Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow2G1161 Salvia bowleyana HOM05D001921 ORTHO05D001784 9.0e-87 323.9 212 100.0
SGA_v2.0_scaffold142G35647 Striga asiatica HOM05D001921 ORTHO05D001784 1.0e-42 177.6 218 52.3
SGA_v2.0_scaffold57G20294 Striga asiatica HOM05D001921 ORTHO05D001784 6.7e-42 174.9 217 52.5
Migut.G00240 Erythranthe guttata HOM05D001921 ORTHO05D001784 2.2e-37 159.8 216 45.4
MSTRG.3970 Avicennia marina HOM05D001921 ORTHO05D001784 1.6e-30 137.1 216 61.1
Oeu032694.1 Olea europaea HOM05D001921 ORTHO05D001784 6.1e-27 125.2 215 43.3
Oeu022233.1 Olea europaea HOM05D001921 ORTHO05D001784 1.8e-26 123.6 221 38.9
Actinidia32376 Actinidia chinensis HOM05D001921 ORTHO05D001784 6.5e-21 105.1 125 58.4
CAN.G889.1 Capsicum annuum HOM05D001921 ORTHO05D001784 1.5e-20 104.0 129 51.2
SGA_v2.0_scaffold89G27578 Striga asiatica HOM05D001921 ORTHO05D001784 3.2e-20 102.8 213 41.3
Nitab4.5_0009936g0010 Nicotiana tabacum HOM05D001921 ORTHO05D001784 4.2e-20 102.4 211 37.9
Oeu037657.1 Olea europaea HOM05D001921 ORTHO05D001784 1.6e-19 100.5 220 36.4
Migut.N00134 Erythranthe guttata HOM05D001921 ORTHO05D001784 2.7e-19 99.8 212 37.3
Nitab4.5_0002295g0070 Nicotiana tabacum HOM05D001921 ORTHO05D001784 6.1e-19 98.6 212 37.3
PGSC0003DMG400032113 Solanum tuberosum HOM05D001921 ORTHO05D001784 8.0e-19 98.2 131 51.1
Haze_01021 Corylus avellana HOM05D001921 ORTHO05D001784 1.4e-18 97.4 221 38.0
Actinidia00069 Actinidia chinensis HOM05D001921 ORTHO05D001784 1.8e-18 97.1 213 38.0
Nitab4.5_0003070g0060 Nicotiana tabacum HOM05D001921 ORTHO05D001784 1.8e-18 97.1 120 51.7
Cfa015526 Carpinus fangiana HOM05D001921 ORTHO05D001784 2.3e-18 96.7 222 37.8
Sopen01g032320 Solanum pennellii HOM05D001921 ORTHO05D001784 2.3e-18 96.7 130 51.5
Hma1.2p1_0643F.1_g194540 Hydrangea macrophylla HOM05D001921 ORTHO05D001784 3.0e-18 96.3 225 40.4
Nitab4.5_0000059g0260 Nicotiana tabacum HOM05D001921 ORTHO05D001784 5.2e-18 95.5 120 51.7
Solyc01g080500.2 Solanum lycopersicum HOM05D001921 ORTHO05D001784 8.8e-18 94.7 131 50.4
QL06p006408 Quercus lobata HOM05D001921 ORTHO05D001784 1.2e-17 94.4 224 37.5
PGSC0003DMG400030765 Solanum tuberosum HOM05D001921 ORTHO05D001784 3.4e-17 92.8 215 37.7
Hma1.2p1_0511F.1_g169240 Hydrangea macrophylla HOM05D001921 ORTHO05D001784 4.4e-17 92.4 215 35.3
unitig_748.g8567 Utricularia gibba HOM05D001921 ORTHO05D001784 5.7e-17 92.0 120 48.3
ClCG06G005610 Citrullus lanatus HOM05D001921 ORTHO05D001784 2.8e-16 89.7 218 36.7
Rhsim02G0016000 Rhododendron simsii HOM05D001921 ORTHO05D001784 2.8e-16 89.7 226 36.7
MELO3C021383.2 Cucumis melo HOM05D001921 ORTHO05D001784 3.7e-16 89.4 219 36.5
Solyc06g054470.1 Solanum lycopersicum HOM05D001921 ORTHO05D001784 3.7e-16 89.4 215 36.7
CsaV3_6G005540 Cucumis sativus L. HOM05D001921 ORTHO05D001784 4.9e-16 89.0 219 36.5
Manes.15G019800 Manihot esculenta HOM05D001921 ORTHO05D001784 6.3e-16 88.6 127 51.2
Gorai.011G182400 Gossypium raimondii HOM05D001921 ORTHO05D001784 1.8e-15 87.0 222 34.7
Sopen06g019540 Solanum pennellii HOM05D001921 ORTHO05D001784 1.8e-15 87.0 215 36.7
Gohir.D10G163601 Gossypium hirsutum HOM05D001921 ORTHO05D001784 2.4e-15 86.7 222 34.7
Gohir.A09G060900 Gossypium hirsutum HOM05D001921 ORTHO05D001784 4.1e-15 85.9 220 35.5
unitig_32.g11745 Utricularia gibba HOM05D001921 ORTHO05D001784 4.1e-15 85.9 119 47.1
CANSAT78G1722 Cannabis sativa HOM05D001921 ORTHO05D001784 5.4e-15 85.5 227 35.7
DCAR_002429 Daucus carota HOM05D001921 ORTHO05D001784 7.0e-15 85.1 120 50.8
Duzib151G0850 Durio zibethinus HOM05D001921 ORTHO05D001784 7.0e-15 85.1 216 36.6
Gohir.A10G105100 Gossypium hirsutum HOM05D001921 ORTHO05D001784 7.0e-15 85.1 122 47.5
Phvul.006G158900 Phaseolus vulgaris HOM05D001921 ORTHO05D001784 7.0e-15 85.1 215 35.8
DCAR_023282 Daucus carota HOM05D001921 ORTHO05D001784 9.2e-15 84.7 123 48.8
TAR362G1200 Trochodendron aralioides HOM05D001921 ORTHO05D001784 9.2e-15 84.7 222 35.6
Aqoxy2G03179 Aquilegia oxysepala HOM05D001921 ORTHO05D001784 1.2e-14 84.3 232 38.4
arahy.Tifrunner.gnm1.ann1.288BMH Arachis hypogaea HOM05D001921 ORTHO05D001784 1.2e-14 84.3 221 35.7
arahy.Tifrunner.gnm1.ann1.XA6I97 Arachis hypogaea HOM05D001921 ORTHO05D001784 1.2e-14 84.3 221 35.3
Glyma.13G212500 Glycine max HOM05D001921 ORTHO05D001784 1.2e-14 84.3 215 35.3
Lj6g0003156 Lotus japonicus HOM05D001921 ORTHO05D001784 1.2e-14 84.3 123 49.6
Lj6g0019677 Lotus japonicus HOM05D001921 ORTHO05D001784 1.2e-14 84.3 123 49.6
SalBow5G1185 Salvia bowleyana HOM05D001921 ORTHO05D001784 1.2e-14 84.3 213 34.3
SalBow5G3126 Salvia bowleyana HOM05D001921 ORTHO05D001784 1.2e-14 84.3 213 34.3
TAR365G0872 Trochodendron aralioides HOM05D001921 ORTHO05D001784 1.2e-14 84.3 221 34.4
Sed0022941 Sechium edule HOM05D001921 ORTHO05D001784 2.0e-14 83.6 214 34.1
Thecc.04G273300 Theobroma cacao HOM05D001921 ORTHO05D001784 2.0e-14 83.6 124 47.6
Duzib212G0985 Durio zibethinus HOM05D001921 ORTHO05D001784 2.7e-14 83.2 127 48.8
Prupe.1G145900 Prunus persica HOM05D001921 ORTHO05D001784 2.7e-14 83.2 220 35.9
CAN.G256.2 Capsicum annuum HOM05D001921 ORTHO05D001784 3.5e-14 82.8 222 35.1
TAR636G3386 Trochodendron aralioides HOM05D001921 ORTHO05D001784 3.5e-14 82.8 220 33.6
VMungo0540G1436 Vigna mungo HOM05D001921 ORTHO05D001784 3.5e-14 82.8 215 37.2
Cpa.g.sc16.79 Carica papaya HOM05D001921 ORTHO05D001784 5.9e-14 82.0 217 34.6
Gohir.D09G059900 Gossypium hirsutum HOM05D001921 ORTHO05D001784 5.9e-14 82.0 124 47.6
Gorai.006G074600 Gossypium raimondii HOM05D001921 ORTHO05D001784 5.9e-14 82.0 124 47.6
Sed0007577 Sechium edule HOM05D001921 ORTHO05D001784 1.0e-13 81.3 218 34.4
CiPaw.02G088800 Carya illinoinensis HOM05D001921 ORTHO05D001784 1.3e-13 80.9 126 46.8
Potri.010G027500 Populus trichocarpa HOM05D001921 ORTHO05D001784 2.3e-13 80.1 227 33.9
Medtr2g020830 Medicago truncatula HOM05D001921 ORTHO05D001784 5.0e-13 79.0 213 34.7
Sabra08G0162400 Salix brachista HOM05D001921 ORTHO05D001784 5.0e-13 79.0 231 33.8
Manes.03G188600 Manihot esculenta HOM05D001921 ORTHO05D001784 6.6e-13 78.6 127 47.2
Ciclev10005894m.g Citrus clementina HOM05D001921 ORTHO05D001784 8.6e-13 78.2 219 48.9
FAN17G2860 Fragaria x ananassa HOM05D001921 ORTHO05D001784 2.5e-12 76.6 121 44.6
Nitab4.5_0002992g0090 Nicotiana tabacum HOM05D001921 ORTHO05D001784 3.3e-12 76.3 122 42.6
Nitab4.5_0009186g0010 Nicotiana tabacum HOM05D001921 ORTHO05D001784 3.3e-12 76.3 125 43.2
Sabra10G0013000 Salix brachista HOM05D001921 ORTHO05D001784 7.3e-12 75.1 217 34.1
FvH4_4g16740 Fragaria vesca HOM05D001921 ORTHO05D001784 1.6e-11 73.9 120 44.2
FAN12G2234 Fragaria x ananassa HOM05D001921 ORTHO05D001784 1.6e-11 73.9 120 44.2
FAN12G3386 Fragaria x ananassa HOM05D001921 ORTHO05D001784 1.6e-11 73.9 120 44.2
MBI18_g10965_MAGBIO Magnolia biondii HOM05D001921 ORTHO05D001784 1.6e-11 73.9 126 44.4
Dinv03521 Davidia involucrata HOM05D001921 ORTHO05D001784 3.6e-11 72.8 121 43.8
Peaxi162Scf00095g00034 Petunia axillaris HOM05D001921 ORTHO05D001784 3.6e-11 72.8 114 45.6
RcHm_v2.0_Chr4g0420321 Rosa chinensis HOM05D001921 ORTHO05D001784 4.7e-11 72.4 120 42.5
Ca_00585_v3 Cicer arietinum L. HOM05D001921 ORTHO05D001784 6.1e-11 72.0 216 32.4
FAN22G2319 Fragaria x ananassa HOM05D001921 ORTHO05D001784 6.1e-11 72.0 86 53.5
Peaxi162Scf00769g00001 Petunia axillaris HOM05D001921 ORTHO05D001784 6.1e-11 72.0 212 34.4
Potri.008G198000 Populus trichocarpa HOM05D001921 ORTHO05D001784 6.1e-11 72.0 135 41.5
Glyma.15G100300 Glycine max HOM05D001921 ORTHO05D001784 8.0e-11 71.6 215 34.4
Ciclev10009542m.g Citrus clementina HOM05D001921 ORTHO05D001784 1.0e-10 71.2 133 40.6
PGR031G1199 Punica granatum HOM05D001921 ORTHO05D001784 1.4e-10 70.9 124 44.4
CiPaw.01G156200 Carya illinoinensis HOM05D001921 ORTHO05D001784 1.8e-10 70.5 127 42.5
FAN07G0769 Fragaria x ananassa HOM05D001921 ORTHO05D001784 1.8e-10 70.5 121 43.0
TAR383G0606 Trochodendron aralioides HOM05D001921 ORTHO05D001784 1.8e-10 70.5 121 41.3
Oeu012641.1 Olea europaea HOM05D001921 ORTHO05D001784 3.0e-10 69.7 123 43.1
Psat1g185920 Pisum sativum HOM05D001921 ORTHO05D001784 4.0e-10 69.3 121 43.8
Nn2g12262 Nelumbo nucifera HOM05D001921 ORTHO05D001784 5.2e-10 68.9 123 43.1
ATR0580G129 Amborella trichopoda HOM05D001921 ORTHO05D001784 8.9e-10 68.2 132 45.5
Aqoxy5G00575 Aquilegia oxysepala HOM05D001921 ORTHO05D001784 8.9e-10 68.2 212 29.2
Dinv42904 Davidia involucrata HOM05D001921 ORTHO05D001784 2.6e-09 66.6 124 44.4
Dinv43197 Davidia involucrata HOM05D001921 ORTHO05D001784 2.6e-09 66.6 124 44.4
Nitab4.5_0001906g0010 Nicotiana tabacum HOM05D001921 ORTHO05D001784 2.6e-09 66.6 120 42.5
TWI63G1839 Tripterygium wilfordii HOM05D001921 ORTHO05D001784 2.6e-09 66.6 126 42.1
Atru.chr7.2506 Acer truncatum HOM05D001921 ORTHO05D001784 4.4e-09 65.9 138 39.1
Dinv03420 Davidia involucrata HOM05D001921 ORTHO05D001784 4.4e-09 65.9 98 48.0
Glyma.17G021000 Glycine max HOM05D001921 ORTHO05D001784 4.4e-09 65.9 86 50.0
Lj4g0019196 Lotus japonicus HOM05D001921 ORTHO05D001784 4.4e-09 65.9 91 46.2
CAN.G1045.40 Capsicum annuum HOM05D001921 ORTHO05D001784 7.5e-09 65.1 122 37.7
Hma1.2p1_0028F.1_g017215 Hydrangea macrophylla HOM05D001921 ORTHO05D001784 9.8e-09 64.7 121 43.0
Manes.16G126400 Manihot esculenta HOM05D001921 ORTHO05D001784 9.8e-09 64.7 123 40.7
QL02p091546 Quercus lobata HOM05D001921 ORTHO05D001784 9.8e-09 64.7 128 40.6
DCAR_027127 Daucus carota HOM05D001921 ORTHO05D001784 1.3e-08 64.3 64 59.4
Eucgr.H03650 Eucalyptus grandis HOM05D001921 ORTHO05D001784 1.3e-08 64.3 77 54.5
MD15G1158100 Malus domestica HOM05D001921 ORTHO05D001784 1.3e-08 64.3 125 44.0
Atru.chr4.2710 Acer truncatum HOM05D001921 ORTHO05D001784 1.7e-08 63.9 222 29.3
DCAR_030578 Daucus carota HOM05D001921 ORTHO05D001784 1.7e-08 63.9 214 32.2
Dinv41418 Davidia involucrata HOM05D001921 ORTHO05D001784 1.7e-08 63.9 124 42.7
HPP92_001333 Vanilla planifolia HOM05D001921 ORTHO05D001784 1.7e-08 63.9 119 39.5
Glyma.07G253400 Glycine max HOM05D001921 ORTHO05D001784 2.2e-08 63.5 94 47.9
PGR004G0777 Punica granatum HOM05D001921 ORTHO05D001784 2.2e-08 63.5 119 41.2
Hma1.2p1_2976F.1_g331170 Hydrangea macrophylla HOM05D001921 ORTHO05D001784 2.9e-08 63.2 121 43.0
Cfa020875 Carpinus fangiana HOM05D001921 ORTHO05D001784 3.7e-08 62.8 123 40.7
MBI19_g25275_MAGBIO Magnolia biondii HOM05D001921 ORTHO05D001784 3.7e-08 62.8 52 63.5
Lalb_Chr18g0055871 Lupinus albus HOM05D001921 ORTHO05D001784 4.9e-08 62.4 122 42.6
Prupe.7G253300 Prunus persica HOM05D001921 ORTHO05D001784 4.9e-08 62.4 127 43.3
Rhsim03G0253600 Rhododendron simsii HOM05D001921 ORTHO05D001784 4.9e-08 62.4 120 43.3
Thecc.09G018900 Theobroma cacao HOM05D001921 ORTHO05D001784 4.9e-08 62.4 127 39.4
CAN.G142.1 Capsicum annuum HOM05D001921 ORTHO05D001784 6.4e-08 62.0 128 39.8
Manes.06G040800 Manihot esculenta HOM05D001921 ORTHO05D001784 8.3e-08 61.6 124 38.7
THA.LOC104820224 Tarenaya hassleriana HOM05D001921 ORTHO05D001784 8.3e-08 61.6 118 38.1
Cfa017851 Carpinus fangiana HOM05D001921 ORTHO05D001784 1.1e-07 61.2 72 58.3
Ca_21561_v3 Cicer arietinum L. HOM05D001921 ORTHO05D001784 1.1e-07 61.2 108 43.5
Actinidia23087 Actinidia chinensis HOM05D001921 ORTHO05D001784 1.4e-07 60.8 98 42.9
Psat4g028640 Pisum sativum HOM05D001921 ORTHO05D001784 1.8e-07 60.5 52 65.4
COL.COLO4_18922 Corchorus olitorius HOM05D001921 ORTHO05D001784 2.4e-07 60.1 129 35.7
THA.LOC104804502 Tarenaya hassleriana HOM05D001921 ORTHO05D001784 2.4e-07 60.1 121 40.5
TPR.G18029 Trifolium pratense HOM05D001921 ORTHO05D001784 2.4e-07 60.1 120 40.8
TWI32G1277 Tripterygium wilfordii HOM05D001921 ORTHO05D001784 2.4e-07 60.1 120 38.3
Lalb_Chr15g0087151 Lupinus albus HOM05D001921 ORTHO05D001784 3.2e-07 59.7 121 43.0
RcHm_v2.0_Chr6g0297171 Rosa chinensis HOM05D014836 ORTHO05D001784 3.2e-07 59.7 122 39.3
Phvul.003G175500 Phaseolus vulgaris HOM05D001921 ORTHO05D001784 4.1e-07 59.3 122 40.2
Solyc08g041860.1 Solanum lycopersicum HOM05D001921 ORTHO05D001784 4.1e-07 59.3 122 36.1
HPP92_025281 Vanilla planifolia HOM05D001921 ORTHO05D001784 4.1e-07 59.3 122 41.0
VMungo1215G1281 Vigna mungo HOM05D001921 ORTHO05D001784 4.1e-07 59.3 94 44.7
Aqoxy7G03512 Aquilegia oxysepala HOM05D001921 ORTHO05D001784 7.0e-07 58.5 125 38.4
Haze_19306 Corylus avellana HOM05D001921 ORTHO05D001784 7.0e-07 58.5 123 37.4
Duzib187G0974 Durio zibethinus HOM05D001921 ORTHO05D001784 7.0e-07 58.5 129 39.5
Sc15g0003760 Simmondsia chinensis HOM05D001921 ORTHO05D001784 7.0e-07 58.5 52 65.4
MSTRG.24769 Avicennia marina HOM05D001921 ORTHO05D001784 9.2e-07 58.2 184 29.9
Sopen08g012070 Solanum pennellii HOM05D001921 ORTHO05D001784 9.2e-07 58.2 122 35.2
Cfa010136 Carpinus fangiana HOM05D001921 ORTHO05D001784 1.2e-06 57.8 72 55.6
Lsat_1_v5_gn_5_51861 Lactuca sativa HOM05D001921 ORTHO05D001784 1.2e-06 57.8 53 60.4
TPR.G15777 Trifolium pratense HOM05D001921 ORTHO05D001784 1.2e-06 57.8 123 40.7
VMungo1215G2840 Vigna mungo HOM05D001921 ORTHO05D001784 1.6e-06 57.4 122 39.3
AT3G21570 Arabidopsis thaliana HOM05D001921 ORTHO05D001784 2.0e-06 57.0 51 58.8
Gohir.A06G100200 Gossypium hirsutum HOM05D001921 ORTHO05D001784 2.0e-06 57.0 125 38.4
Psat4g034000 Pisum sativum HOM05D001921 ORTHO05D001784 2.7e-06 56.6 124 39.5
TPR.G28126 Trifolium pratense HOM05D001921 ORTHO05D001784 3.5e-06 56.2 50 60.0
Gohir.A07G030700 Gossypium hirsutum HOM05D001921 ORTHO05D001784 4.6e-06 55.8 126 39.7
Medtr4g118490 Medicago truncatula HOM05D001921 ORTHO05D001784 4.6e-06 55.8 53 64.2
Phvul.003G098700 Phaseolus vulgaris HOM05D001921 ORTHO05D001784 4.6e-06 55.8 98 43.9
Gohir.D06G102300 Gossypium hirsutum HOM05D001921 ORTHO05D001784 5.9e-06 55.5 128 37.5
Gorai.010G117300 Gossypium raimondii HOM05D001921 ORTHO05D001784 5.9e-06 55.5 128 37.5
ECA240G2556 Erigeron canadensis HOM05D001921 ORTHO05D001784 7.8e-06 55.1 63 52.4
MD03G1009700 Malus domestica HOM05D001921 ORTHO05D001784 7.8e-06 55.1 111 42.3


User provided reference genes

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