Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow2G0618 Salvia bowleyana HOM05D007336 ORTHO05D009339 2.0e-62 242.3 125 100.0
MSTRG.3884 Avicennia marina HOM05D007336 ORTHO05D009339 2.3e-50 202.2 125 81.6
Migut.G00122 Erythranthe guttata HOM05D007336 ORTHO05D009339 4.4e-49 198.0 125 77.6
Cc03_g01420 Coffea canephora HOM05D007336 ORTHO05D009339 2.9e-45 185.3 125 73.6
SGA_v2.0_scaffold104G30104 Striga asiatica HOM05D007336 ORTHO05D009339 8.5e-45 183.7 125 73.6
Rhsim04G0227800 Rhododendron simsii HOM05D007336 ORTHO05D009339 6.1e-43 177.6 125 68.0
Dinv29713 Davidia involucrata HOM05D002548 ORTHO05D003031 2.3e-42 175.6 118 73.7
vmacro08103 Vaccinium macrocarpon HOM05D007336 ORTHO05D009339 3.0e-42 175.3 125 68.0
Dinv44340 Davidia involucrata HOM05D007336 ORTHO05D009339 4.0e-42 174.9 121 70.2
Actinidia40305 Actinidia chinensis HOM05D007336 ORTHO05D009339 8.8e-42 173.7 121 67.8
TAR362G0973 Trochodendron aralioides HOM05D007336 ORTHO05D009339 2.6e-41 172.2 125 67.2
GSVIVG01031156001 Vitis vinifera HOM05D007336 ORTHO05D009339 2.8e-40 168.7 126 63.5
CSS0001044 Camellia sinensis var. sinensis HOM05D007336 ORTHO05D009339 8.3e-40 167.2 121 66.1
Sc19g0005520 Simmondsia chinensis HOM05D007336 ORTHO05D009339 4.1e-39 164.9 119 67.2
FvH4_6g06960 Fragaria vesca HOM05D007336 ORTHO05D009339 5.4e-39 164.5 126 63.5
RcHm_v2.0_Chr3g0456501 Rosa chinensis HOM05D007336 ORTHO05D009339 5.4e-39 164.5 126 64.3
Cfa006663 Carpinus fangiana HOM05D007336 ORTHO05D009339 7.0e-39 164.1 122 64.8
FAN05G1709 Fragaria x ananassa HOM05D007336 ORTHO05D009339 7.0e-39 164.1 126 63.5
FAN05G3591 Fragaria x ananassa HOM05D007336 ORTHO05D009339 7.0e-39 164.1 126 63.5
EL10Ac3g06656 Beta vulgaris HOM05D007336 ORTHO05D009339 9.1e-39 163.7 121 64.5
Thecc.05G317300 Theobroma cacao HOM05D007336 ORTHO05D009339 1.6e-38 162.9 126 65.1
CAN.G14.12 Capsicum annuum HOM05D007336 ORTHO05D009339 2.0e-38 162.5 113 69.0
Aqoxy2G02873 Aquilegia oxysepala HOM05D007336 ORTHO05D009339 2.7e-38 162.2 123 66.7
Duzib128G0390 Durio zibethinus HOM05D007336 ORTHO05D009339 3.5e-38 161.8 126 63.5
Lsat_1_v5_gn_6_76001 Lactuca sativa HOM05D007336 ORTHO05D009339 4.5e-38 161.4 118 66.1
FAN09G1805 Fragaria x ananassa HOM05D007336 ORTHO05D009339 5.9e-38 161.0 126 62.7
FAN14G5314 Fragaria x ananassa HOM05D007336 ORTHO05D009339 5.9e-38 161.0 126 62.7
Prupe.6G317700 Prunus persica HOM05D007336 ORTHO05D009339 5.9e-38 161.0 123 64.2
MD04G1197300 Malus domestica HOM05D007336 ORTHO05D009339 1.3e-37 159.8 118 65.3
Manes.01G127100 Manihot esculenta HOM05D007336 ORTHO05D009339 1.3e-37 159.8 124 62.9
Nitab4.5_0000306g0320 Nicotiana tabacum HOM05D007336 ORTHO05D009339 1.3e-37 159.8 118 66.1
Atru.chr1.2192 Acer truncatum HOM05D007336 ORTHO05D009339 1.7e-37 159.5 125 63.2
CiPaw.08G158700 Carya illinoinensis HOM05D007336 ORTHO05D009339 1.7e-37 159.5 122 64.8
MELO3C004210.2 Cucumis melo HOM05D007336 ORTHO05D009339 1.7e-37 159.5 127 63.8
Potri.005G021800 Populus trichocarpa HOM05D007336 ORTHO05D009339 1.7e-37 159.5 121 65.3
COL.COLO4_03798 Corchorus olitorius HOM05D007336 ORTHO05D009339 2.3e-37 159.1 126 61.9
CsaV3_2G006800 Cucumis sativus L. HOM05D007336 ORTHO05D009339 2.3e-37 159.1 127 63.8
MD12G1210100 Malus domestica HOM05D007336 ORTHO05D009339 2.9e-37 158.7 117 66.7
PGSC0003DMG400006241 Solanum tuberosum HOM05D007336 ORTHO05D009339 2.9e-37 158.7 113 68.1
AUR62018066 Chenopodium quinoa HOM05D007336 ORTHO05D009339 5.0e-37 157.9 118 65.3
AUR62015269 Chenopodium quinoa HOM05D007336 ORTHO05D009339 6.5e-37 157.5 121 62.8
ClCG02G015210 Citrullus lanatus HOM05D007336 ORTHO05D009339 6.5e-37 157.5 127 62.2
Hund20531 Selenicereus undatus HOM05D007336 ORTHO05D009339 6.5e-37 157.5 118 62.7
Eucgr.H03266 Eucalyptus grandis HOM05D007336 ORTHO05D009339 8.6e-37 157.1 123 61.8
FAN02G4454 Fragaria x ananassa HOM05D007336 ORTHO05D009339 1.1e-36 156.8 136 59.6
Atru.chr1.2191 Acer truncatum HOM05D007336 ORTHO05D009339 1.5e-36 156.4 125 62.4
CANSAT54G2288 Cannabis sativa HOM05D007336 ORTHO05D009339 1.5e-36 156.4 118 64.4
Lalb_Chr16g0391581 Lupinus albus HOM05D007336 ORTHO05D009339 1.5e-36 156.4 126 61.1
Peaxi162Scf00065g01021 Petunia axillaris HOM05D007336 ORTHO05D009339 1.9e-36 156.0 118 65.3
Ciclev10002848m.g Citrus clementina HOM05D007336 ORTHO05D009339 4.2e-36 154.8 126 61.9
Solyc01g065710.3 Solanum lycopersicum HOM05D007336 ORTHO05D009339 4.2e-36 154.8 113 67.3
Sopen01g027110 Solanum pennellii HOM05D007336 ORTHO05D009339 4.2e-36 154.8 113 67.3
Gorai.007G303000 Gossypium raimondii HOM05D007336 ORTHO05D009339 7.2e-36 154.1 126 61.9
Eucgr.H03264 Eucalyptus grandis HOM05D007336 ORTHO05D009339 2.1e-35 152.5 123 60.2
arahy.Tifrunner.gnm1.ann1.N7WCQ3 Arachis hypogaea HOM05D000001 ORTHO05D010781 2.8e-35 152.1 123 65.0
Glyma.19G230700 Glycine max HOM05D007336 ORTHO05D009339 3.6e-35 151.8 122 60.7
Lj1g0024848 Lotus japonicus HOM05D007336 ORTHO05D009339 3.6e-35 151.8 122 59.0
arahy.Tifrunner.gnm1.ann1.63GRQU Arachis hypogaea HOM05D007336 ORTHO05D010781 4.7e-35 151.4 123 65.0
Gohir.D11G280800 Gossypium hirsutum HOM05D007336 ORTHO05D009339 4.7e-35 151.4 126 61.1
Nitab4.5_0002755g0010 Nicotiana tabacum HOM05D007336 ORTHO05D009339 4.7e-35 151.4 135 58.5
THA.LOC104805904 Tarenaya hassleriana HOM05D007336 ORTHO05D009339 4.7e-35 151.4 117 64.1
PGR031G1948 Punica granatum HOM05D007336 ORTHO05D009339 6.1e-35 151.0 121 62.0
DCAR_030493 Daucus carota HOM05D007336 ORTHO05D009339 1.0e-34 150.2 118 60.2
Psat0s3672g0040 Pisum sativum HOM05D007336 ORTHO05D009339 1.0e-34 150.2 122 59.0
CDE02G0601 Ceratophyllum demersum HOM05D007336 ORTHO05D009339 1.4e-34 149.8 122 60.7
Phvul.001G227200 Phaseolus vulgaris HOM05D007336 ORTHO05D009339 2.3e-34 149.1 123 61.0
Haze_04108 Corylus avellana HOM05D002548 ORTHO05D003031 2.6e-33 145.6 160 49.4
AL1G65880 Arabidopsis lyrata HOM05D007336 ORTHO05D009339 5.7e-33 144.4 122 59.8
HPP92_013733 Vanilla planifolia HOM05D007336 ORTHO05D009339 2.8e-32 142.1 118 58.5
Thhalv10023757m.g Eutrema salsugineum HOM05D007336 ORTHO05D009339 3.7e-32 141.7 121 57.9
BcaB04g20156 Brassica carinata HOM05D007336 ORTHO05D009339 1.1e-31 140.2 121 58.7
Aa31LG2G11600 Aethionema arabicum HOM05D007336 ORTHO05D009339 1.4e-31 139.8 121 57.9
CARHR289820 Cardamine hirsuta HOM05D007336 ORTHO05D009339 1.4e-31 139.8 122 59.0
C01p35170 Brassica napus HOM05D007336 ORTHO05D009339 2.4e-31 139.0 123 56.1
BolC1t03475H Brassica oleracea HOM05D007336 ORTHO05D009339 2.4e-31 139.0 123 56.1
unitig_46.g18696 Utricularia gibba HOM05D007336 ORTHO05D009339 2.4e-31 139.0 114 61.4
A01p27330 Brassica napus HOM05D007336 ORTHO05D009339 3.1e-31 138.7 123 56.1
BraA01t02872Z Brassica rapa HOM05D007336 ORTHO05D009339 3.1e-31 138.7 123 56.1
AT1G56260 Arabidopsis thaliana HOM05D007336 ORTHO05D009339 5.4e-31 137.9 123 58.5
Medtr7g112530 Medicago truncatula HOM05D007336 ORTHO05D009339 2.0e-30 136.0 119 55.5
MBI18_g25083_MAGBIO Magnolia biondii HOM05D007336 ORTHO05D009339 3.5e-30 135.2 154 49.4
TPR.G39916 Trifolium pratense HOM05D007336 ORTHO05D009339 3.5e-30 135.2 126 54.8
Sp2g06650 Schrenkiella parvula HOM05D007336 ORTHO05D009339 5.9e-30 134.4 121 55.4
SEGI_32823 Sequoiadendron giganteum HOM05D007336 ORTHO05D009339 1.0e-29 133.7 124 53.2
Zm00001eb300400 Zea mays HOM05D007336 ORTHO05D009339 1.7e-29 132.9 126 56.3
Carub.0002s0790 Capsella rubella HOM05D007336 ORTHO05D009339 2.3e-29 132.5 123 55.3
PSO832G0037 Papaver somniferum HOM05D007336 ORTHO05D009339 2.9e-29 132.1 122 54.1
BcaC09g49567 Brassica carinata HOM05D007336 ORTHO05D009339 1.9e-28 129.4 123 54.5
HanXRQChr13g0413951 Helianthus annuus HOM05D007336 ORTHO05D009339 4.3e-28 128.3 86 69.8
Gohir.A11G270600 Gossypium hirsutum HOM05D007336 ORTHO05D009339 1.6e-27 126.3 107 63.6
QL03p019121 Quercus lobata HOM05D007336 ORTHO05D009339 6.8e-26 120.9 88 62.5
Sed0016582 Sechium edule HOM05D007336 ORTHO05D009339 8.9e-26 120.6 92 62.0
Eucgr.H03263 Eucalyptus grandis HOM05D007336 ORTHO05D009339 1.7e-24 116.3 92 59.8
Oeu031988.1 Olea europaea HOM05D007336 ORTHO05D009339 1.7e-24 116.3 85 67.1
Ah.04g153680 Amaranthus hybridus HOM05D007336 ORTHO05D009339 2.9e-24 115.5 93 60.2
Cpa.g.sc48.123 Carica papaya HOM05D007336 ORTHO05D009339 2.9e-24 115.5 200 38.5
Prupe.2G221300 Prunus persica HOM05D007336 ORTHO05D009339 2.9e-24 115.5 86 61.6
Nn4g25729 Nelumbo nucifera HOM05D007336 ORTHO05D009339 8.3e-24 114.0 86 67.4
Eucgr.H03265 Eucalyptus grandis HOM05D007336 ORTHO05D009339 1.1e-23 113.6 92 58.7
Eucgr.L02901 Eucalyptus grandis HOM05D007336 ORTHO05D009339 1.1e-23 113.6 92 58.7
ATR0693G059 Amborella trichopoda HOM05D007336 ORTHO05D009339 1.9e-23 112.8 85 64.7
AagrBONN_evm.TU.Sc2ySwM_344.3688 Anthoceros agrestis HOM05D007336 ORTHO05D009339 4.1e-23 111.7 117 52.1
VMungo1383G0834 Vigna mungo HOM05D007336 ORTHO05D009339 1.0e-21 107.1 88 55.7
Pp3c22_13440 Physcomitrium patens HOM05D007336 ORTHO05D009339 1.3e-21 106.7 118 44.9
Prupe.3G209800 Prunus persica HOM05D007336 ORTHO05D009339 5.2e-18 94.7 99 51.5
SMO137G0008 Selaginella moellendorffii HOM05D007336 ORTHO05D009339 8.9e-18 94.0 110 50.0
Glyma.03G233600 Glycine max HOM05D007336 ORTHO05D009339 7.5e-17 90.9 82 56.1
Mapoly0064s0018 Marchantia polymorpha HOM05D007336 ORTHO05D009339 6.8e-10 67.8 78 47.4


User provided reference genes

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