Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow2G1262 Salvia bowleyana HOM05D004704 ORTHO05D005384 1.0e-129 466.8 260 100.0
SalBow8G1161 Salvia bowleyana HOM05D004704 ORTHO05D005384 6.9e-81 304.7 169 99.4
Oeu012062.1 Olea europaea HOM05D004704 ORTHO05D005384 1.4e-62 243.8 179 74.3
Oeu062343.1 Olea europaea HOM05D004704 ORTHO05D005384 1.5e-59 233.8 177 78.5
Oeu041796.1 Olea europaea HOM05D004704 ORTHO05D005384 1.4e-57 227.3 177 71.8
Oeu041801.1 Olea europaea HOM05D004704 ORTHO05D005384 4.1e-57 225.7 177 70.1
Cc02_g14600 Coffea canephora HOM05D004704 ORTHO05D005384 1.2e-56 224.2 181 68.5
Migut.M01052 Erythranthe guttata HOM05D004704 ORTHO05D005384 2.0e-56 223.4 183 67.2
Lsat_1_v5_gn_7_23201 Lactuca sativa HOM05D004704 ORTHO05D005384 2.2e-55 219.9 176 67.6
SGA_v2.0_scaffold1G00026 Striga asiatica HOM05D004704 ORTHO05D005384 1.6e-53 213.8 182 63.7
SGA_v2.0_scaffold1G00019 Striga asiatica HOM05D004704 ORTHO05D005384 2.7e-53 213.0 182 63.2
Potri.004G054500 Populus trichocarpa HOM05D004704 ORTHO05D005384 3.6e-53 212.6 172 69.2
PGR004G2343 Punica granatum HOM05D004704 ORTHO05D005384 3.0e-52 209.5 176 66.5
Sabra11G0046100 Salix brachista HOM05D004704 ORTHO05D005384 3.0e-52 209.5 169 68.6
PGR004G2271 Punica granatum HOM05D004704 ORTHO05D005384 5.2e-52 208.8 178 65.2
DCAR_028021 Daucus carota HOM05D004704 ORTHO05D005384 6.7e-52 208.4 171 64.9
Potri.011G064300 Populus trichocarpa HOM05D004704 ORTHO05D005384 6.7e-52 208.4 169 68.6
QL04p061454 Quercus lobata HOM05D004704 ORTHO05D005384 8.8e-52 208.0 178 64.6
Sabra04G0035600 Salix brachista HOM05D004704 ORTHO05D005384 8.8e-52 208.0 171 69.0
CiPaw.09G067800 Carya illinoinensis HOM05D004704 ORTHO05D005384 1.1e-51 207.6 174 63.8
GSVIVG01021187001 Vitis vinifera HOM05D004704 ORTHO05D005384 1.5e-51 207.2 172 67.4
Solyc03g006230.1 Solanum lycopersicum HOM05D004704 ORTHO05D005384 7.4e-51 204.9 180 62.8
CSS0042475 Camellia sinensis var. sinensis HOM05D004704 ORTHO05D005384 1.7e-50 203.8 176 64.2
Nitab4.5_0002076g0080 Nicotiana tabacum HOM05D004704 ORTHO05D005384 1.7e-50 203.8 182 63.7
COL.COLO4_31331 Corchorus olitorius HOM05D004704 ORTHO05D005384 2.8e-50 203.0 177 66.7
HanXRQChr04g0115831 Helianthus annuus HOM05D004704 ORTHO05D005384 3.7e-50 202.6 179 62.0
Gohir.D06G134300 Gossypium hirsutum HOM05D004704 ORTHO05D005384 4.8e-50 202.2 178 65.7
Cfa000584 Carpinus fangiana HOM05D004704 ORTHO05D005384 1.1e-49 201.1 169 65.7
Gorai.010G156000 Gossypium raimondii HOM05D004704 ORTHO05D005384 1.1e-49 201.1 178 65.2
Thecc.06G174000 Theobroma cacao HOM05D004704 ORTHO05D005384 1.1e-49 201.1 175 65.1
TWI38G0698 Tripterygium wilfordii HOM05D004704 ORTHO05D005384 1.1e-49 201.1 173 64.7
PGSC0003DMG400018011 Solanum tuberosum HOM05D004704 ORTHO05D005384 1.4e-49 200.7 183 62.3
ECA236G1293 Erigeron canadensis HOM05D004704 ORTHO05D005384 3.1e-49 199.5 176 64.2
Nitab4.5_0001375g0020 Nicotiana tabacum HOM05D004704 ORTHO05D005384 3.1e-49 199.5 186 65.1
Manes.17G053900 Manihot esculenta HOM05D004704 ORTHO05D005384 4.1e-49 199.1 174 63.8
Duzib192G0914 Durio zibethinus HOM05D004704 ORTHO05D005384 9.1e-49 198.0 174 63.8
MBI06_g18005_MAGBIO Magnolia biondii HOM05D004704 ORTHO05D005384 9.1e-49 198.0 176 64.2
MBI06_g18007_MAGBIO Magnolia biondii HOM05D004704 ORTHO05D005384 1.2e-48 197.6 175 61.7
Nn1g04361 Nelumbo nucifera HOM05D004704 ORTHO05D005384 1.2e-48 197.6 178 64.0
PGSC0003DMG400004386 Solanum tuberosum HOM05D004704 ORTHO05D005384 1.2e-48 197.6 180 62.2
Aqoxy1G03204 Aquilegia oxysepala HOM05D004704 ORTHO05D005384 3.5e-48 196.1 175 60.6
Glyma.13G231200 Glycine max HOM05D004704 ORTHO05D005384 4.5e-48 195.7 187 59.9
Eucgr.D00532 Eucalyptus grandis HOM05D004704 ORTHO05D005384 5.9e-48 195.3 179 62.6
TAR627G0020 Trochodendron aralioides HOM05D004704 ORTHO05D005384 7.7e-48 194.9 173 59.5
TAR706G0003 Trochodendron aralioides HOM05D004704 ORTHO05D005384 7.7e-48 194.9 173 59.5
Peaxi162Scf00200g00121 Petunia axillaris HOM05D004704 ORTHO05D005384 1.0e-47 194.5 185 58.9
SGA_v2.0_scaffold1G00021 Striga asiatica HOM05D004704 ORTHO05D005384 1.3e-47 194.1 151 67.5
Duzib235G1356 Durio zibethinus HOM05D004704 ORTHO05D005384 3.8e-47 192.6 177 64.4
Dinv04632 Davidia involucrata HOM05D004704 ORTHO05D005384 6.5e-47 191.8 114 84.2
Eucgr.D00531 Eucalyptus grandis HOM05D004704 ORTHO05D005384 6.5e-47 191.8 173 61.8
DCAR_004019 Daucus carota HOM05D004704 ORTHO05D005384 8.5e-47 191.4 175 62.3
TAR629G2327 Trochodendron aralioides HOM05D004704 ORTHO05D005384 8.5e-47 191.4 169 58.0
TAR629G2609 Trochodendron aralioides HOM05D004704 ORTHO05D005384 8.5e-47 191.4 169 58.0
Zm00001eb161990 Zea mays HOM05D004704 ORTHO05D005384 1.1e-46 191.0 182 58.2
MELO3C007223.2 Cucumis melo HOM05D004704 ORTHO05D005384 1.5e-46 190.7 169 62.7
CiPaw.09G067900 Carya illinoinensis HOM05D004704 ORTHO05D005384 1.9e-46 190.3 173 61.3
BraA03t14222Z Brassica rapa HOM05D004704 ORTHO05D005384 4.2e-46 189.1 191 57.1
CsaV3_6G050770 Cucumis sativus L. HOM05D004704 ORTHO05D005384 9.4e-46 188.0 169 61.5
unitig_578.g16444 Utricularia gibba HOM05D004704 ORTHO05D005384 9.4e-46 188.0 178 60.7
TAR627G0576 Trochodendron aralioides HOM05D004704 ORTHO05D005384 2.7e-45 186.4 169 59.2
BcaC09g51492 Brassica carinata HOM05D004704 ORTHO05D005384 3.6e-45 186.0 177 58.2
DCAR_004020 Daucus carota HOM05D004704 ORTHO05D005384 3.6e-45 186.0 171 60.2
ClCG01G023620 Citrullus lanatus HOM05D004704 ORTHO05D005384 4.7e-45 185.7 170 60.0
Carub.0007s2269 Capsella rubella HOM05D004704 ORTHO05D005384 8.0e-45 184.9 194 55.7
A03p51400 Brassica napus HOM05D004704 ORTHO05D005384 1.4e-44 184.1 193 56.0
QL05p046090 Quercus lobata HOM05D004704 ORTHO05D005384 1.4e-44 184.1 174 59.2
Sed0013784 Sechium edule HOM05D004704 ORTHO05D005384 2.3e-44 183.3 172 57.6
Lj1P1195T10 Lonicera japonica HOM05D004704 ORTHO05D005384 3.0e-44 183.0 115 80.9
CAN.G2115.3 Capsicum annuum HOM05D004704 ORTHO05D005384 4.0e-44 182.6 182 58.2
arahy.Tifrunner.gnm1.ann1.7UF87C Arachis hypogaea HOM05D004704 ORTHO05D005384 6.7e-44 181.8 179 58.1
BcaC06g30574 Brassica carinata HOM05D004704 ORTHO05D005384 6.7e-44 181.8 193 54.9
PSO063G2883 Papaver somniferum HOM05D004704 ORTHO05D005384 1.2e-43 181.0 188 53.7
BcaNung02719 Brassica carinata HOM05D004704 ORTHO05D005384 1.5e-43 180.6 193 54.9
C07p49820 Brassica napus HOM05D004704 ORTHO05D005384 1.5e-43 180.6 193 54.9
BolC7t45484H Brassica oleracea HOM05D004704 ORTHO05D005384 1.5e-43 180.6 193 54.9
Thhalv10024794m.g Eutrema salsugineum HOM05D004704 ORTHO05D005384 2.0e-43 180.3 191 55.0
Sp7g15490 Schrenkiella parvula HOM05D004704 ORTHO05D005384 2.0e-43 180.3 194 56.2
PSO063G6793 Papaver somniferum HOM05D004704 ORTHO05D005384 4.4e-43 179.1 172 56.4
QL05p045074 Quercus lobata HOM05D004704 ORTHO05D005384 7.5e-43 178.3 174 59.2
arahy.Tifrunner.gnm1.ann1.IMTX5S Arachis hypogaea HOM05D004704 ORTHO05D005384 9.7e-43 177.9 173 58.4
PSO782G0987 Papaver somniferum HOM05D004704 ORTHO05D005384 9.7e-43 177.9 188 53.2
Manes.17G053800 Manihot esculenta HOM05D004704 ORTHO05D005384 2.2e-42 176.8 191 53.9
Aqoxy4G00468 Aquilegia oxysepala HOM05D004704 ORTHO05D005384 3.7e-42 176.0 170 56.5
Aa31LG6G1280 Aethionema arabicum HOM05D004704 ORTHO05D005384 4.8e-42 175.6 186 60.2
AL7G35740 Arabidopsis lyrata HOM05D004704 ORTHO05D005384 6.3e-42 175.3 191 55.0
PSO782G0854 Papaver somniferum HOM05D004704 ORTHO05D005384 6.3e-42 175.3 188 53.7
Rhsim13G0186500 Rhododendron simsii HOM05D004704 ORTHO05D005384 2.4e-41 173.3 114 75.4
Lj1C1195T2 Lonicera japonica HOM05D004704 ORTHO05D005384 3.1e-41 172.9 179 58.7
A01p10560 Brassica napus HOM05D004704 ORTHO05D005384 4.1e-41 172.6 169 60.9
Rhsim13G0106100 Rhododendron simsii HOM05D004704 ORTHO05D005384 4.1e-41 172.6 183 56.8
AT4G18540 Arabidopsis thaliana HOM05D004704 ORTHO05D005384 9.1e-41 171.4 197 53.3
Lalb_Chr24g0400061 Lupinus albus HOM05D004704 ORTHO05D005384 9.1e-41 171.4 180 55.6
BcaNung03813 Brassica carinata HOM05D004704 ORTHO05D005384 1.2e-40 171.0 180 53.3
CARHR225390 Cardamine hirsuta HOM05D004704 ORTHO05D005384 1.6e-40 170.6 192 52.1
BraA01t01002Z Brassica rapa HOM05D004704 ORTHO05D005384 2.0e-40 170.2 169 60.9
Ca_01465_v3 Cicer arietinum L. HOM05D004704 ORTHO05D005384 2.0e-40 170.2 178 53.9
Glyma.12G209400 Glycine max HOM05D004704 ORTHO05D005384 2.0e-40 170.2 170 55.3
BraA08t33364Z Brassica rapa HOM05D004704 ORTHO05D005384 2.7e-40 169.9 190 54.2
ATR0602G038 Amborella trichopoda HOM05D004704 ORTHO05D005384 3.5e-40 169.5 173 50.9
Lalb_Chr20g0121271 Lupinus albus HOM05D004704 ORTHO05D005384 3.5e-40 169.5 120 70.8
BcaC09g51493 Brassica carinata HOM05D004704 ORTHO05D005384 5.9e-40 168.7 172 59.3
BolC1t01223H Brassica oleracea HOM05D004704 ORTHO05D005384 5.9e-40 168.7 172 59.3
C01p12500 Brassica napus HOM05D004704 ORTHO05D005384 1.0e-39 167.9 169 60.4
C03p81280 Brassica napus HOM05D004704 ORTHO05D005384 1.3e-39 167.5 191 51.8
A08p13850 Brassica napus HOM05D004704 ORTHO05D005384 2.2e-39 166.8 191 51.3
Glyma.13G291900 Glycine max HOM05D004704 ORTHO05D005384 2.2e-39 166.8 170 55.3
CSS0042208 Camellia sinensis var. sinensis HOM05D004704 ORTHO05D005384 3.8e-39 166.0 193 52.3
Thhalv10023013m.g Eutrema salsugineum HOM05D004704 ORTHO05D005384 3.8e-39 166.0 169 54.4
Rhsim13G0106000 Rhododendron simsii HOM05D004704 ORTHO05D005384 3.8e-39 166.0 200 50.0
VMungo1080G1587 Vigna mungo HOM05D004704 ORTHO05D005384 6.5e-39 165.2 179 53.6
Lj3g0017096 Lotus japonicus HOM05D004704 ORTHO05D005384 1.1e-38 164.5 174 55.7
Lalb_Chr14g0367381 Lupinus albus HOM05D004704 ORTHO05D005384 3.2e-38 162.9 175 54.9
Os01g0613100 Oryza sativa ssp. japonica HOM05D004704 ORTHO05D005384 4.2e-38 162.5 181 54.7
Phvul.005G096400 Phaseolus vulgaris HOM05D004704 ORTHO05D005384 4.2e-38 162.5 179 51.4
Sabra11G0046000 Salix brachista HOM05D004704 ORTHO05D005384 5.5e-38 162.2 143 65.7
Medtr2g091155 Medicago truncatula HOM05D004704 ORTHO05D005384 1.6e-37 160.6 174 53.4
BcaB04g18480 Brassica carinata HOM05D004704 ORTHO05D005384 2.7e-37 159.8 189 52.4
Psat5g275720 Pisum sativum HOM05D004704 ORTHO05D005384 1.0e-36 157.9 171 51.5
Aqoxy4G00469 Aquilegia oxysepala HOM05D004704 ORTHO05D005384 2.3e-36 156.8 152 55.3
Medtr2g091165 Medicago truncatula HOM05D004704 ORTHO05D005384 4.4e-35 152.5 170 49.4
DCAR_013058 Daucus carota HOM05D004704 ORTHO05D005384 7.5e-35 151.8 177 52.0
TAR627G1005 Trochodendron aralioides HOM05D004704 ORTHO05D005384 2.1e-29 133.7 137 55.5
MBI06_g45390_MAGBIO Magnolia biondii HOM05D004704 ORTHO05D005384 2.3e-28 130.2 96 68.8
BcaC01g00546 Brassica carinata HOM05D004704 ORTHO05D005384 9.8e-27 124.8 193 44.0
BcaNung03810 Brassica carinata HOM05D004704 ORTHO05D005384 3.7e-26 122.9 84 70.2
Pp3c12_12860 Physcomitrium patens HOM05D004704 ORTHO05D005384 1.8e-25 120.6 134 45.5
Pp3c12_12910 Physcomitrium patens HOM05D004704 ORTHO05D005384 1.8e-25 120.6 134 45.5
GSVIVG01021186001 Vitis vinifera HOM05D004704 ORTHO05D000303 2.4e-25 120.2 131 57.3
CDE02G3156 Ceratophyllum demersum HOM05D004704 ORTHO05D005384 8.6e-23 111.7 170 39.4
BolC3t20394H Brassica oleracea HOM05D004704 ORTHO05D005384 9.8e-19 98.2 67 68.7
SEGI_01061 Sequoiadendron giganteum HOM05D004704 ORTHO05D005384 3.2e-17 93.2 137 45.3
SEGI_17553 Sequoiadendron giganteum HOM05D004704 ORTHO05D005384 1.9e-14 84.0 116 46.6
Solyc02g032600.1 Solanum lycopersicum HOM05D004704 ORTHO05D005384 1.6e-13 80.9 52 69.2
Sopen03g002240 Solanum pennellii HOM05D004704 ORTHO05D005384 1.1e-09 68.2 37 75.7
Rhsim13G0105800 Rhododendron simsii HOM05D004704 ORTHO05D005384 5.4e-09 65.9 46 65.2
TPR.G11553 Trifolium pratense HOM05D004704 ORTHO05D005384 6.0e-08 62.4 41 63.4


User provided reference genes

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