Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow2G1018 Salvia bowleyana HOM05D005177 ORTHO05D006175 1.2e-197 693.0 357 100.0
SalBow7G3352 Salvia bowleyana HOM05D005177 ORTHO05D006175 1.1e-126 457.2 219 99.5
SalBow8G4533 Salvia bowleyana HOM05D005177 ORTHO05D006175 1.8e-111 406.8 221 96.8
SGA_v2.0_scaffold97G29176 Striga asiatica HOM05D005177 ORTHO05D006175 1.4e-31 141.4 82 78.0
Migut.D02184 Erythranthe guttata HOM05D005177 ORTHO05D006175 2.4e-31 140.6 108 63.0
MD03G1105200 Malus domestica HOM05D005177 ORTHO05D006175 4.0e-31 139.8 108 58.3
MSTRG.18639 Avicennia marina HOM05D005177 ORTHO05D006175 5.3e-31 139.4 108 61.1
MD12G1113200 Malus domestica HOM05D005177 ORTHO05D006175 9.9e-30 135.2 84 69.0
Prupe.6G094900 Prunus persica HOM05D005177 ORTHO05D006175 1.3e-29 134.8 108 59.3
MD03G1203800 Malus domestica HOM05D005177 ORTHO05D006175 6.4e-29 132.5 85 65.9
CSS0008980 Camellia sinensis var. sinensis HOM05D005177 ORTHO05D006175 1.1e-28 131.7 108 56.5
MD02G1279000 Malus domestica HOM05D005177 ORTHO05D006175 1.4e-28 131.3 84 66.7
Phvul.011G072700 Phaseolus vulgaris HOM05D005177 ORTHO05D006175 1.4e-28 131.3 108 56.5
GSVIVG01025137001 Vitis vinifera HOM05D005177 ORTHO05D006175 1.9e-28 131.0 108 55.6
PGR102G1116 Punica granatum HOM05D005177 ORTHO05D006175 4.2e-28 129.8 125 50.4
Dinv32787 Davidia involucrata HOM05D005177 ORTHO05D006175 7.1e-28 129.0 83 69.9
QL01p037260 Quercus lobata HOM05D005177 ORTHO05D006175 7.1e-28 129.0 108 56.5
TAR636G0661 Trochodendron aralioides HOM05D005177 ORTHO05D006175 9.3e-28 128.6 108 56.5
Peaxi162Scf00389g00939 Petunia axillaris HOM05D005177 ORTHO05D006175 1.6e-27 127.9 84 69.0
Oeu005908.1 Olea europaea HOM05D005177 ORTHO05D006175 2.7e-27 127.1 108 57.4
VMungo1127G2232 Vigna mungo HOM05D005177 ORTHO05D006175 2.7e-27 127.1 107 56.1
RcHm_v2.0_Chr5g0060611 Rosa chinensis HOM05D005177 ORTHO05D006175 3.5e-27 126.7 108 57.4
CiPaw.13G107600 Carya illinoinensis HOM05D005177 ORTHO05D006175 4.6e-27 126.3 108 52.8
Gohir.D02G184700 Gossypium hirsutum HOM05D005177 ORTHO05D006175 6.0e-27 125.9 83 66.3
Gorai.005G207000 Gossypium raimondii HOM05D005177 ORTHO05D006175 6.0e-27 125.9 83 66.3
Lalb_Chr01g0004161 Lupinus albus HOM05D005177 ORTHO05D006175 6.0e-27 125.9 108 56.5
Thecc.09G260100 Theobroma cacao HOM05D005177 ORTHO05D006175 1.0e-26 125.2 108 53.7
Lj2C1035T4 Lonicera japonica HOM05D005177 ORTHO05D006175 1.3e-26 124.8 131 51.9
Nn2g10682 Nelumbo nucifera HOM05D005177 ORTHO05D006175 1.3e-26 124.8 83 65.1
Rhsim01G0220100 Rhododendron simsii HOM05D005177 ORTHO05D006175 1.3e-26 124.8 108 55.6
unitig_899.g14907 Utricularia gibba HOM05D005177 ORTHO05D006175 1.3e-26 124.8 118 51.7
Cfa011363 Carpinus fangiana HOM05D005177 ORTHO05D006175 3.0e-26 123.6 108 51.9
Cc01_g11530 Coffea canephora HOM05D005177 ORTHO05D006175 3.0e-26 123.6 108 52.8
Glyma.11G153378 Glycine max HOM05D005177 ORTHO05D006175 3.0e-26 123.6 107 54.2
TWI79G0119 Tripterygium wilfordii HOM05D005177 ORTHO05D006175 3.0e-26 123.6 107 53.3
CAN.G553.3 Capsicum annuum HOM05D005177 ORTHO05D006175 5.1e-26 122.9 108 54.6
FAN21G0634 Fragaria x ananassa HOM05D005177 ORTHO05D006175 1.1e-25 121.7 140 46.4
Nitab4.5_0002129g0070 Nicotiana tabacum HOM05D005177 ORTHO05D006175 1.1e-25 121.7 108 56.5
vmacro14462 Vaccinium macrocarpon HOM05D005177 ORTHO05D006175 1.9e-25 120.9 108 52.8
PGSC0003DMG400027405 Solanum tuberosum HOM05D005177 ORTHO05D006175 2.5e-25 120.6 108 55.6
Ca_19242_v3 Cicer arietinum L. HOM05D005177 ORTHO05D006175 3.3e-25 120.2 108 52.8
Lj3g0021588 Lotus japonicus HOM05D005177 ORTHO05D006175 3.3e-25 120.2 108 51.9
Lj3g0023073 Lotus japonicus HOM05D005177 ORTHO05D006175 3.3e-25 120.2 83 61.4
Actinidia03746 Actinidia chinensis HOM05D005177 ORTHO05D006175 4.3e-25 119.8 108 51.9
SalBow3G0366 Salvia bowleyana HOM05D055714 ORTHO05D006175 4.3e-25 119.8 62 90.3
SalBow5G0806 Salvia bowleyana HOM05D055714 ORTHO05D006175 4.3e-25 119.8 62 90.3
TPR.G14917 Trifolium pratense HOM05D005177 ORTHO05D006175 4.3e-25 119.8 108 52.8
Lalb_Chr03g0027121 Lupinus albus HOM05D005177 ORTHO05D006175 5.6e-25 119.4 108 55.6
arahy.Tifrunner.gnm1.ann1.Q9R44R Arachis hypogaea HOM05D005177 ORTHO05D006175 1.3e-24 118.2 82 64.6
Sc06g0010530 Simmondsia chinensis HOM05D005177 ORTHO05D006175 1.3e-24 118.2 108 50.9
Solyc11g072400.3 Solanum lycopersicum HOM05D005177 ORTHO05D006175 1.3e-24 118.2 108 54.6
CANSAT54G2759 Cannabis sativa HOM05D005177 ORTHO05D006175 1.6e-24 117.9 95 58.9
COL.COLO4_25245 Corchorus olitorius HOM05D005177 ORTHO05D006175 1.6e-24 117.9 83 60.2
Sopen11g030050 Solanum pennellii HOM05D005177 ORTHO05D006175 1.6e-24 117.9 108 54.6
Medtr4g060790 Medicago truncatula HOM05D005177 ORTHO05D006175 2.1e-24 117.5 107 52.3
RcHm_v2.0_Chr5g0060621 Rosa chinensis HOM05D005177 ORTHO05D006175 2.1e-24 117.5 83 63.9
arahy.Tifrunner.gnm1.ann1.X56S8K Arachis hypogaea HOM05D005177 ORTHO05D006175 2.8e-24 117.1 82 63.4
DCAR_006046 Daucus carota HOM05D005177 ORTHO05D006175 2.8e-24 117.1 108 47.2
Psat0s137g0200 Pisum sativum HOM05D005177 ORTHO05D006175 3.7e-24 116.7 107 52.3
CDE04G2914 Ceratophyllum demersum HOM05D005177 ORTHO05D006175 4.8e-24 116.3 119 48.7
Duzib168G0988 Durio zibethinus HOM05D005177 ORTHO05D006175 4.8e-24 116.3 83 61.4
FvH4_3g33260 Fragaria vesca HOM05D005177 ORTHO05D006175 1.1e-23 115.2 108 50.9
Manes.11G141500 Manihot esculenta HOM05D005177 ORTHO05D006175 1.8e-23 114.4 126 46.0
Hund08273 Selenicereus undatus HOM05D005177 ORTHO05D006175 1.8e-23 114.4 118 48.3
TWI31G0237 Tripterygium wilfordii HOM05D005177 ORTHO05D006175 4.0e-23 113.2 85 57.6
Atru.chr3.3689 Acer truncatum HOM05D005177 ORTHO05D006175 5.3e-23 112.8 108 51.9
Aqoxy4G03211 Aquilegia oxysepala HOM05D005177 ORTHO05D006175 5.3e-23 112.8 84 54.8
Cpa.g.sc139.70 Carica papaya HOM05D005177 ORTHO05D006175 5.3e-23 112.8 108 48.1
Ciclev10028554m.g Citrus clementina HOM05D005177 ORTHO05D006175 5.3e-23 112.8 108 48.1
Duzib170G1166 Durio zibethinus HOM05D005177 ORTHO05D006175 5.3e-23 112.8 148 41.9
AUR62025012 Chenopodium quinoa HOM05D005177 ORTHO05D006175 1.2e-22 111.7 84 58.3
PSO339G4756 Papaver somniferum HOM05D005177 ORTHO05D006175 2.0e-22 110.9 83 60.2
Eucgr.B02471 Eucalyptus grandis HOM05D005177 ORTHO05D006175 2.6e-22 110.5 108 46.3
Lalb_Chr06g0165641 Lupinus albus HOM05D005177 ORTHO05D006175 2.6e-22 110.5 83 59.0
PSO063G2407 Papaver somniferum HOM05D005177 ORTHO05D006175 7.6e-22 109.0 93 54.8
Ah.01g015010 Amaranthus hybridus HOM05D005177 ORTHO05D006175 1.3e-21 108.2 82 58.5
CiPaw.13G107200 Carya illinoinensis HOM05D005177 ORTHO05D006175 1.7e-21 107.8 117 46.2
QL01p037225 Quercus lobata HOM05D005177 ORTHO05D006175 2.9e-21 107.1 82 59.8
ECA238G1817 Erigeron canadensis HOM05D000382 ORTHO05D000391 3.8e-21 106.7 118 45.8
MD11G1130000 Malus domestica HOM05D005177 ORTHO05D006175 3.8e-21 106.7 83 60.2
Lj5g0027081 Lotus japonicus HOM05D005177 ORTHO05D006175 1.1e-20 105.1 108 46.3
Haze_23911 Corylus avellana HOM05D005177 ORTHO05D006175 1.4e-20 104.8 82 58.5
Haze_23912 Corylus avellana HOM05D005177 ORTHO05D006175 1.4e-20 104.8 82 58.5
TPR.G4931 Trifolium pratense HOM05D005177 ORTHO05D006175 1.4e-20 104.8 108 47.2
QL01p037240 Quercus lobata HOM05D005177 ORTHO05D006175 1.9e-20 104.4 102 50.0
Cfa011364 Carpinus fangiana HOM05D005177 ORTHO05D006175 2.5e-20 104.0 107 48.6
Lsat_1_v5_gn_2_50980 Lactuca sativa HOM05D005177 ORTHO05D006175 3.2e-20 103.6 108 46.3
Phvul.007G036300 Phaseolus vulgaris HOM05D005177 ORTHO05D006175 3.2e-20 103.6 108 47.2
Psat6g221840 Pisum sativum HOM05D005177 ORTHO05D006175 3.2e-20 103.6 108 46.3
Medtr1g062090 Medicago truncatula HOM05D005177 ORTHO05D006175 4.2e-20 103.2 108 46.3
Ca_11098_v3 Cicer arietinum L. HOM05D005177 ORTHO05D006175 5.5e-20 102.8 108 48.1
Thhalv10013696m.g Eutrema salsugineum HOM05D005177 ORTHO05D006175 9.3e-20 102.1 93 49.5
HanXRQChr14g0433031 Helianthus annuus HOM05D005177 ORTHO05D006175 1.2e-19 101.7 122 42.6
BraA02t05734Z Brassica rapa HOM05D005177 ORTHO05D006175 1.6e-19 101.3 86 48.8
ClCG02G020960 Citrullus lanatus HOM05D005177 ORTHO05D006175 1.6e-19 101.3 108 43.5
ATR1159G017 Amborella trichopoda HOM05D005177 ORTHO05D006175 2.1e-19 100.9 85 54.1
C02p11760 Brassica napus HOM05D005177 ORTHO05D006175 2.1e-19 100.9 82 51.2
MELO3C025749.2 Cucumis melo HOM05D005177 ORTHO05D006175 3.5e-19 100.1 108 44.4
Zm00001eb265420 Zea mays HOM05D005177 ORTHO05D006175 1.0e-18 98.6 83 53.0
Aa31LG1G12430 Aethionema arabicum HOM05D005177 ORTHO05D006175 1.3e-18 98.2 82 51.2
AL8G36980 Arabidopsis lyrata HOM05D005177 ORTHO05D006175 1.3e-18 98.2 95 46.3
CsaV3_6G021650 Cucumis sativus L. HOM05D005177 ORTHO05D006175 1.8e-18 97.8 107 43.0
Sp6g21970 Schrenkiella parvula HOM05D005177 ORTHO05D006175 1.8e-18 97.8 82 50.0
BcaB05g22637 Brassica carinata HOM05D000280 ORTHO05D000632 2.3e-18 97.4 82 50.0
BcaC03g13978 Brassica carinata HOM05D005177 ORTHO05D006175 2.3e-18 97.4 82 50.0
THA.LOC104814837 Tarenaya hassleriana HOM05D005177 ORTHO05D006175 2.3e-18 97.4 108 44.4
BolC2t07273H Brassica oleracea HOM05D005177 ORTHO05D006175 3.0e-18 97.1 82 50.0
Os05g0123300 Oryza sativa ssp. japonica HOM05D005177 ORTHO05D006175 3.0e-18 97.1 108 44.4
AT5G60370 Arabidopsis thaliana HOM05D005177 ORTHO05D006175 5.1e-18 96.3 95 45.3
SalBow8G2451 Salvia bowleyana HOM05D022886 ORTHO05D006175 5.1e-18 96.3 47 97.9
VMungo0251G1016 Vigna mungo HOM05D005177 ORTHO05D006175 5.1e-18 96.3 82 53.7
AUR62006522 Chenopodium quinoa HOM05D005177 ORTHO05D006175 1.9e-17 94.4 68 63.2
SEGI_09926 Sequoiadendron giganteum HOM05D005177 ORTHO05D006175 2.5e-17 94.0 85 44.7
PSO384G3506 Papaver somniferum HOM05D005177 ORTHO05D006175 4.3e-17 93.2 83 50.6
Carub.0008s2107 Capsella rubella HOM05D005177 ORTHO05D006175 5.7e-17 92.8 82 46.3
Haze_23910 Corylus avellana HOM05D005177 ORTHO05D006175 5.7e-17 92.8 57 66.7
Pp3c24_6040 Physcomitrium patens HOM05D005177 ORTHO05D006175 7.4e-17 92.4 84 46.4
PSO339G4079 Papaver somniferum HOM05D005177 ORTHO05D006175 2.2e-16 90.9 83 49.4
SalBow1G4476 Salvia bowleyana HOM05D022886 ORTHO05D006175 2.2e-16 90.9 47 93.6
SMO143G0224 Selaginella moellendorffii HOM05D005177 ORTHO05D006175 2.4e-15 87.4 84 45.2
CiPaw.13G107400 Carya illinoinensis HOM05D005177 ORTHO05D006175 4.1e-15 86.7 98 42.9
SHI06048 Sapria himalayana HOM05D005177 ORTHO05D006175 2.6e-14 84.0 120 39.2
CBR_g2921 Chara braunii HOM05D005177 ORTHO05D006175 3.4e-14 83.6 84 41.7
Mapoly0004s0234 Marchantia polymorpha HOM05D005177 ORTHO05D006175 1.3e-13 81.6 85 45.9
Sed0002828 Sechium edule HOM05D005177 ORTHO05D005441 1.1e-12 78.6 68 48.5
SalBow1G1898 Salvia bowleyana HOM05D022886 ORTHO05D006175 3.9e-10 70.1 41 82.9
Nitab4.5_0001802g0050 Nicotiana tabacum HOM05D005177 ORTHO05D006175 1.9e-09 67.8 69 50.7
EL10Ac9g22467 Beta vulgaris HOM05D005177 ORTHO05D006175 7.4e-09 65.9 84 40.5
Dinv01415 Davidia involucrata HOM05D005177 ORTHO05D006175 2.2e-08 64.3 35 80.0


User provided reference genes

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