Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow2G1408 Salvia bowleyana HOM05D005102 ORTHO05D006090 2.7e-90 335.5 194 100.0
Oeu047122.2 Olea europaea HOM05D005102 ORTHO05D006090 3.8e-68 261.9 183 80.3
Migut.G00562 Erythranthe guttata HOM05D005102 ORTHO05D006090 7.2e-67 257.7 182 81.3
SGA_v2.0_scaffold193G40717 Striga asiatica HOM05D005102 ORTHO05D006090 3.0e-65 252.3 183 79.2
MSTRG.9850 Avicennia marina HOM05D005102 ORTHO05D006090 4.0e-65 251.9 183 82.0
Nitab4.5_0005154g0050 Nicotiana tabacum HOM05D005102 ORTHO05D006090 2.4e-62 242.7 185 75.1
SGA_v2.0_scaffold454G51888 Striga asiatica HOM05D005102 ORTHO05D006090 4.1e-62 241.9 183 76.5
SGA_v2.0_scaffold127G34013 Striga asiatica HOM05D005102 ORTHO05D006090 5.4e-62 241.5 183 79.8
Nitab4.5_0001041g0140 Nicotiana tabacum HOM05D005102 ORTHO05D006090 4.5e-61 238.4 182 75.3
Peaxi162Scf00531g00334 Petunia axillaris HOM05D005102 ORTHO05D006090 2.9e-60 235.7 189 72.5
Dinv27121 Davidia involucrata HOM05D005102 ORTHO05D006090 1.7e-55 219.9 183 69.4
COL.COLO4_15983 Corchorus olitorius HOM05D005102 ORTHO05D006090 3.7e-55 218.8 183 68.9
Manes.03G102500 Manihot esculenta HOM05D005102 ORTHO05D006090 4.9e-55 218.4 183 68.9
Actinidia37761 Actinidia chinensis HOM05D005102 ORTHO05D006090 1.8e-54 216.5 183 67.8
Duzib052G0859 Durio zibethinus HOM05D005102 ORTHO05D006090 1.8e-54 216.5 183 68.9
PGSC0003DMG400001501 Solanum tuberosum HOM05D005102 ORTHO05D006090 4.1e-54 215.3 195 69.7
Cc03_g06480 Coffea canephora HOM05D005102 ORTHO05D006090 5.4e-54 214.9 186 68.8
Thecc.04G266700 Theobroma cacao HOM05D005102 ORTHO05D006090 2.0e-53 213.0 183 67.2
Gorai.005G054400 Gossypium raimondii HOM05D005102 ORTHO05D006090 2.7e-53 212.6 183 66.1
Gohir.A02G043600 Gossypium hirsutum HOM05D005102 ORTHO05D006090 3.5e-53 212.2 183 65.6
Prupe.5G230500 Prunus persica HOM05D005102 ORTHO05D006090 1.0e-52 210.7 183 66.1
Gohir.D02G049200 Gossypium hirsutum HOM05D005102 ORTHO05D006090 1.7e-52 209.9 183 66.1
HanXRQChr01g0011201 Helianthus annuus HOM05D005102 ORTHO05D006090 2.9e-52 209.1 182 68.1
Sopen09g033820 Solanum pennellii HOM05D005102 ORTHO05D006090 2.9e-52 209.1 184 70.7
VMungo0540G0767 Vigna mungo HOM05D005102 ORTHO05D006090 3.8e-52 208.8 182 66.5
Cfa014795 Carpinus fangiana HOM05D005102 ORTHO05D006090 8.6e-52 207.6 181 66.9
Ciclev10005541m.g Citrus clementina HOM05D005102 ORTHO05D006090 1.1e-51 207.2 183 66.1
Ca_11361_v3 Cicer arietinum L. HOM05D005102 ORTHO05D006090 2.5e-51 206.1 182 67.6
Haze_11479 Corylus avellana HOM05D005102 ORTHO05D006090 2.5e-51 206.1 181 66.3
Phvul.006G133300 Phaseolus vulgaris HOM05D005102 ORTHO05D006090 3.3e-51 205.7 182 65.4
Solyc09g090860.4 Solanum lycopersicum HOM05D005102 ORTHO05D006090 4.3e-51 205.3 184 69.6
TPR.G17506 Trifolium pratense HOM05D005102 ORTHO05D006090 4.3e-51 205.3 182 67.0
Psat1g170520 Pisum sativum HOM05D005102 ORTHO05D006090 5.6e-51 204.9 182 65.4
FAN13G1436 Fragaria x ananassa HOM05D005102 ORTHO05D006090 7.3e-51 204.5 183 65.0
Glyma.15G125200 Glycine max HOM05D005102 ORTHO05D006090 1.6e-50 203.4 182 64.8
TWI09G0526 Tripterygium wilfordii HOM05D005102 ORTHO05D006090 1.6e-50 203.4 183 66.1
FAN08G3625 Fragaria x ananassa HOM05D005102 ORTHO05D006090 2.1e-50 203.0 183 64.5
Lsat_1_v5_gn_1_75501 Lactuca sativa HOM05D005102 ORTHO05D006090 2.1e-50 203.0 182 65.4
CSS0019941 Camellia sinensis var. sinensis HOM05D005102 ORTHO05D006090 3.6e-50 202.2 170 69.4
CSS0043447 Camellia sinensis var. sinensis HOM05D005102 ORTHO05D006090 3.6e-50 202.2 170 69.4
Eucgr.K00416 Eucalyptus grandis HOM05D005102 ORTHO05D006090 4.7e-50 201.8 182 65.4
THA.LOC104808740 Tarenaya hassleriana HOM05D005102 ORTHO05D006090 4.7e-50 201.8 183 63.9
FAN04G2658 Fragaria x ananassa HOM05D005102 ORTHO05D006090 6.1e-50 201.4 183 63.9
CANSAT78G2207 Cannabis sativa HOM05D005102 ORTHO05D006090 8.0e-50 201.1 182 64.8
FAN18G4219 Fragaria x ananassa HOM05D005102 ORTHO05D006090 8.0e-50 201.1 183 63.9
Aqoxy5G00133 Aquilegia oxysepala HOM05D005102 ORTHO05D006090 1.8e-49 199.9 183 65.0
FvH4_5g17100 Fragaria vesca HOM05D005102 ORTHO05D006090 2.3e-49 199.5 183 63.4
Psat7g046400 Pisum sativum HOM05D005102 ORTHO05D006090 5.2e-49 198.4 182 65.4
Lj6A637G59 Lonicera japonica HOM05D005102 ORTHO05D006090 6.8e-49 198.0 183 65.0
Atru.chr12.1207 Acer truncatum HOM05D005102 ORTHO05D006090 8.9e-49 197.6 182 64.3
CAN.G812.17 Capsicum annuum HOM05D005102 ORTHO05D006090 8.9e-49 197.6 182 68.1
Glyma.09G019100 Glycine max HOM05D005102 ORTHO05D006090 8.9e-49 197.6 182 63.7
arahy.Tifrunner.gnm1.ann1.Z186RR Arachis hypogaea HOM05D005102 ORTHO05D006090 1.5e-48 196.8 184 63.0
EL10Ac3g06678 Beta vulgaris HOM05D005102 ORTHO05D006090 2.6e-48 196.1 182 62.6
RcHm_v2.0_Chr7g0178711 Rosa chinensis HOM05D005102 ORTHO05D006090 4.4e-48 195.3 183 66.1
CiPaw.01G176900 Carya illinoinensis HOM05D005102 ORTHO05D006090 7.5e-48 194.5 183 63.9
QL08p018871 Quercus lobata HOM05D005102 ORTHO05D006090 1.7e-47 193.4 182 63.7
Lj6g0009036 Lotus japonicus HOM05D005102 ORTHO05D006090 2.2e-47 193.0 182 63.2
Medtr2g028660 Medicago truncatula HOM05D005102 ORTHO05D006090 2.2e-47 193.0 200 59.5
THA.LOC104810405 Tarenaya hassleriana HOM05D005102 ORTHO05D006090 2.2e-47 193.0 181 63.0
BolC7t41674H Brassica oleracea HOM05D005102 ORTHO05D006090 3.7e-47 192.2 183 61.2
CDE09G0962 Ceratophyllum demersum HOM05D005102 ORTHO05D006090 3.7e-47 192.2 183 62.3
Lj3g0001784 Lotus japonicus HOM05D005102 ORTHO05D006090 3.7e-47 192.2 182 63.2
Nn3g19843 Nelumbo nucifera HOM05D005102 ORTHO05D006090 3.7e-47 192.2 183 61.7
DCAR_030764 Daucus carota HOM05D005102 ORTHO05D006090 4.9e-47 191.8 183 63.4
BcaC06g35682 Brassica carinata HOM05D005102 ORTHO05D006090 6.4e-47 191.4 183 61.2
C07p12060 Brassica napus HOM05D005102 ORTHO05D006090 6.4e-47 191.4 183 61.2
QL06p021548 Quercus lobata HOM05D005102 ORTHO05D006090 8.3e-47 191.0 182 62.6
Carub.0003s2465 Capsella rubella HOM05D005102 ORTHO05D006090 1.1e-46 190.7 183 61.7
Thhalv10002630m.g Eutrema salsugineum HOM05D005102 ORTHO05D006090 1.1e-46 190.7 183 60.7
AL3G39760 Arabidopsis lyrata HOM05D005102 ORTHO05D006090 4.1e-46 188.7 183 60.1
BcaB06g26613 Brassica carinata HOM05D005102 ORTHO05D006090 4.1e-46 188.7 183 60.7
TAR365G0288 Trochodendron aralioides HOM05D005102 ORTHO05D006090 4.1e-46 188.7 184 60.9
Aa31LG8G11040 Aethionema arabicum HOM05D005102 ORTHO05D006090 5.4e-46 188.3 183 59.6
BraA07t28587Z Brassica rapa HOM05D005102 ORTHO05D006090 5.4e-46 188.3 183 60.7
Ah.10g026170 Amaranthus hybridus HOM05D005102 ORTHO05D006090 9.2e-46 187.6 183 60.1
A07p08000 Brassica napus HOM05D005102 ORTHO05D006090 9.2e-46 187.6 183 60.7
AT3G24315 Arabidopsis thaliana HOM05D005102 ORTHO05D006090 1.2e-45 187.2 183 60.1
ATR0787G185 Amborella trichopoda HOM05D005102 ORTHO05D006090 1.6e-45 186.8 183 59.6
CARHR100410 Cardamine hirsuta HOM05D005102 ORTHO05D006090 4.6e-45 185.3 183 60.1
AUR62018036 Chenopodium quinoa HOM05D005102 ORTHO05D006090 1.0e-44 184.1 183 59.6
Sp3g22120 Schrenkiella parvula HOM05D005102 ORTHO05D006090 1.3e-44 183.7 183 59.0
MD06G1229400 Malus domestica HOM05D005102 ORTHO05D006090 3.0e-44 182.6 183 59.0
Sc13g0003090 Simmondsia chinensis HOM05D005102 ORTHO05D006090 5.0e-44 181.8 183 59.6
CDE02G3615 Ceratophyllum demersum HOM05D005102 ORTHO05D006090 3.3e-43 179.1 183 59.0
GSVIVG01027934001 Vitis vinifera HOM05D005102 ORTHO05D006090 4.3e-43 178.7 182 58.2
BcaC01g03326 Brassica carinata HOM05D005102 ORTHO05D006090 7.3e-43 177.9 183 58.5
C03p53630 Brassica napus HOM05D005102 ORTHO05D006090 7.3e-43 177.9 183 58.5
Potri.010G064900 Populus trichocarpa HOM05D005102 ORTHO05D006090 1.2e-42 177.2 183 60.1
AUR62015240 Chenopodium quinoa HOM05D005102 ORTHO05D006090 2.1e-42 176.4 170 60.0
Zm00001eb238020 Zea mays HOM05D005102 ORTHO05D006090 6.2e-42 174.9 191 56.5
Lalb_Chr06g0169571 Lupinus albus HOM05D005102 ORTHO05D006090 3.1e-41 172.6 182 59.3
Os02g0658900 Oryza sativa ssp. japonica HOM05D005102 ORTHO05D006090 1.2e-40 170.6 191 56.5
Hund22254 Selenicereus undatus HOM05D005102 ORTHO05D006090 4.4e-40 168.7 258 46.1
Sed0020820 Sechium edule HOM05D005102 ORTHO05D006090 5.8e-40 168.3 183 57.4
BolC3t17623H Brassica oleracea HOM05D005102 ORTHO05D006090 7.5e-40 167.9 191 55.5
Rhsim01G0226300 Rhododendron simsii HOM05D005102 ORTHO05D006090 7.5e-40 167.9 206 53.9
A03p43600 Brassica napus HOM05D005102 ORTHO05D006090 9.8e-40 167.5 182 58.8
ClCG06G002570 Citrullus lanatus HOM05D005102 ORTHO05D006090 8.3e-39 164.5 183 58.5
HPP92_021768 Vanilla planifolia HOM05D005102 ORTHO05D006090 3.2e-38 162.5 183 54.1
Sabra10G0042100 Salix brachista HOM05D005102 ORTHO05D006090 9.2e-38 161.0 183 55.7
PSO170G5569 Papaver somniferum HOM05D005102 ORTHO05D006090 2.0e-37 159.8 182 55.5
PSO302G0040 Papaver somniferum HOM05D005102 ORTHO05D006090 2.0e-37 159.8 182 55.5
PSO832G1873 Papaver somniferum HOM05D005102 ORTHO05D006090 4.6e-37 158.7 181 56.9
TWI63G1490 Tripterygium wilfordii HOM05D005102 ORTHO05D006090 1.7e-36 156.8 183 55.7
vmacro20979 Vaccinium macrocarpon HOM05D005102 ORTHO05D006090 1.9e-35 153.3 183 56.3
CsaV3_6G008560 Cucumis sativus L. HOM05D005102 ORTHO05D006090 1.6e-34 150.2 183 55.2
PSO764G0108 Papaver somniferum HOM05D005102 ORTHO05D006090 6.2e-34 148.3 183 54.6
unitig_748.g8293 Utricularia gibba HOM05D005102 ORTHO05D006090 6.2e-34 148.3 129 65.9
Zm00001eb048840 Zea mays HOM05D005102 ORTHO05D006090 6.8e-33 144.8 170 54.7
SEGI_01035 Sequoiadendron giganteum HOM05D005102 ORTHO05D006090 2.0e-32 143.3 181 49.2
MELO3C022272.2 Cucumis melo HOM05D005102 ORTHO05D006090 5.1e-28 128.6 183 49.2
Mapoly0019s0137 Marchantia polymorpha HOM05D005102 ORTHO05D006090 1.1e-27 127.5 179 45.8
AagrBONN_evm.TU.Sc2ySwM_228.1541 Anthoceros agrestis HOM05D005102 ORTHO05D006090 5.2e-25 118.6 177 42.9
AagrBONN_evm.TU.Sc2ySwM_368.1701 Anthoceros agrestis HOM05D005102 ORTHO05D006090 5.2e-25 118.6 177 42.9
Dinv30772 Davidia involucrata HOM05D005102 ORTHO05D006090 3.4e-24 115.9 91 79.1
SMO364G0891 Selaginella moellendorffii HOM05D005102 ORTHO05D006090 3.4e-24 115.9 177 41.2
BraA03t13497Z Brassica rapa HOM05D005102 ORTHO05D006090 4.4e-24 115.5 180 45.6
Zm00001eb144710 Zea mays HOM05D005102 ORTHO05D006090 1.4e-22 110.5 185 42.7
vmacro04848 Vaccinium macrocarpon HOM05D005102 ORTHO05D006090 4.1e-22 109.0 80 81.2
Pp3c27_3370 Physcomitrium patens HOM05D005102 ORTHO05D006090 1.0e-20 104.4 134 47.0
Zm00001eb188010 Zea mays HOM05D005102 ORTHO05D006090 1.1e-19 100.9 126 46.0
SHI00826 Sapria himalayana HOM05D005102 ORTHO05D006090 4.0e-17 92.4 191 36.6
Zm00001eb021120 Zea mays HOM05D005102 ORTHO05D006090 3.4e-16 89.4 113 46.0
Pp3c16_3280 Physcomitrium patens HOM05D005102 ORTHO05D006090 7.6e-16 88.2 195 34.4
Zm00001eb156410 Zea mays HOM05D005102 ORTHO05D006090 9.9e-16 87.8 113 45.1
Zm00001eb291560 Zea mays HOM05D005102 ORTHO05D006090 4.9e-15 85.5 113 45.1
CBR_g37523 Chara braunii HOM05D005102 ORTHO05D006090 3.2e-14 82.8 128 43.8
Cpa.g.sc59.14 Carica papaya HOM05D005102 ORTHO05D006090 2.7e-13 79.7 65 73.8
Zm00001eb324110 Zea mays HOM05D005102 ORTHO05D006090 1.3e-12 77.4 63 60.3
ECA247G3419 Erigeron canadensis HOM05D005102 ORTHO05D006090 2.5e-11 73.2 65 76.9
Zm00001eb402860 Zea mays HOM05D005102 ORTHO05D006090 5.8e-08 62.0 57 54.4
Zm00001eb049220 Zea mays HOM05D005102 ORTHO05D006090 7.6e-08 61.6 50 58.0
Zm00001eb318660 Zea mays HOM05D005102 ORTHO05D006090 7.6e-08 61.6 50 58.0
Zm00001eb423240 Zea mays HOM05D005102 ORTHO05D006090 7.6e-08 61.6 50 58.0
Nitab4.5_0002613g0070 Nicotiana tabacum HOM05D005102 ORTHO05D006090 9.9e-08 61.2 39 92.3


User provided reference genes

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