Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow2G0810 Salvia bowleyana HOM05D006060 ORTHO05D007268 4.1e-67 258.1 145 100.0
MSTRG.7750 Avicennia marina HOM05D006060 ORTHO05D007268 1.9e-59 232.6 142 88.0
Migut.L01198 Erythranthe guttata HOM05D006060 ORTHO05D007268 1.1e-56 223.4 149 85.2
SGA_v2.0_scaffold36G14451 Striga asiatica HOM05D006060 ORTHO05D007268 1.4e-51 206.5 145 82.1
unitig_747.g21188 Utricularia gibba HOM05D006060 ORTHO05D007268 3.5e-50 201.8 147 76.2
Oeu048147.1 Olea europaea HOM05D006060 ORTHO05D007268 7.3e-48 194.1 140 70.0
SGA_v2.0_scaffold16G07773 Striga asiatica HOM05D006060 ORTHO05D007268 9.0e-46 187.2 157 71.3
CAN.G616.32 Capsicum annuum HOM05D006060 ORTHO05D007268 4.4e-45 184.9 148 67.6
Sopen05g007220 Solanum pennellii HOM05D006060 ORTHO05D007268 4.9e-44 181.4 148 66.9
Solyc05g012400.4 Solanum lycopersicum HOM05D006060 ORTHO05D007268 1.1e-43 180.3 149 66.4
PGSC0003DMG400028321 Solanum tuberosum HOM05D006060 ORTHO05D007268 4.2e-43 178.3 147 60.5
AL1G39270 Arabidopsis lyrata HOM05D006060 ORTHO05D007268 3.0e-41 172.2 116 72.4
AT1G26470 Arabidopsis thaliana HOM05D006060 ORTHO05D007268 5.1e-41 171.4 116 71.6
Potri.010G159200 Populus trichocarpa HOM05D006060 ORTHO05D007268 5.1e-41 171.4 114 71.9
Atru.chr11.1651 Acer truncatum HOM05D006060 ORTHO05D007268 6.6e-41 171.0 114 71.9
THA.LOC104822014 Tarenaya hassleriana HOM05D006060 ORTHO05D007268 8.7e-41 170.6 116 70.7
Thhalv10009087m.g Eutrema salsugineum HOM05D006060 ORTHO05D007268 1.1e-40 170.2 116 71.6
HanXRQChr15g0477061 Helianthus annuus HOM05D006060 ORTHO05D007268 1.5e-40 169.9 116 70.7
Manes.01G028500 Manihot esculenta HOM05D006060 ORTHO05D007268 1.5e-40 169.9 114 71.1
ECA246G0948 Erigeron canadensis HOM05D006060 ORTHO05D007268 1.9e-40 169.5 116 71.6
Sp1g22270 Schrenkiella parvula HOM05D006060 ORTHO05D007268 1.9e-40 169.5 116 70.7
CARHR025490 Cardamine hirsuta HOM05D006060 ORTHO05D007268 3.3e-40 168.7 116 71.6
Prupe.1G285900 Prunus persica HOM05D006060 ORTHO05D007268 3.3e-40 168.7 114 70.2
CiPaw.06G092000 Carya illinoinensis HOM05D006060 ORTHO05D007268 4.3e-40 168.3 116 69.8
Potri.008G095100 Populus trichocarpa HOM05D006060 ORTHO05D007268 4.3e-40 168.3 114 70.2
Lsat_1_v5_gn_3_55960 Lactuca sativa HOM05D006060 ORTHO05D007268 1.3e-39 166.8 116 70.7
PGR102G1832 Punica granatum HOM05D006060 ORTHO05D007268 1.3e-39 166.8 115 71.3
CSS0014880 Camellia sinensis var. sinensis HOM05D006060 ORTHO05D007268 2.1e-39 166.0 116 69.8
Thecc.02G332700 Theobroma cacao HOM05D006060 ORTHO05D007268 2.1e-39 166.0 116 69.8
Carub.0001s2455 Capsella rubella HOM05D006060 ORTHO05D007268 2.8e-39 165.6 115 69.6
FvH4_4g30180 Fragaria vesca HOM05D006060 ORTHO05D007268 4.8e-39 164.9 114 68.4
Gohir.A13G081800 Gossypium hirsutum HOM05D006060 ORTHO05D007268 4.8e-39 164.9 114 70.2
Gohir.D13G081600 Gossypium hirsutum HOM05D006060 ORTHO05D007268 4.8e-39 164.9 114 70.2
Gorai.013G093500 Gossypium raimondii HOM05D006060 ORTHO05D007268 4.8e-39 164.9 114 70.2
RcHm_v2.0_Chr4g0438511 Rosa chinensis HOM05D006060 ORTHO05D007268 4.8e-39 164.9 116 67.2
HanXRQChr12g0375301 Helianthus annuus HOM05D006060 ORTHO05D007268 6.2e-39 164.5 116 69.8
MD16G1062000 Malus domestica HOM05D006060 ORTHO05D007268 6.2e-39 164.5 114 68.4
Psat2g129720 Pisum sativum HOM05D006060 ORTHO05D007268 6.2e-39 164.5 116 67.2
BcaB03g14067 Brassica carinata HOM05D006060 ORTHO05D007268 8.1e-39 164.1 116 68.1
Ciclev10033030m.g Citrus clementina HOM05D006060 ORTHO05D007268 8.1e-39 164.1 115 68.7
Ca_24569_v3 Cicer arietinum L. HOM05D006060 ORTHO05D007268 1.4e-38 163.3 116 67.2
Sc11g0002390 Simmondsia chinensis HOM05D006060 ORTHO05D007268 1.8e-38 162.9 114 65.8
MD13G1063500 Malus domestica HOM05D006060 ORTHO05D007268 2.4e-38 162.5 114 67.5
Duzib248G0204 Durio zibethinus HOM05D006060 ORTHO05D007268 4.0e-38 161.8 114 68.4
Medtr5g044200 Medicago truncatula HOM05D006060 ORTHO05D007268 6.9e-38 161.0 144 57.6
Dinv16724 Davidia involucrata HOM05D006060 ORTHO05D007268 9.0e-38 160.6 113 68.1
Dinv34077 Davidia involucrata HOM05D006060 ORTHO05D007268 9.0e-38 160.6 116 70.7
Glyma.05G201000 Glycine max HOM05D006060 ORTHO05D007268 9.0e-38 160.6 114 66.7
TAR622G0987 Trochodendron aralioides HOM05D006060 ORTHO05D007268 1.5e-37 159.8 116 67.2
Aa31LG7G8620 Aethionema arabicum HOM05D006060 ORTHO05D007268 3.4e-37 158.7 121 66.1
TPR.G24456 Trifolium pratense HOM05D006060 ORTHO05D007268 3.4e-37 158.7 114 64.9
MELO3C012147.2 Cucumis melo HOM05D006060 ORTHO05D007268 4.5e-37 158.3 116 63.8
CsaV3_5G033260 Cucumis sativus L. HOM05D006060 ORTHO05D007268 7.6e-37 157.5 116 63.8
A07p12940 Brassica napus HOM05D006060 ORTHO05D007268 9.9e-37 157.1 121 66.9
QL03p072164 Quercus lobata HOM05D006060 ORTHO05D007268 9.9e-37 157.1 139 57.6
QL03p072544 Quercus lobata HOM05D006060 ORTHO05D007268 9.9e-37 157.1 139 57.6
VMungo0251G0770 Vigna mungo HOM05D006060 ORTHO05D007268 9.9e-37 157.1 114 64.0
BcaC06g35142 Brassica carinata HOM05D006060 ORTHO05D007268 1.3e-36 156.8 113 69.0
CANSAT64G1324 Cannabis sativa HOM05D006060 ORTHO05D007268 1.3e-36 156.8 113 67.3
HPP92_014051 Vanilla planifolia HOM05D006060 ORTHO05D007268 1.3e-36 156.8 116 63.8
FAN22G0197 Fragaria x ananassa HOM05D006060 ORTHO05D007268 1.7e-36 156.4 121 63.6
Eucgr.G02454 Eucalyptus grandis HOM05D006060 ORTHO05D007268 2.2e-36 156.0 114 65.8
Lj2g0026655 Lotus japonicus HOM05D006060 ORTHO05D007268 2.9e-36 155.6 114 64.0
GSVIVG01012208001 Vitis vinifera HOM05D006060 ORTHO05D007268 2.9e-36 155.6 117 67.5
BolC7t42457H Brassica oleracea HOM05D006060 ORTHO05D007268 3.8e-36 155.2 120 66.7
Sed0026741 Sechium edule HOM05D006060 ORTHO05D007268 4.9e-36 154.8 116 62.1
Aqoxy3G00506 Aquilegia oxysepala HOM05D006060 ORTHO05D007268 6.4e-36 154.5 115 62.6
MBI16_g10268_MAGBIO Magnolia biondii HOM05D006060 ORTHO05D007268 6.4e-36 154.5 114 65.8
TWI31G0802 Tripterygium wilfordii HOM05D006060 ORTHO05D007268 6.4e-36 154.5 126 62.7
C05p24530 Brassica napus HOM05D006060 ORTHO05D007268 8.4e-36 154.1 113 66.4
C07p19380 Brassica napus HOM05D006060 ORTHO05D007268 8.4e-36 154.1 129 62.8
Duzib251G0249 Durio zibethinus HOM05D006060 ORTHO05D007268 1.4e-35 153.3 113 65.5
Lalb_Chr04g0255711 Lupinus albus HOM05D006060 ORTHO05D007268 1.4e-35 153.3 116 60.3
Phvul.002G282400 Phaseolus vulgaris HOM05D006060 ORTHO05D007268 1.4e-35 153.3 114 62.3
arahy.Tifrunner.gnm1.ann1.GS86GR Arachis hypogaea HOM05D006060 ORTHO05D007268 2.4e-35 152.5 116 63.8
PSO017G1874 Papaver somniferum HOM05D006060 ORTHO05D007268 2.4e-35 152.5 114 65.8
Peaxi162Scf00175g00019 Petunia axillaris HOM05D006060 ORTHO05D007268 3.2e-35 152.1 90 80.0
A09p39890 Brassica napus HOM05D006060 ORTHO05D007268 4.2e-35 151.8 122 63.1
EL10Ac6g14984 Beta vulgaris HOM05D006060 ORTHO05D007268 7.1e-35 151.0 127 59.1
Medtr6g053980 Medicago truncatula HOM05D006060 ORTHO05D007268 7.1e-35 151.0 113 63.7
Glyma.08G008300 Glycine max HOM05D006060 ORTHO05D007268 9.3e-35 150.6 114 64.0
PSO478G3582 Papaver somniferum HOM05D006060 ORTHO05D007268 1.6e-34 149.8 114 64.9
Nitab4.5_0000231g0430 Nicotiana tabacum HOM05D006060 ORTHO05D007268 3.5e-34 148.7 88 78.4
ClCG00G002570 Citrullus lanatus HOM05D006060 ORTHO05D007268 4.6e-34 148.3 129 57.4
ClCG05G023750 Citrullus lanatus HOM05D006060 ORTHO05D007268 4.6e-34 148.3 129 57.4
Hund05841 Selenicereus undatus HOM05D006060 ORTHO05D007268 6.0e-34 147.9 116 62.1
ATR0064G055 Amborella trichopoda HOM05D006060 ORTHO05D007268 7.9e-34 147.5 114 63.2
Nn4g23399 Nelumbo nucifera HOM05D006060 ORTHO05D007268 7.9e-34 147.5 113 63.7
BolC5t31187H Brassica oleracea HOM05D006060 ORTHO05D007268 1.0e-33 147.1 127 59.8
PGSC0003DMG400042856 Solanum tuberosum HOM05D006060 ORTHO05D007268 1.0e-33 147.1 145 55.9
Sopen05g007230 Solanum pennellii HOM05D006060 ORTHO05D007268 2.3e-33 146.0 139 55.4
Solyc05g012410.2 Solanum lycopersicum HOM05D006060 ORTHO05D007268 3.9e-33 145.2 139 55.4
MD02G1257200 Malus domestica HOM05D006060 ORTHO05D007268 6.7e-33 144.4 113 60.2
Hund25185 Selenicereus undatus HOM05D006060 ORTHO05D007268 1.6e-31 139.8 150 49.3
Os05g0512500 Oryza sativa ssp. japonica HOM05D006060 ORTHO05D007268 1.1e-30 137.1 114 54.4
SEGI_32210 Sequoiadendron giganteum HOM05D006060 ORTHO05D007268 1.4e-30 136.7 110 61.8
AUR62003112 Chenopodium quinoa HOM05D006060 ORTHO05D007268 1.5e-29 133.3 171 43.9
Nitab4.5_0004171g0060 Nicotiana tabacum HOM05D006060 ORTHO05D007268 7.6e-29 131.0 84 75.0
Zm00001eb292660 Zea mays HOM05D006060 ORTHO05D007268 1.7e-28 129.8 99 59.6
Actinidia32300 Actinidia chinensis HOM05D004724 ORTHO05D007268 2.2e-28 129.4 85 70.6
Lalb_Chr10g0098731 Lupinus albus HOM05D006060 ORTHO05D007268 4.9e-28 128.3 92 60.9
CDE02G4092 Ceratophyllum demersum HOM05D006060 ORTHO05D007268 8.4e-28 127.5 113 56.6
Sabra10G0120900 Salix brachista HOM05D006060 ORTHO05D007268 1.4e-27 126.7 116 59.5
Sabra08G0071500 Salix brachista HOM05D006060 ORTHO05D007268 1.9e-27 126.3 133 50.4
FAN07G0043 Fragaria x ananassa HOM05D006060 ORTHO05D007268 2.4e-27 125.9 114 57.9
SMO351G0453 Selaginella moellendorffii HOM05D006060 ORTHO05D007268 7.1e-27 124.4 113 52.2
BraA07t29067Z Brassica rapa HOM05D006060 ORTHO05D007268 1.2e-26 123.6 116 57.8
FAN12G2760 Fragaria x ananassa HOM05D006060 ORTHO05D007268 2.1e-26 122.9 114 57.0
A03p24590 Brassica napus HOM05D006060 ORTHO05D007268 2.7e-26 122.5 112 57.1
BraA09t39488Z Brassica rapa HOM05D006060 ORTHO05D007268 2.7e-26 122.5 100 62.0
BraA09t39056Z Brassica rapa HOM05D006060 ORTHO05D007268 4.6e-26 121.7 112 57.1
Mapoly0056s0111 Marchantia polymorpha HOM05D006060 ORTHO05D007268 4.6e-26 121.7 90 62.2
Actinidia28644 Actinidia chinensis HOM05D006060 ORTHO05D007268 3.9e-25 118.6 121 53.7
FAN17G1885 Fragaria x ananassa HOM05D006060 ORTHO05D007268 3.9e-25 118.6 107 58.9
PGSC0003DMG400041308 Solanum tuberosum HOM05D006060 ORTHO05D007268 5.1e-25 118.2 121 53.7
AagrBONN_evm.TU.Sc2ySwM_228.4858 Anthoceros agrestis HOM05D006821 ORTHO05D007268 8.7e-25 117.5 93 61.3
Ah.03g138960 Amaranthus hybridus HOM05D006060 ORTHO05D007268 1.5e-24 116.7 116 51.7
arahy.Tifrunner.gnm1.ann1.KWWI2Y Arachis hypogaea HOM05D006060 ORTHO05D007268 2.5e-24 115.9 129 51.2
Cc11_g12110 Coffea canephora HOM05D006060 ORTHO05D007268 3.3e-24 115.5 70 77.1
Pp3c14_19070 Physcomitrium patens HOM05D006060 ORTHO05D007268 1.8e-22 109.8 93 53.8
Haze_11918 Corylus avellana HOM05D006060 ORTHO05D007268 6.9e-22 107.8 70 67.1
COL.COLO4_27898 Corchorus olitorius HOM05D006060 ORTHO05D007268 3.8e-20 102.1 69 65.2
AUR62007927 Chenopodium quinoa HOM05D006060 ORTHO05D007268 1.4e-19 100.1 70 61.4
C02p24560 Brassica napus HOM05D006060 ORTHO05D007268 3.0e-17 92.4 83 56.6
CBR_g4585 Chara braunii HOM05D006060 ORTHO05D007268 2.0e-13 79.7 66 53.0
TPR.G29681 Trifolium pratense HOM05D006060 ORTHO05D007268 2.5e-11 72.8 60 55.0
A07p29750 Brassica napus HOM05D006060 ORTHO05D007268 5.5e-11 71.6 80 51.2
Cc11_g12100 Coffea canephora HOM05D006060 ORTHO05D007268 7.2e-11 71.2 103 58.3
BcaB03g11990 Brassica carinata HOM05D006060 ORTHO05D007268 7.9e-10 67.8 50 60.0
DCAR_007189 Daucus carota HOM05D006060 ORTHO05D007268 2.8e-07 59.3 51 51.0


User provided reference genes

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