHO05D000721 4.9e-17 92.8 337 32.9
Cc01_g13540 Coffea canephora HOM05D001128 ORTHO05D000721 1.4e-16 91.3 345 31.6
unitig_746.g26718 Utricularia gibba HOM05D001128 ORTHO05D000721 9.2e-16 88.6 246 38.2
Dinv34306 Davidia involucrata HOM05D001128 ORTHO05D000721 1.0e-14 85.1 243 35.0
Oeu007672.1 Olea europaea HOM05D001128 ORTHO05D000721 5.1e-14 82.8 223 36.8
BcaB08g36278 Brassica carinata HOM05D009319 ORTHO05D000721 1.1e-13 81.6 294 31.6
C09p51480 Brassica napus HOM05D009319 ORTHO05D000721 2.5e-13 80.5 294 30.6
BolC9t58007H Brassica oleracea HOM05D009319 ORTHO05D000721 2.5e-13 80.5 294 30.6
Gohir.A03G046700 Gossypium hirsutum HOM05D001128 ORTHO05D000721 5.6e-13 79.3 259 32.0
BcaC04g19808 Brassica carinata HOM05D009319 ORTHO05D000721 7.3e-13 79.0 294 30.6
Manes.02G125700 Manihot esculenta HOM05D001128 ORTHO05D000721 9.5e-13 78.6 328 28.0
Gorai.003G127200 Gossypium raimondii HOM05D001128 ORTHO05D000721 2.8e-12 77.0 261 31.4
TAR623G0478 Trochodendron aralioides HOM05D001128 ORTHO05D000721 2.8e-12 77.0 115 44.3
BcaC03g14030 Brassica carinata HOM05D009319 ORTHO05D000721 1.1e-11 75.1 292 31.5
BolC2t07368H Brassica oleracea HOM05D009319 ORTHO05D000721 1.1e-11 75.1 292 31.5
C02p12700 Brassica napus HOM05D009319 ORTHO05D000721 1.4e-11 74.7 297 31.0
TWI75G1051 Tripterygium wilfordii HOM05D001128 ORTHO05D000721 1.4e-11 74.7 297 30.6
Gohir.D03G120500 Gossypium hirsutum HOM05D001128 ORTHO05D000721 1.8e-11 74.3 261 31.4
BraA02t05807Z Brassica rapa HOM05D009319 ORTHO05D000721 6.8e-11 72.4 297 31.0
BraA10t43727Z Brassica rapa HOM05D009319 ORTHO05D000721 6.8e-11 72.4 294 30.3
Duzib168G0052 Durio zibethinus HOM05D001128 ORTHO05D000721 6.8e-11 72.4 324 29.0
Sp6g20920 Schrenkiella parvula HOM05D009319 ORTHO05D000721 6.8e-11 72.4 295 29.5
A10p16430 Brassica napus HOM05D009319 ORTHO05D000721 8.9e-11 72.0 294 30.3
TWI79G1361 Tripterygium wilfordii HOM05D001128 ORTHO05D000721 1.5e-10 71.2 290 30.0
A03p11830 Brassica napus HOM05D009319 ORTHO05D000721 2.0e-10 70.9 293 31.4
TAR369G0849 Trochodendron aralioides HOM05D001128 ORTHO05D000721 2.6e-10 70.5 118 44.1
Potri.009G038600 Populus trichocarpa HOM05D001128 ORTHO05D000721 3.4e-10 70.1 327 28.7
THA.LOC104810743 Tarenaya hassleriana HOM05D009319 ORTHO05D000721 5.8e-10 69.3 303 28.4
GSVIVG01016431001 Vitis vinifera HOM05D001128 ORTHO05D000721 5.8e-10 69.3 116 40.5
Lsat_1_v5_gn_5_168381 Lactuca sativa HOM05D001128 ORTHO05D000721 7.5e-10 68.9 181 38.7
Manes.01G167300 Manihot esculenta HOM05D001128 ORTHO05D000721 7.5e-10 68.9 305 28.5
Oeu001830.1 Olea europaea HOM05D001128 ORTHO05D000721 7.5e-10 68.9 124 40.3
Oeu032139.1 Olea europaea HOM05D001128 ORTHO05D000721 7.5e-10 68.9 84 59.5
TAR636G2726 Trochodendron aralioides HOM05D001128 ORTHO05D000721 7.5e-10 68.9 331 31.7
MSTRG.19049 Avicennia marina HOM05D001128 ORTHO05D000721 9.9e-10 68.6 159 36.5
CDE02G1727 Ceratophyllum demersum HOM05D001128 ORTHO05D000721 9.9e-10 68.6 114 41.2
Gohir.D05G092700 Gossypium hirsutum HOM05D001128 ORTHO05D000721 9.9e-10 68.6 340 29.1
PSO339G4622 Papaver somniferum HOM05D001128 ORTHO05D000721 9.9e-10 68.6 113 41.6
PSO384G2375 Papaver somniferum HOM05D001128 ORTHO05D000721 9.9e-10 68.6 113 41.6
CARHR285570 Cardamine hirsuta HOM05D009319 ORTHO05D000721 1.3e-09 68.2 294 31.0
Gohir.A05G091900 Gossypium hirsutum HOM05D001128 ORTHO05D000721 1.3e-09 68.2 303 30.7
Cpa.g.sc81.51 Carica papaya HOM05D001128 ORTHO05D000721 1.7e-09 67.8 332 31.3
AT5G59050 Arabidopsis thaliana HOM05D009319 ORTHO05D000721 2.2e-09 67.4 312 31.4
HanXRQChr05g0149921 Helianthus annuus HOM05D001128 ORTHO05D000721 2.2e-09 67.4 152 37.5
Oeu018335.1 Olea europaea HOM05D001128 ORTHO05D000721 2.2e-09 67.4 118 40.7
TAR633G0212 Trochodendron aralioides HOM05D001128 ORTHO05D000721 2.2e-09 67.4 158 34.8
HanXRQChr06g0176291 Helianthus annuus HOM05D001128 ORTHO05D000721 2.9e-09 67.0 145 36.6
Hma1.2p1_1521F.1_g288670 Hydrangea macrophylla HOM05D001128 ORTHO05D000721 2.9e-09 67.0 122 37.7
Mapoly0094s0056 Marchantia polymorpha HOM05D001128 ORTHO05D000721 3.7e-09 66.6 150 37.3
Nn2g13535 Nelumbo nucifera HOM05D001128 ORTHO05D000721 3.7e-09 66.6 121 39.7
Atru.chr3.4033 Acer truncatum HOM05D001128 ORTHO05D000721 6.4e-09 65.9 343 26.8
MSTRG.5621 Avicennia marina HOM05D001128 ORTHO05D000721 6.4e-09 65.9 115 37.4
Cfa017294 Carpinus fangiana HOM05D001128 ORTHO05D000721 6.4e-09 65.9 118 39.8
FAN21G1564 Fragaria x ananassa HOM05D001128 ORTHO05D000721 6.4e-09 65.9 333 30.3
Manes.07G123000 Manihot esculenta HOM05D001128 ORTHO05D000721 6.4e-09 65.9 118 37.3
Migut.J00260 Erythranthe guttata HOM05D001128 ORTHO05D000721 1.1e-08 65.1 114 39.5
vmacro07011 Vaccinium macrocarpon HOM05D001128 ORTHO05D000721 1.1e-08 65.1 157 35.0
MSTRG.10240 Avicennia marina HOM05D001128 ORTHO05D000721 1.4e-08 64.7 162 35.2
Carub.0008s1989 Capsella rubella HOM05D009319 ORTHO05D000721 1.4e-08 64.7 291 30.9
COL.COLO4_14683 Corchorus olitorius HOM05D001128 ORTHO05D000721 1.4e-08 64.7 117 40.2
FAN16G1449 Fragaria x ananassa HOM05D001128 ORTHO05D000721 1.4e-08 64.7 130 40.8
Gorai.009G095300 Gossypium raimondii HOM05D001128 ORTHO05D000721 1.4e-08 64.7 338 28.4
Sabra09G0027500 Salix brachista HOM05D001128 ORTHO05D000721 1.4e-08 64.7 338 27.5
Thecc.09G311600 Theobroma cacao HOM05D001128 ORTHO05D000721 1.4e-08 64.7 320 28.1
ATR0210G013 Amborella trichopoda HOM05D001128 ORTHO05D000721 1.9e-08 64.3 122 37.7
Eucgr.J01995 Eucalyptus grandis HOM05D001128 ORTHO05D000721 1.9e-08 64.3 305 29.2
Thhalv10014238m.g Eutrema salsugineum HOM05D009319 ORTHO05D000721 1.9e-08 64.3 298 27.5
Lsat_1_v5_gn_8_80861 Lactuca sativa HOM05D001128 ORTHO05D000721 1.9e-08 64.3 168 35.1
Oeu024612.2 Olea europaea HOM05D001128 ORTHO05D000721 1.9e-08 64.3 120 37.5
Psat5g286040 Pisum sativum HOM05D001128 ORTHO05D000721 1.9e-08 64.3 265 29.8
C03p13890 Brassica napus HOM05D009319 ORTHO05D000721 2.4e-08 63.9 293 30.0
CSS0047983 Camellia sinensis var. sinensis HOM05D001128 ORTHO05D000721 2.4e-08 63.9 64 51.6
Haze_20899 Corylus avellana HOM05D001128 ORTHO05D000721 2.4e-08 63.9 118 39.8
Dinv34448 Davidia involucrata HOM05D001128 ORTHO05D000721 2.4e-08 63.9 114 36.8
Dinv37107 Davidia involucrata HOM05D001128 ORTHO05D000721 2.4e-08 63.9 117 37.6
Peaxi162Scf00009g03319 Petunia axillaris HOM05D001128 ORTHO05D000721 2.4e-08 63.9 146 34.2
BraA03t10494Z Brassica rapa HOM05D009319 ORTHO05D000721 3.2e-08 63.5 293 30.0
Glyma.13G339500 Glycine max HOM05D001128 ORTHO05D000721 3.2e-08 63.5 277 28.9
Potri.010G195800 Populus trichocarpa HOM05D001128 ORTHO05D000721 3.2e-08 63.5 119 37.8
BolC3t13836H Brassica oleracea HOM05D009319 ORTHO05D000721 4.1e-08 63.2 293 29.7
Hma1.2p1_0026F.1_g016650 Hydrangea macrophylla HOM05D001128 ORTHO05D000721 4.1e-08 63.2 112 37.5
CiPaw.09G202700 Carya illinoinensis HOM05D001128 ORTHO05D000721 5.4e-08 62.8 152 37.5
Glyma.15G034900 Glycine max HOM05D001128 ORTHO05D000721 5.4e-08 62.8 243 30.9
unitig_899.g15262 Utricularia gibba HOM05D001128 ORTHO05D000721 5.4e-08 62.8 115 40.0
Atru.chr8.2106 Acer truncatum HOM05D001128 ORTHO05D000721 7.1e-08 62.4 123 37.4
TPR.G6832 Trifolium pratense HOM05D001128 ORTHO05D000721 7.1e-08 62.4 290 30.3
Sabra08G0045800 Salix brachista HOM05D001128 ORTHO05D000721 9.2e-08 62.0 120 39.2
Actinidia13814 Actinidia chinensis HOM05D001128 ORTHO05D000721 1.2e-07 61.6 118 38.1
Hma1.2p1_0039F.1_g024950 Hydrangea macrophylla HOM05D001128 ORTHO05D000721 1.2e-07 61.6 121 40.5
PGR119G0644 Punica granatum HOM05D001128 ORTHO05D000721 1.6e-07 61.2 115 40.0
CiPaw.02G188400 Carya illinoinensis HOM05D001128 ORTHO05D000721 2.1e-07 60.8 119 35.3
Haze_24208 Corylus avellana HOM05D001128 ORTHO05D000721 2.1e-07 60.8 386 27.7
Lj3C959G13 Lonicera japonica HOM05D001128 ORTHO05D000721 2.1e-07 60.8 338 26.0
Oeu013161.1 Olea europaea HOM05D001128 ORTHO05D000721 2.1e-07 60.8 117 38.5
arahy.Tifrunner.gnm1.ann1.BMML80 Arachis hypogaea HOM05D001128 ORTHO05D000721 2.7e-07 60.5 120 39.2
Potri.008G062200 Populus trichocarpa HOM05D001128 ORTHO05D000721 2.7e-07 60.5 120 37.5
VMungo1080G0292 Vigna mungo HOM05D001128 ORTHO05D000721 2.7e-07 60.5 265 28.3
Ca_01300_v3 Cicer arietinum L. HOM05D001128 ORTHO05D000721 3.5e-07 60.1 313 28.1
FAN25G3787 Fragaria x ananassa HOM05D001128 ORTHO05D000721 3.5e-07 60.1 339 30.4
PGSC0003DMG400011730 Solanum tuberosum HOM05D001128 ORTHO05D000721 3.5e-07 60.1 125 39.2
Actinidia29161 Actinidia chinensis HOM05D001128 ORTHO05D000721 4.6e-07 59.7 174 33.3
Cpa.g.sc56.66 Carica papaya HOM05D001128 ORTHO05D000721 4.6e-07 59.7 122 36.1
COL.COLO4_25581 Corchorus olitorius HOM05D001128 ORTHO05D000721 4.6e-07 59.7 122 36.1
Sabra06G0070700 Salix brachista HOM05D001128 ORTHO05D000721 4.6e-07 59.7 151 33.1
Actinidia02898 Actinidia chinensis HOM05D001128 ORTHO05D000721 6.0e-07 59.3 119 37.0
CSS0004370 Camellia sinensis var. sinensis HOM05D001128 ORTHO05D000721 6.0e-07 59.3 113 35.4
CiPaw.13G086900 Carya illinoinensis HOM05D001128 ORTHO05D000721 7.8e-07 58.9 371 26.1
MELO3C003199.2 Cucumis melo HOM05D001128 ORTHO05D000721 7.8e-07 58.9 123 38.2
LjContig00047_ERROPOS266959g0024685 Lotus japonicus HOM05D001128 ORTHO05D000721 7.8e-07 58.9 124 37.9
Nn1g00216 Nelumbo nucifera HOM05D001128 ORTHO05D000721 7.8e-07 58.9 74 48.6
Nn1g00331 Nelumbo nucifera HOM05D001128 ORTHO05D000721 7.8e-07 58.9 119 37.0
Nitab4.5_0002823g0030 Nicotiana tabacum HOM05D001128 ORTHO05D000721 7.8e-07 58.9 335 27.2
Nitab4.5_0003264g0030 Nicotiana tabacum HOM05D001128 ORTHO05D000721 7.8e-07 58.9 120 37.5
CiPaw.10G150200 Carya illinoinensis HOM05D001128 ORTHO05D000721 1.0e-06 58.5 120 39.2
GSVIVG01026841001 Vitis vinifera HOM05D001128 ORTHO05D000721 1.0e-06 58.5 115 35.7
GSVIVG01038461001 Vitis vinifera HOM05D001128 ORTHO05D000721 1.0e-06 58.5 115 35.7
CsaV3_4G025740 Cucumis sativus L. HOM05D001128 ORTHO05D000721 1.3e-06 58.2 123 36.6
FvH4_3g37230 Fragaria vesca HOM05D001128 ORTHO05D000721 1.3e-06 58.2 339 29.8
Manes.10G020800 Manihot esculenta HOM05D001128 ORTHO05D000721 1.3e-06 58.2 118 34.7
arahy.Tifrunner.gnm1.ann1.KBQI3L Arachis hypogaea HOM05D001128 ORTHO05D000721 1.7e-06 57.8 158 36.1
ECA236G1029 Erigeron canadensis HOM05D001128 ORTHO05D000131 1.7e-06 57.8 55 61.8
Hma1.2p1_0671F.1_g200660 Hydrangea macrophylla HOM05D001128 ORTHO05D000721 1.7e-06 57.8 216 30.6
MBI14_g02856_MAGBIO Magnolia biondii HOM05D001128 ORTHO05D000721 1.7e-06 57.8 130 33.8
Nitab4.5_0000652g0060 Nicotiana tabacum HOM05D001128 ORTHO05D000721 1.7e-06 57.8 328 26.2
Prupe.6G265300 Prunus persica HOM05D001128 ORTHO05D000721 1.7e-06 57.8 161 36.0
Rhsim03G0138400 Rhododendron simsii HOM05D001128 ORTHO05D000721 1.7e-06 57.8 128 36.7
Cpa.g.sc19.247 Carica papaya HOM05D001128 ORTHO05D000721 2.3e-06 57.4 117 37.6
Cfa011590 Carpinus fangiana HOM05D001128 ORTHO05D000721 2.3e-06 57.4 329 28.3
Ciclev10011799m.g Citrus clementina HOM05D001128 ORTHO05D000721 2.3e-06 57.4 364 28.8
Glyma.18G191000 Glycine max HOM05D001128 ORTHO05D000721 2.3e-06 57.4 167 35.9
CSS0013156 Camellia sinensis var. sinensis HOM05D001128 ORTHO05D000721 3.0e-06 57.0 170 32.9
Phvul.L008643 Phaseolus vulgaris HOM05D001128 ORTHO05D000721 3.0e-06 57.0 261 29.1
Potri.016G105000 Populus trichocarpa HOM05D001128 ORTHO05D000721 3.0e-06 57.0 120 36.7
Aqoxy1G00786 Aquilegia oxysepala HOM05D001128 ORTHO05D000721 3.9e-06 56.6 123 35.8
arahy.Tifrunner.gnm1.ann1.E0Q1QR Arachis hypogaea HOM05D001128 ORTHO05D000721 3.9e-06 56.6 119 37.8
BcaB01g04601 Brassica carinata HOM05D009319 ORTHO05D000721 3.9e-06 56.6 245 29.8
CSS0030928 Camellia sinensis var. sinensis HOM05D001128 ORTHO05D000721 3.9e-06 56.6 170 32.9
DCAR_005928 Daucus carota HOM05D001128 ORTHO05D000721 3.9e-06 56.6 260 27.3
Glyma.07G141000 Glycine max HOM05D001128 ORTHO05D000721 3.9e-06 56.6 164 37.2
Lalb_Chr19g0124971 Lupinus albus HOM05D001128 ORTHO05D000721 3.9e-06 56.6 116 38.8
Hund16030 Selenicereus undatus HOM05D001128 ORTHO05D000721 3.9e-06 56.6 70 48.6
SalBow1G2079 Salvia bowleyana HOM05D001128 ORTHO05D000721 5.1e-06 56.2 117 35.9
ECA247G0052 Erigeron canadensis HOM05D001128 ORTHO05D000721 6.6e-06 55.8 275 27.6
Lalb_Chr14g0372071 Lupinus albus HOM05D001128 ORTHO05D000721 6.6e-06 55.8 120 36.7
Os01g0850000 Oryza sativa ssp. japonica HOM05D001128 ORTHO05D000721 6.6e-06 55.8 128 36.7
SEGI_15940 Sequoiadendron giganteum HOM05D001128 ORTHO05D000721 6.6e-06 55.8 120 35.0
Solyc09g011690.4 Solanum lycopersicum HOM05D001128 ORTHO05D000721 6.6e-06 55.8 155 35.5
Oeu009915.1 Olea europaea HOM05D001128 ORTHO05D000721 8.6e-06 55.5 119 36.1
Sopen09g006510 Solanum pennellii HOM05D001128 ORTHO05D000721 8.6e-06 55.5 125 37.6
unitig_37.g12670 Utricularia gibba HOM05D009319 ORTHO05D000721 8.6e-06 55.5 268 26.9


User provided reference genes

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