Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow2G0856 Salvia bowleyana HOM05D006317 ORTHO05D007852 1.5e-60 236.1 127 100.0
SGA_v2.0_scaffold25G11134 Striga asiatica HOM05D006317 ORTHO05D007852 1.1e-47 193.4 116 88.8
Oeu051968.1 Olea europaea HOM05D006317 ORTHO05D007852 4.6e-46 188.0 120 85.0
Rhsim11G0071000 Rhododendron simsii HOM05D006317 ORTHO05D007852 4.6e-46 188.0 115 85.2
Migut.N03266 Erythranthe guttata HOM05D006317 ORTHO05D007852 6.0e-46 187.6 116 85.3
Actinidia29484 Actinidia chinensis HOM05D006317 ORTHO05D007852 7.8e-46 187.2 117 84.6
Oeu021883.1 Olea europaea HOM05D006317 ORTHO05D007852 1.0e-45 186.8 120 84.2
MSTRG.25364 Avicennia marina HOM05D006317 ORTHO05D007852 6.6e-45 184.1 120 81.7
CSS0008085 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 8.7e-45 183.7 120 81.7
CSS0027136 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 1.1e-44 183.3 115 83.5
Hma1.2p1_0420F.1_g149670 Hydrangea macrophylla HOM05D006317 ORTHO05D007852 1.1e-44 183.3 115 83.5
Cfa018120 Carpinus fangiana HOM05D006317 ORTHO05D007852 1.5e-44 183.0 122 80.3
CiPaw.15G032500 Carya illinoinensis HOM05D006317 ORTHO05D007852 1.5e-44 183.0 122 80.3
Dinv27277 Davidia involucrata HOM05D006317 ORTHO05D007852 1.9e-44 182.6 115 82.6
Cc10_g12550 Coffea canephora HOM05D006317 ORTHO05D007852 2.5e-44 182.2 120 84.2
QL09p032738 Quercus lobata HOM05D006317 ORTHO05D007852 5.6e-44 181.0 121 80.2
unitig_22.g5398 Utricularia gibba HOM05D006317 ORTHO05D007852 7.3e-44 180.6 120 83.3
ECA246G3352 Erigeron canadensis HOM05D006317 ORTHO05D007852 9.6e-44 180.3 120 80.8
MELO3C010655.2 Cucumis melo HOM05D006317 ORTHO05D007852 1.3e-43 179.9 115 81.7
RcHm_v2.0_Chr6g0296581 Rosa chinensis HOM05D006317 ORTHO05D007852 1.3e-43 179.9 120 80.8
CSS0006686 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 1.6e-43 179.5 117 79.5
Lsat_1_v5_gn_6_109060 Lactuca sativa HOM05D006317 ORTHO05D007852 2.1e-43 179.1 115 80.9
Sed0014816 Sechium edule HOM05D006317 ORTHO05D007852 2.8e-43 178.7 120 78.3
CsaV3_6G034090 Cucumis sativus L. HOM05D006317 ORTHO05D007852 4.8e-43 177.9 115 80.9
Peaxi162Scf01003g00121 Petunia axillaris HOM05D006317 ORTHO05D007852 4.8e-43 177.9 115 80.9
GSVIVG01036785001 Vitis vinifera HOM05D006317 ORTHO05D007852 4.8e-43 177.9 115 82.6
TWI32G0551 Tripterygium wilfordii HOM05D006317 ORTHO05D007852 6.2e-43 177.6 122 77.0
Gohir.A05G237800 Gossypium hirsutum HOM05D006317 ORTHO05D007852 8.1e-43 177.2 120 80.0
Nitab4.5_0002045g0100 Nicotiana tabacum HOM05D006317 ORTHO05D007852 8.1e-43 177.2 115 80.0
Nitab4.5_0001168g0010 Nicotiana tabacum HOM05D006317 ORTHO05D007852 1.8e-42 176.0 115 79.1
TAR375G0871 Trochodendron aralioides HOM05D006317 ORTHO05D007852 1.8e-42 176.0 113 80.5
arahy.Tifrunner.gnm1.ann1.0GY0RD Arachis hypogaea HOM05D006317 ORTHO05D007852 2.4e-42 175.6 129 72.1
arahy.Tifrunner.gnm1.ann1.ID1H8K Arachis hypogaea HOM05D006317 ORTHO05D007852 2.4e-42 175.6 129 72.1
CANSAT35G0412 Cannabis sativa HOM05D006317 ORTHO05D007852 2.4e-42 175.6 120 77.5
FvH4_2g27730 Fragaria vesca HOM05D006317 ORTHO05D007852 2.4e-42 175.6 120 77.5
FAN20G1754 Fragaria x ananassa HOM05D006317 ORTHO05D007852 2.4e-42 175.6 120 77.5
Phvul.009G129100 Phaseolus vulgaris HOM05D006317 ORTHO05D007852 2.4e-42 175.6 120 77.5
Sed0004620 Sechium edule HOM05D006317 ORTHO05D007852 2.4e-42 175.6 120 77.5
Dinv14667 Davidia involucrata HOM05D006317 ORTHO05D007852 4.0e-42 174.9 115 80.0
unitig_8.g3836 Utricularia gibba HOM05D006317 ORTHO05D007852 4.0e-42 174.9 115 80.9
Gohir.D05G239800 Gossypium hirsutum HOM05D006317 ORTHO05D007852 5.3e-42 174.5 120 78.3
Gorai.009G248700 Gossypium raimondii HOM05D006317 ORTHO05D007852 5.3e-42 174.5 120 78.3
Potri.019G066600 Populus trichocarpa HOM05D006317 ORTHO05D007852 5.3e-42 174.5 119 78.2
Solyc11g005000.2 Solanum lycopersicum HOM05D006317 ORTHO05D007852 5.3e-42 174.5 115 79.1
Ciclev10002865m.g Citrus clementina HOM05D006317 ORTHO05D007852 6.9e-42 174.1 120 76.7
FAN24G3505 Fragaria x ananassa HOM05D006317 ORTHO05D007852 6.9e-42 174.1 120 76.7
PGSC0003DMG400006049 Solanum tuberosum HOM05D006317 ORTHO05D007852 6.9e-42 174.1 115 80.0
Thecc.08G132100 Theobroma cacao HOM05D006317 ORTHO05D007852 6.9e-42 174.1 115 78.3
Glyma.04G246100 Glycine max HOM05D006317 ORTHO05D007852 9.0e-42 173.7 120 76.7
Lalb_Chr08g0241161 Lupinus albus HOM05D006317 ORTHO05D007852 9.0e-42 173.7 120 76.7
TWI34G0863 Tripterygium wilfordii HOM05D006317 ORTHO05D007852 9.0e-42 173.7 122 76.2
Medtr3g088525 Medicago truncatula HOM05D006317 ORTHO05D007852 1.2e-41 173.3 120 77.5
VMungo1309G0699 Vigna mungo HOM05D006317 ORTHO05D007852 1.2e-41 173.3 108 84.3
CAN.G342.14 Capsicum annuum HOM05D006317 ORTHO05D007852 2.6e-41 172.2 115 78.3
Atru.chr13.1550 Acer truncatum HOM05D006317 ORTHO05D007852 4.5e-41 171.4 120 75.8
Manes.02G167400 Manihot esculenta HOM05D006317 ORTHO05D007852 4.5e-41 171.4 120 75.8
Nn1g09356 Nelumbo nucifera HOM05D006317 ORTHO05D007852 4.5e-41 171.4 113 77.0
Prupe.1G490600 Prunus persica HOM05D006317 ORTHO05D007852 4.5e-41 171.4 120 77.5
Glyma.06G116700 Glycine max HOM05D006317 ORTHO05D007852 5.8e-41 171.0 120 75.8
Psat5g085080 Pisum sativum HOM05D006317 ORTHO05D007852 9.9e-41 170.2 120 75.8
Sopen11g001020 Solanum pennellii HOM05D006317 ORTHO05D007852 9.9e-41 170.2 115 77.4
Duzib041G0795 Durio zibethinus HOM05D006317 ORTHO05D007852 1.3e-40 169.9 115 75.7
Duzib116G0606 Durio zibethinus HOM05D006317 ORTHO05D007852 1.3e-40 169.9 115 75.7
Manes.18G081900 Manihot esculenta HOM05D006317 ORTHO05D007852 1.3e-40 169.9 120 75.0
THA.LOC104813677 Tarenaya hassleriana HOM05D006317 ORTHO05D007852 1.3e-40 169.9 120 75.0
Lalb_Chr23g0271161 Lupinus albus HOM05D006317 ORTHO05D007852 1.7e-40 169.5 107 82.2
Cpa.g.sc64.145 Carica papaya HOM05D006317 ORTHO05D007852 2.2e-40 169.1 120 75.0
PGR044G1554 Punica granatum HOM05D006317 ORTHO05D007852 2.9e-40 168.7 120 75.0
ATR1101G062 Amborella trichopoda HOM05D006317 ORTHO05D007852 3.8e-40 168.3 120 73.3
Eucgr.D00248 Eucalyptus grandis HOM05D006317 ORTHO05D007852 3.8e-40 168.3 120 73.3
Sc10g0008060 Simmondsia chinensis HOM05D006317 ORTHO05D007852 3.8e-40 168.3 120 74.2
Lj1g0010212 Lotus japonicus HOM05D006317 ORTHO05D007852 6.4e-40 167.5 120 75.8
Carub.0002s2423 Capsella rubella HOM05D006317 ORTHO05D007852 8.4e-40 167.2 120 74.2
CDE06G2198 Ceratophyllum demersum HOM05D006317 ORTHO05D007852 8.4e-40 167.2 117 74.4
HanXRQChr05g0148711 Helianthus annuus HOM05D006317 ORTHO05D007852 3.2e-39 165.2 108 80.6
CARHR070830 Cardamine hirsuta HOM05D006317 ORTHO05D007852 5.4e-39 164.5 120 73.3
Aa31LG4G7370 Aethionema arabicum HOM05D006317 ORTHO05D007852 7.1e-39 164.1 120 73.3
Aqoxy1G01739 Aquilegia oxysepala HOM05D006317 ORTHO05D007852 1.2e-38 163.3 120 74.2
AT1G77350 Arabidopsis thaliana HOM05D006317 ORTHO05D007852 1.2e-38 163.3 118 73.7
Thhalv10019323m.g Eutrema salsugineum HOM05D006317 ORTHO05D007852 1.2e-38 163.3 120 72.5
A08p28870 Brassica napus HOM05D006317 ORTHO05D007852 4.6e-38 161.4 122 71.3
CDE07G1891 Ceratophyllum demersum HOM05D006317 ORTHO05D007852 4.6e-38 161.4 117 73.5
MBI03_g35425_MAGBIO Magnolia biondii HOM05D006317 ORTHO05D007852 7.9e-38 160.6 113 74.3
BcaB07g32159 Brassica carinata HOM05D006317 ORTHO05D007852 3.0e-37 158.7 120 70.0
C08p20980 Brassica napus HOM05D006317 ORTHO05D007852 3.9e-37 158.3 115 73.0
BolC8t49735H Brassica oleracea HOM05D006317 ORTHO05D007852 3.9e-37 158.3 115 73.0
BcaC06g34898 Brassica carinata HOM05D006317 ORTHO05D007852 5.1e-37 157.9 117 70.9
BolC7t42733H Brassica oleracea HOM05D006317 ORTHO05D007852 5.1e-37 157.9 117 70.9
BraA06t24865Z Brassica rapa HOM05D006317 ORTHO05D007852 5.1e-37 157.9 120 70.0
Sp1g19190 Schrenkiella parvula HOM05D006317 ORTHO05D007852 5.1e-37 157.9 115 72.2
A07p14980 Brassica napus HOM05D006317 ORTHO05D007852 8.7e-37 157.1 120 71.7
BraA07t29244Z Brassica rapa HOM05D006317 ORTHO05D007852 8.7e-37 157.1 120 71.7
BraA08t34818Z Brassica rapa HOM05D006317 ORTHO05D007852 8.7e-37 157.1 115 72.2
Zm00001eb128810 Zea mays HOM05D006317 ORTHO05D007852 8.7e-37 157.1 120 70.8
BcaB03g14259 Brassica carinata HOM05D006317 ORTHO05D007852 1.1e-36 156.8 118 69.5
A06p17730 Brassica napus HOM05D006317 ORTHO05D007852 1.1e-36 156.8 120 69.2
C07p22030 Brassica napus HOM05D006317 ORTHO05D007852 1.1e-36 156.8 114 71.9
Thhalv10009123m.g Eutrema salsugineum HOM05D006317 ORTHO05D007852 1.9e-36 156.0 121 71.1
Os05g0486200 Oryza sativa ssp. japonica HOM05D006317 ORTHO05D007852 7.4e-36 154.1 119 69.7
Sabra19G0078300 Salix brachista HOM05D006317 ORTHO05D007852 7.4e-36 154.1 133 68.4
ClCG08G005990 Citrullus lanatus HOM05D006317 ORTHO05D007852 2.1e-35 152.5 170 54.7
AUR62016336 Chenopodium quinoa HOM05D006317 ORTHO05D007852 3.7e-35 151.8 115 67.8
AL2G37550 Arabidopsis lyrata HOM05D006317 ORTHO05D007852 6.2e-35 151.0 143 61.5
Ah.01g020580 Amaranthus hybridus HOM05D006317 ORTHO05D007852 1.4e-34 149.8 115 67.0
HPP92_021212 Vanilla planifolia HOM05D006317 ORTHO05D007852 2.0e-33 146.0 115 68.7
Mapoly0014s0111 Marchantia polymorpha HOM05D006317 ORTHO05D007852 4.5e-33 144.8 109 65.1
SHI09189 Sapria himalayana HOM05D006317 ORTHO05D007852 4.5e-33 144.8 128 64.1
vmacro00858 Vaccinium macrocarpon HOM05D006317 ORTHO05D007852 9.9e-33 143.7 91 82.4
vmacro16444 Vaccinium macrocarpon HOM05D006317 ORTHO05D007852 2.2e-32 142.5 94 83.0
CBR_g12067 Chara braunii HOM05D006317 ORTHO05D007852 2.9e-32 142.1 109 67.0
FAN27G3154 Fragaria x ananassa HOM05D006317 ORTHO05D007852 2.4e-31 139.0 91 79.1
AagrBONN_evm.TU.Sc2ySwM_344.4689 Anthoceros agrestis HOM05D006317 ORTHO05D007852 1.2e-30 136.7 109 61.5
MBI06_g36652_MAGBIO Magnolia biondii HOM05D006317 ORTHO05D007852 3.5e-30 135.2 113 67.3
COL.COLO4_05688 Corchorus olitorius HOM05D006317 ORTHO05D007852 2.3e-29 132.5 91 75.8
SMO298G0052 Selaginella moellendorffii HOM05D006317 ORTHO05D007852 5.6e-28 127.9 101 65.3
EL10Ac9g21899 Beta vulgaris HOM05D006317 ORTHO05D007852 6.9e-26 120.9 91 69.2
BcaB03g14260 Brassica carinata HOM05D006317 ORTHO05D007852 3.2e-23 112.1 128 55.5
Nn7g37402 Nelumbo nucifera HOM05D006317 ORTHO05D007852 1.6e-22 109.8 70 77.1
DCAR_018876 Daucus carota HOM05D006317 ORTHO05D007852 5.1e-21 104.8 69 79.7
Haze_17997 Corylus avellana HOM05D001650 ORTHO05D001592 4.1e-18 95.1 119 52.1
SGA_v2.0_scaffold28G11977 Striga asiatica HOM05D006317 ORTHO05D007852 1.4e-15 86.7 55 87.3
CSS0043705 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 2.7e-14 82.4 46 84.8
Gohir.A02G071601 Gossypium hirsutum HOM05D006317 ORTHO05D007852 9.7e-12 73.9 58 69.0
QL05p046423 Quercus lobata HOM05D006317 ORTHO05D007852 2.0e-09 66.2 52 69.2
FAN15G1039 Fragaria x ananassa HOM05D006317 ORTHO05D007852 2.2e-08 62.8 37 81.1
BolC5t30761H Brassica oleracea HOM05D006317 ORTHO05D007852 6.5e-08 61.2 52 65.4


User provided reference genes

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