Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow2G0899 Salvia bowleyana HOM05D001166 ORTHO05D000992 6.8e-125 450.7 226 100.0
Oeu064701.1 Olea europaea HOM05D001166 ORTHO05D000992 3.2e-10 69.7 39 87.2
Ca_01243_v3 Cicer arietinum L. HOM05D001166 ORTHO05D000992 2.7e-09 66.6 39 79.5
Oeu058213.1 Olea europaea HOM05D001166 ORTHO05D000992 2.7e-09 66.6 37 86.5
SGA_v2.0_scaffold95G28681 Striga asiatica HOM05D001166 ORTHO05D000992 2.7e-09 66.6 37 83.8
Cc01_g15780 Coffea canephora HOM05D001166 ORTHO05D000992 1.0e-08 64.7 39 76.9
arahy.Tifrunner.gnm1.ann1.WF9MFL Arachis hypogaea HOM05D001166 ORTHO05D000992 2.3e-08 63.5 39 76.9
arahy.Tifrunner.gnm1.ann1.X8XU5X Arachis hypogaea HOM05D001166 ORTHO05D000992 2.3e-08 63.5 39 76.9
BcaC01g04276 Brassica carinata HOM05D001166 ORTHO05D000992 2.3e-08 63.5 39 79.5
A03p35340 Brassica napus HOM05D001166 ORTHO05D000992 2.3e-08 63.5 39 79.5
C03p42950 Brassica napus HOM05D001166 ORTHO05D000992 2.3e-08 63.5 39 79.5
BolC3t16563H Brassica oleracea HOM05D001166 ORTHO05D000992 2.3e-08 63.5 39 79.5
BraA03t12712Z Brassica rapa HOM05D001166 ORTHO05D000992 2.3e-08 63.5 39 79.5
Glyma.13G346000 Glycine max HOM05D001166 ORTHO05D000992 4.0e-08 62.8 39 76.9
Phvul.005G154800 Phaseolus vulgaris HOM05D001166 ORTHO05D000992 4.0e-08 62.8 38 76.3
VMungo1080G0792 Vigna mungo HOM05D001166 ORTHO05D000992 4.0e-08 62.8 38 76.3
PGR142G2872 Punica granatum HOM05D001166 ORTHO05D000992 6.8e-08 62.0 39 74.4
Solyc09g020000.3 Solanum lycopersicum HOM05D001166 ORTHO05D000992 8.8e-08 61.6 40 80.0
Sopen09g012830 Solanum pennellii HOM05D001166 ORTHO05D000992 8.8e-08 61.6 40 80.0
Dinv44161 Davidia involucrata HOM05D001166 ORTHO05D000992 1.2e-07 61.2 39 71.8
Thhalv10021333m.g Eutrema salsugineum HOM05D001166 ORTHO05D000992 1.2e-07 61.2 39 76.9
SGA_v2.0_scaffold77G25325 Striga asiatica HOM05D001166 ORTHO05D000992 1.2e-07 61.2 37 75.7
Glyma.15G028300 Glycine max HOM05D001166 ORTHO05D000992 1.5e-07 60.8 39 74.4
Manes.04G047900 Manihot esculenta HOM05D001166 ORTHO05D000992 1.5e-07 60.8 37 73.0
Nitab4.5_0001348g0190 Nicotiana tabacum HOM05D001166 ORTHO05D000992 1.5e-07 60.8 36 77.8
Nitab4.5_0007648g0010 Nicotiana tabacum HOM05D001166 ORTHO05D000992 1.5e-07 60.8 40 77.5
Rhsim13G0055700 Rhododendron simsii HOM05D001166 ORTHO05D000992 1.5e-07 60.8 38 76.3
vmacro02846 Vaccinium macrocarpon HOM05D001166 ORTHO05D000992 1.5e-07 60.8 38 73.7
AT3G07565 Arabidopsis thaliana HOM05D001166 ORTHO05D000992 2.0e-07 60.5 39 76.9
BcaB04g21286 Brassica carinata HOM05D001166 ORTHO05D000992 2.0e-07 60.5 39 76.9
Lj1A106T20 Lonicera japonica HOM05D001166 ORTHO05D000992 2.0e-07 60.5 39 76.9
Actinidia11653 Actinidia chinensis HOM05D001166 ORTHO05D000992 2.6e-07 60.1 39 74.4
Cpa.g.sc8.21 Carica papaya HOM05D001166 ORTHO05D000992 2.6e-07 60.1 36 77.8
MBI07_g05953_MAGBIO Magnolia biondii HOM05D001166 ORTHO05D000992 2.6e-07 60.1 39 71.8
Sp3g06490 Schrenkiella parvula HOM05D001166 ORTHO05D000992 2.6e-07 60.1 39 74.4
Lsat_1_v5_gn_9_15841 Lactuca sativa HOM05D001166 ORTHO05D000992 3.4e-07 59.7 39 71.8
AL3G18910 Arabidopsis lyrata HOM05D001166 ORTHO05D000992 4.4e-07 59.3 39 74.4
BraA01t04375Z Brassica rapa HOM05D001166 ORTHO05D000992 4.4e-07 59.3 39 74.4
CSS0014252 Camellia sinensis var. sinensis HOM05D001166 ORTHO05D000992 4.4e-07 59.3 39 74.4
Dinv28778 Davidia involucrata HOM05D001166 ORTHO05D000992 4.4e-07 59.3 41 75.6
Aa31LG5G18110 Aethionema arabicum HOM05D001166 ORTHO05D000992 5.7e-07 58.9 39 71.8
A05p40640 Brassica napus HOM05D001166 ORTHO05D000992 5.7e-07 58.9 35 80.0
C05p59750 Brassica napus HOM05D001166 ORTHO05D000992 5.7e-07 58.9 35 80.0
BolC5t34629H Brassica oleracea HOM05D001166 ORTHO05D000992 5.7e-07 58.9 35 80.0
BraA05t22795Z Brassica rapa HOM05D001166 ORTHO05D000992 5.7e-07 58.9 35 80.0
TWI18G0984 Tripterygium wilfordii HOM05D001166 ORTHO05D000992 5.7e-07 58.9 31 87.1
TWI36G0272 Tripterygium wilfordii HOM05D001166 ORTHO05D000992 5.7e-07 58.9 31 87.1
TWI36G0628 Tripterygium wilfordii HOM05D001166 ORTHO05D000992 5.7e-07 58.9 31 87.1
CDE08G0435 Ceratophyllum demersum HOM05D001166 ORTHO05D000992 7.5e-07 58.5 38 71.1
Duzib151G0299 Durio zibethinus HOM05D001166 ORTHO05D000992 7.5e-07 58.5 39 69.2
Nn7g37565 Nelumbo nucifera HOM05D001166 ORTHO05D000992 7.5e-07 58.5 32 81.2
CARHR082250 Cardamine hirsuta HOM05D001166 ORTHO05D000992 9.8e-07 58.2 39 74.4
SalBow6G3218 Salvia bowleyana HOM05D001166 ORTHO05D000992 9.8e-07 58.2 39 69.2
THA.LOC104819022 Tarenaya hassleriana HOM05D001166 ORTHO05D000992 9.8e-07 58.2 39 74.4
Lj3g0019971 Lotus japonicus HOM05D001166 ORTHO05D000992 1.3e-06 57.8 32 84.4
Psat5g290680 Pisum sativum HOM05D001166 ORTHO05D000992 1.3e-06 57.8 41 70.7
Thecc.01G204900 Theobroma cacao HOM05D001166 ORTHO05D000992 1.3e-06 57.8 39 71.8
BcaB03g14693 Brassica carinata HOM05D001166 ORTHO05D000992 1.7e-06 57.4 37 73.0
CiPaw.01G095200 Carya illinoinensis HOM05D001166 ORTHO05D000992 1.7e-06 57.4 37 75.7
Migut.D00760 Erythranthe guttata HOM05D001166 ORTHO05D000992 1.7e-06 57.4 39 69.2
Thhalv10002175m.g Eutrema salsugineum HOM05D001166 ORTHO05D000992 1.7e-06 57.4 39 74.4
HanXRQChr11g0347341 Helianthus annuus HOM05D001166 ORTHO05D000992 1.7e-06 57.4 39 71.8
Peaxi162Scf00390g00017 Petunia axillaris HOM05D001166 ORTHO05D000992 1.7e-06 57.4 37 73.0
TAR365G0651 Trochodendron aralioides HOM05D001166 ORTHO05D000992 1.7e-06 57.4 39 66.7
Actinidia23133 Actinidia chinensis HOM05D001166 ORTHO05D000992 2.2e-06 57.0 39 74.4
BcaC05g29551 Brassica carinata HOM05D001166 ORTHO05D000992 2.2e-06 57.0 35 77.1
Carub.0003s0712 Capsella rubella HOM05D001166 ORTHO05D000992 2.2e-06 57.0 33 78.8
Ciclev10016354m.g Citrus clementina HOM05D001166 ORTHO05D000992 2.2e-06 57.0 31 80.6
Os05g0305700 Oryza sativa ssp. japonica HOM05D001166 ORTHO05D000992 2.2e-06 57.0 31 77.4
THA.LOC104802640 Tarenaya hassleriana HOM05D001166 ORTHO05D000992 2.2e-06 57.0 33 78.8
Sed0024255 Sechium edule HOM05D001166 ORTHO05D000992 2.8e-06 56.6 32 78.1
CANSAT78G1110 Cannabis sativa HOM05D001166 ORTHO05D000992 3.7e-06 56.2 32 78.1
ECA248G1315 Erigeron canadensis HOM05D001166 ORTHO05D000992 3.7e-06 56.2 30 86.7
Hma1.2p1_0161F.1_g071800 Hydrangea macrophylla HOM05D001166 ORTHO05D000992 3.7e-06 56.2 39 69.2
CiPaw.01G095300 Carya illinoinensis HOM05D001166 ORTHO05D000992 4.9e-06 55.8 35 74.3
Duzib133G0967 Durio zibethinus HOM05D001166 ORTHO05D000992 4.9e-06 55.8 30 83.3
Thhalv10015643m.g Eutrema salsugineum HOM05D001166 ORTHO05D000992 4.9e-06 55.8 39 71.8
Lj2A1109G68 Lonicera japonica HOM05D001166 ORTHO05D000992 4.9e-06 55.8 37 67.6
Manes.13G057700 Manihot esculenta HOM05D001166 ORTHO05D000992 4.9e-06 55.8 39 71.8
PSO837G0040 Papaver somniferum HOM05D001166 ORTHO05D000992 4.9e-06 55.8 34 73.5
Cfa015205 Carpinus fangiana HOM05D001166 ORTHO05D000992 6.3e-06 55.5 33 78.8
THA.LOC104822454 Tarenaya hassleriana HOM05D001166 ORTHO05D000992 6.3e-06 55.5 30 83.3
Duzib138G0233 Durio zibethinus HOM05D001166 ORTHO05D000992 8.3e-06 55.1 39 66.7
Eucgr.G02017 Eucalyptus grandis HOM05D001166 ORTHO05D000992 8.3e-06 55.1 39 64.1
Thhalv10003378m.g Eutrema salsugineum HOM05D001166 ORTHO05D000992 8.3e-06 55.1 39 71.8
PSO017G3126 Papaver somniferum HOM05D001166 ORTHO05D000992 8.3e-06 55.1 34 73.5
TPR.G18625 Trifolium pratense HOM05D001166 ORTHO05D000992 8.3e-06 55.1 39 66.7


User provided reference genes

Program Settings