Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow2G0807 Salvia bowleyana HOM05D001937 ORTHO05D007024 5.7e-92 340.9 171 100.0
SalBow1G8218 Salvia bowleyana HOM05D001937 ORTHO05D007024 1.6e-89 332.8 169 98.2
SalBow1G2752 Salvia bowleyana HOM05D001937 ORTHO05D007024 7.7e-89 330.5 171 98.2
SalBow1G1280 Salvia bowleyana HOM05D001937 ORTHO05D007024 2.9e-88 328.6 171 97.7
Migut.N00430 Erythranthe guttata HOM05D001937 ORTHO05D007024 2.3e-77 292.4 170 84.7
MSTRG.3701 Avicennia marina HOM05D001937 ORTHO05D007024 5.7e-76 287.7 170 82.4
CSS0034620 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 1.7e-75 286.2 170 81.8
CSS0040995 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 1.7e-75 286.2 170 81.8
SGA_v2.0_scaffold14G07136 Striga asiatica HOM05D001937 ORTHO05D007024 2.2e-75 285.8 173 83.2
Actinidia06125 Actinidia chinensis HOM05D001937 ORTHO05D007024 2.8e-75 285.4 167 82.0
Lj1P823T23 Lonicera japonica HOM05D001937 ORTHO05D007024 1.4e-74 283.1 170 80.0
Actinidia11252 Actinidia chinensis HOM05D001937 ORTHO05D007024 1.8e-74 282.7 167 80.8
Cfa005699 Carpinus fangiana HOM05D001937 ORTHO05D007024 3.2e-74 282.0 169 79.3
Manes.11G123000 Manihot esculenta HOM05D001937 ORTHO05D007024 4.1e-74 281.6 171 80.7
TWI12G0886 Tripterygium wilfordii HOM05D001937 ORTHO05D007024 5.4e-74 281.2 170 81.2
Haze_10549 Corylus avellana HOM05D001937 ORTHO05D007024 9.2e-74 280.4 169 78.7
Nitab4.5_0000761g0030 Nicotiana tabacum HOM05D001937 ORTHO05D007024 9.2e-74 280.4 172 81.4
Hma1.2p1_0587F.1_g184190 Hydrangea macrophylla HOM05D001937 ORTHO05D007024 2.0e-73 279.3 171 78.9
TAR636G1691 Trochodendron aralioides HOM05D001937 ORTHO05D007024 3.5e-73 278.5 170 78.2
EL10Ac7g17851 Beta vulgaris HOM05D001937 ORTHO05D007024 4.5e-73 278.1 170 80.0
AUR62001097 Chenopodium quinoa HOM05D001937 ORTHO05D007024 5.9e-73 277.7 170 80.0
Sc14g0006180 Simmondsia chinensis HOM05D001937 ORTHO05D007024 5.9e-73 277.7 169 79.9
Solyc09g010560.3 Solanum lycopersicum HOM05D001937 ORTHO05D007024 5.9e-73 277.7 170 80.0
Sopen09g005280 Solanum pennellii HOM05D001937 ORTHO05D007024 5.9e-73 277.7 170 80.0
Rhsim09G0056700 Rhododendron simsii HOM05D001937 ORTHO05D007024 7.8e-73 277.3 170 79.4
Ah.08g214380 Amaranthus hybridus HOM05D001937 ORTHO05D007024 1.0e-72 276.9 169 79.3
Aqoxy2G01407 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 2.3e-72 275.8 169 78.7
Aqoxy2G01413 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 2.3e-72 275.8 169 78.7
Aqoxy4G02972 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 2.3e-72 275.8 169 78.7
Cc09_g08410 Coffea canephora HOM05D001937 ORTHO05D007024 2.3e-72 275.8 170 78.2
Nitab4.5_0004091g0060 Nicotiana tabacum HOM05D001937 ORTHO05D007024 2.3e-72 275.8 171 78.9
PGSC0003DMG400008847 Solanum tuberosum HOM05D001937 ORTHO05D007024 2.3e-72 275.8 170 79.4
MD07G1077100 Malus domestica HOM05D001937 ORTHO05D007024 2.9e-72 275.4 169 78.7
Medtr4g093870 Medicago truncatula HOM05D001937 ORTHO05D007024 2.9e-72 275.4 171 79.5
QL11p024047 Quercus lobata HOM05D001937 ORTHO05D007024 2.9e-72 275.4 169 76.9
AUR62008924 Chenopodium quinoa HOM05D001937 ORTHO05D007024 3.9e-72 275.0 170 79.4
Lsat_1_v5_gn_6_11080 Lactuca sativa HOM05D001937 ORTHO05D007024 3.9e-72 275.0 169 78.7
CAN.G97.40 Capsicum annuum HOM05D001937 ORTHO05D007024 5.0e-72 274.6 170 78.2
Ciclev10018533m.g Citrus clementina HOM05D001937 ORTHO05D007024 8.6e-72 273.9 169 79.3
COL.COLO4_33143 Corchorus olitorius HOM05D001937 ORTHO05D007024 8.6e-72 273.9 170 77.1
ECA233G4596 Erigeron canadensis HOM05D001937 ORTHO05D007024 8.6e-72 273.9 171 76.6
THA.LOC104823845 Tarenaya hassleriana HOM05D001937 ORTHO05D007024 1.1e-71 273.5 170 76.5
HanXRQChr10g0312981 Helianthus annuus HOM05D001937 ORTHO05D007024 1.5e-71 273.1 171 78.4
unitig_0.g658 Utricularia gibba HOM05D001937 ORTHO05D007024 1.9e-71 272.7 169 81.1
CARHR214920 Cardamine hirsuta HOM05D001937 ORTHO05D007024 2.5e-71 272.3 169 76.3
Thhalv10027622m.g Eutrema salsugineum HOM05D001937 ORTHO05D007024 3.3e-71 271.9 169 76.3
Sp7g04200 Schrenkiella parvula HOM05D001937 ORTHO05D007024 3.3e-71 271.9 169 75.7
Atru.chr12.1853 Acer truncatum HOM05D001937 ORTHO05D007024 4.3e-71 271.6 170 78.2
Aa31LG9G17330 Aethionema arabicum HOM05D001937 ORTHO05D007024 4.3e-71 271.6 170 75.9
CiPaw.10G131100 Carya illinoinensis HOM05D001937 ORTHO05D007024 4.3e-71 271.6 170 77.1
Duzib132G1189 Durio zibethinus HOM05D001937 ORTHO05D007024 4.3e-71 271.6 170 75.9
Phvul.002G211700 Phaseolus vulgaris HOM05D001937 ORTHO05D007024 4.3e-71 271.6 170 78.8
arahy.Tifrunner.gnm1.ann1.EYG9NG Arachis hypogaea HOM05D001937 ORTHO05D007024 9.5e-71 270.4 172 77.3
PSO017G7212 Papaver somniferum HOM05D001937 ORTHO05D007024 9.5e-71 270.4 169 74.0
C06p17940 Brassica napus HOM05D001937 ORTHO05D007024 1.2e-70 270.0 169 75.1
BolC6t36984H Brassica oleracea HOM05D001937 ORTHO05D007024 1.2e-70 270.0 169 75.1
Carub.0007s3301 Capsella rubella HOM05D001937 ORTHO05D007024 1.2e-70 270.0 170 77.1
Cpa.g.sc41.77 Carica papaya HOM05D001937 ORTHO05D007024 1.2e-70 270.0 169 77.5
Lalb_Chr05g0217681 Lupinus albus HOM05D001937 ORTHO05D007024 1.2e-70 270.0 171 76.6
Lalb_Chr16g0382841 Lupinus albus HOM05D001937 ORTHO05D007024 1.2e-70 270.0 171 77.8
BraA07t29656Z Brassica rapa HOM05D001937 ORTHO05D007024 1.6e-70 269.6 169 75.7
Ca_18373_v3 Cicer arietinum L. HOM05D001937 ORTHO05D007024 1.6e-70 269.6 172 76.2
Gohir.A03G167300 Gossypium hirsutum HOM05D001937 ORTHO05D007024 1.6e-70 269.6 170 75.9
Gohir.D02G190400 Gossypium hirsutum HOM05D001937 ORTHO05D007024 1.6e-70 269.6 170 75.9
Gorai.005G213100 Gossypium raimondii HOM05D001937 ORTHO05D007024 1.6e-70 269.6 170 75.9
MBI05_g10862_MAGBIO Magnolia biondii HOM05D001937 ORTHO05D007024 1.6e-70 269.6 169 75.1
PSO478G1455 Papaver somniferum HOM05D001937 ORTHO05D007024 1.6e-70 269.6 169 74.6
CANSAT01G0692 Cannabis sativa HOM05D001937 ORTHO05D007024 2.1e-70 269.2 169 75.7
A07p19500 Brassica napus HOM05D001937 ORTHO05D007024 2.8e-70 268.9 169 75.7
RcHm_v2.0_Chr1g0337071 Rosa chinensis HOM05D001937 ORTHO05D007024 3.6e-70 268.5 169 76.9
TPR.G2837 Trifolium pratense HOM05D001937 ORTHO05D007024 3.6e-70 268.5 171 76.6
DCAR_003140 Daucus carota HOM05D001937 ORTHO05D007024 4.7e-70 268.1 170 75.3
Lj4g0006057 Lotus japonicus HOM05D001937 ORTHO05D007024 4.7e-70 268.1 171 77.2
Eucgr.I01066 Eucalyptus grandis HOM05D001937 ORTHO05D007024 6.1e-70 267.7 170 77.6
Glyma.08G069400 Glycine max HOM05D001937 ORTHO05D007024 6.1e-70 267.7 171 77.2
VMungo0251G0821 Vigna mungo HOM05D001937 ORTHO05D007024 6.1e-70 267.7 171 77.2
Prupe.2G098100 Prunus persica HOM05D001937 ORTHO05D007024 8.0e-70 267.3 169 76.9
Sabra04G0061200 Salix brachista HOM05D001937 ORTHO05D007024 8.0e-70 267.3 162 80.2
FvH4_7g07120 Fragaria vesca HOM05D001937 ORTHO05D007024 1.0e-69 266.9 169 76.9
FAN06G4695 Fragaria x ananassa HOM05D001937 ORTHO05D007024 1.0e-69 266.9 169 76.9
FAN10G2279 Fragaria x ananassa HOM05D001937 ORTHO05D007024 1.0e-69 266.9 169 76.9
Nn2g12806 Nelumbo nucifera HOM05D001937 ORTHO05D007024 1.4e-69 266.5 173 75.7
CDE04G1916 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 1.8e-69 266.2 172 75.6
Duzib248G1173 Durio zibethinus HOM05D001937 ORTHO05D007024 1.8e-69 266.2 170 75.3
arahy.Tifrunner.gnm1.ann1.TT5FZ7 Arachis hypogaea HOM05D001937 ORTHO05D007024 2.3e-69 265.8 172 73.3
MELO3C021250.2 Cucumis melo HOM05D001937 ORTHO05D007024 2.3e-69 265.8 169 75.7
Potri.004G091000 Populus trichocarpa HOM05D001937 ORTHO05D007024 2.3e-69 265.8 162 79.6
PGR142G3997 Punica granatum HOM05D001937 ORTHO05D007024 2.3e-69 265.8 172 75.6
AT5G37830 Arabidopsis thaliana HOM05D001937 ORTHO05D007024 3.1e-69 265.4 169 74.0
FAN03G1993 Fragaria x ananassa HOM05D001937 ORTHO05D007024 3.1e-69 265.4 169 75.7
Psat7g100640 Pisum sativum HOM05D001937 ORTHO05D007024 4.0e-69 265.0 170 77.6
CsaV3_6G000030 Cucumis sativus L. HOM05D001937 ORTHO05D007024 5.2e-69 264.6 169 75.7
ClCG05G003000 Citrullus lanatus HOM05D001937 ORTHO05D007024 8.9e-69 263.8 170 74.7
Zm00001eb021240 Zea mays HOM05D001937 ORTHO05D007024 8.9e-69 263.8 169 75.7
Sed0024188 Sechium edule HOM05D001937 ORTHO05D007024 2.6e-68 262.3 169 74.6
AL7G46730 Arabidopsis lyrata HOM05D001937 ORTHO05D007024 4.4e-68 261.5 169 74.0
Thecc.02G153900 Theobroma cacao HOM05D001937 ORTHO05D007024 5.8e-68 261.2 170 73.5
ATR0559G108 Amborella trichopoda HOM05D001937 ORTHO05D007024 2.4e-66 255.8 169 74.0
Os01g0966000 Oryza sativa ssp. japonica HOM05D001937 ORTHO05D007024 4.1e-66 255.0 171 74.9
GSVIVG01034203001 Vitis vinifera HOM05D001937 ORTHO05D007024 4.1e-66 255.0 146 82.2
ATR0559G369 Amborella trichopoda HOM05D001937 ORTHO05D007024 5.0e-64 248.1 169 70.4
FAN01G0178 Fragaria x ananassa HOM05D001937 ORTHO05D007024 7.3e-63 244.2 169 72.8
SMO147G0274 Selaginella moellendorffii HOM05D001937 ORTHO05D007024 8.0e-62 240.7 161 72.0
BcaB02g08024 Brassica carinata HOM05D001937 ORTHO05D007024 1.8e-61 239.6 169 69.2
SHI12658 Sapria himalayana HOM05D001937 ORTHO05D007024 3.1e-61 238.8 170 65.9
AagrBONN_evm.TU.Sc2ySwM_368.2008 Anthoceros agrestis HOM05D001937 ORTHO05D007024 3.4e-60 235.3 162 71.6
SEGI_01532 Sequoiadendron giganteum HOM05D001937 ORTHO05D007024 3.4e-60 235.3 164 70.1
Mapoly0035s0055 Marchantia polymorpha HOM05D001937 ORTHO05D007024 8.3e-59 230.7 174 64.9
Dinv02213 Davidia involucrata HOM05D001937 ORTHO05D007024 6.6e-56 221.1 135 79.3
Dinv02208 Davidia involucrata HOM05D001937 ORTHO05D007024 1.6e-54 216.5 169 66.3
CBR_g26054 Chara braunii HOM05D000019 ORTHO05D000002 2.0e-52 209.5 165 64.2
TAR636G1243 Trochodendron aralioides HOM05D001937 ORTHO05D007024 3.4e-52 208.8 136 75.0
MCO14G182 Micromonas commoda HOM05D001937 ORTHO05D007024 1.3e-48 196.8 184 59.8
Cfa025426 Carpinus fangiana HOM05D001937 ORTHO05D007024 2.2e-43 179.5 176 57.4
Cre07.g325748 Chlamydomonas reinhardtii HOM05D001937 ORTHO05D007024 1.6e-41 173.3 141 63.8
CDE07G0097 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 1.3e-30 137.1 92 76.1
Peaxi162Scf00165g01826 Petunia axillaris HOM05D001937 ORTHO05D007024 1.1e-26 124.0 170 44.1
HPP92_019824 Vanilla planifolia HOM05D001937 ORTHO05D007024 1.3e-24 117.1 104 60.6
PRCOL_00004137 Prasinoderma coloniale HOM05D001937 ORTHO05D007024 1.4e-18 97.1 126 45.2
Oeu061583.3 Olea europaea HOM05D001937 ORTHO05D007024 5.7e-15 85.1 68 63.2


User provided reference genes

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