Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow2G0599 Salvia bowleyana HOM05D005437 ORTHO05D006699 3.2e-92 341.7 164 100.0
SalBow8G2468 Salvia bowleyana HOM05D005437 ORTHO05D006699 2.4e-87 325.5 157 98.7
SalBow1G2829 Salvia bowleyana HOM05D005437 ORTHO05D006699 7.7e-86 320.5 157 97.5
SalBow8G5394 Salvia bowleyana HOM05D005437 ORTHO05D006699 5.9e-78 294.3 144 98.6
Migut.M01548 Erythranthe guttata HOM05D005437 ORTHO05D006699 9.7e-65 250.4 157 76.4
SGA_v2.0_scaffold186G40210 Striga asiatica HOM05D005437 ORTHO05D006699 4.5e-62 241.5 151 78.1
Oeu036617.1 Olea europaea HOM05D005437 ORTHO05D006699 3.2e-60 235.3 163 71.8
unitig_748.g7633 Utricularia gibba HOM05D005437 ORTHO05D006699 1.4e-58 229.9 144 73.6
Ca_19805_v3 Cicer arietinum L. HOM05D005437 ORTHO05D006699 3.7e-56 221.9 163 67.5
TPR.G34170 Trifolium pratense HOM05D005437 ORTHO05D006699 1.1e-55 220.3 163 66.9
Dinv19612 Davidia involucrata HOM05D005437 ORTHO05D006699 2.4e-55 219.2 158 68.4
MD05G1221200 Malus domestica HOM05D005437 ORTHO05D006699 4.1e-55 218.4 158 69.0
Medtr4g030930 Medicago truncatula HOM05D005437 ORTHO05D006699 7.0e-55 217.6 163 66.3
Glyma.09G002300 Glycine max HOM05D005437 ORTHO05D006699 1.6e-54 216.5 159 67.9
Psat7g228480 Pisum sativum HOM05D005437 ORTHO05D006699 1.6e-54 216.5 163 65.6
FAN16G0636 Fragaria x ananassa HOM05D005437 ORTHO05D006699 4.5e-54 214.9 158 67.7
FAN21G1213 Fragaria x ananassa HOM05D005437 ORTHO05D006699 4.5e-54 214.9 158 67.7
FAN25G2633 Fragaria x ananassa HOM05D005437 ORTHO05D006699 4.5e-54 214.9 158 67.7
Hma1.2p1_0637F.1_g193450 Hydrangea macrophylla HOM05D005437 ORTHO05D006699 4.5e-54 214.9 158 66.5
FvH4_3g15600 Fragaria vesca HOM05D005437 ORTHO05D006699 5.9e-54 214.5 158 67.7
FAN11G3430 Fragaria x ananassa HOM05D005437 ORTHO05D006699 5.9e-54 214.5 158 67.7
Gorai.002G036800 Gossypium raimondii HOM05D005437 ORTHO05D006699 5.9e-54 214.5 156 66.0
Potri.007G066400 Populus trichocarpa HOM05D005437 ORTHO05D006699 5.9e-54 214.5 158 65.2
QL04p076801 Quercus lobata HOM05D005437 ORTHO05D006699 5.9e-54 214.5 158 66.5
Gohir.D01G027500 Gossypium hirsutum HOM05D005437 ORTHO05D006699 7.7e-54 214.2 156 66.0
Prupe.4G138400 Prunus persica HOM05D005437 ORTHO05D006699 7.7e-54 214.2 158 68.4
HanXRQChr11g0335011 Helianthus annuus HOM05D005437 ORTHO05D006699 1.0e-53 213.8 158 66.5
Actinidia12783 Actinidia chinensis HOM05D005437 ORTHO05D006699 1.3e-53 213.4 158 66.5
CSS0042223 Camellia sinensis var. sinensis HOM05D005437 ORTHO05D006699 1.7e-53 213.0 158 65.2
Lalb_Chr01g0008201 Lupinus albus HOM05D005437 ORTHO05D006699 1.7e-53 213.0 164 65.9
Rhsim06G0239800 Rhododendron simsii HOM05D005437 ORTHO05D006699 1.7e-53 213.0 158 63.9
vmacro11674 Vaccinium macrocarpon HOM05D005437 ORTHO05D006699 2.3e-53 212.6 165 62.4
CANSAT80G2640 Cannabis sativa HOM05D005437 ORTHO05D006699 3.8e-53 211.8 165 66.7
VMungo1127G0204 Vigna mungo HOM05D005437 ORTHO05D006699 3.8e-53 211.8 159 67.3
Cc05_g16200 Coffea canephora HOM05D005437 ORTHO05D006699 5.0e-53 211.5 163 67.5
DCAR_009644 Daucus carota HOM05D005437 ORTHO05D006699 5.0e-53 211.5 158 66.5
Phvul.011G216100 Phaseolus vulgaris HOM05D005437 ORTHO05D006699 8.6e-53 210.7 159 66.0
arahy.Tifrunner.gnm1.ann1.49XUJ3 Arachis hypogaea HOM05D005437 ORTHO05D006699 1.1e-52 210.3 159 67.3
arahy.Tifrunner.gnm1.ann1.K3W397 Arachis hypogaea HOM05D005437 ORTHO05D006699 1.9e-52 209.5 159 67.3
RcHm_v2.0_Chr5g0026221 Rosa chinensis HOM05D005437 ORTHO05D006699 1.9e-52 209.5 158 67.1
Gohir.A01G039700 Gossypium hirsutum HOM05D005437 ORTHO05D006699 2.5e-52 209.1 156 64.7
Ciclev10004324m.g Citrus clementina HOM05D005437 ORTHO05D006699 3.3e-52 208.8 158 64.6
Peaxi162Scf00452g00721 Petunia axillaris HOM05D005437 ORTHO05D006699 5.5e-52 208.0 158 64.6
Sabra07G0053300 Salix brachista HOM05D005437 ORTHO05D006699 5.5e-52 208.0 155 64.5
Atru.chr1.169 Acer truncatum HOM05D005437 ORTHO05D006699 7.2e-52 207.6 158 63.9
Atru.chr1.178 Acer truncatum HOM05D005437 ORTHO05D006699 7.2e-52 207.6 158 63.9
Lj3g0019331 Lotus japonicus HOM05D005437 ORTHO05D006699 7.2e-52 207.6 164 65.2
CiPaw.11G065200 Carya illinoinensis HOM05D005437 ORTHO05D006699 9.5e-52 207.2 163 66.9
Thecc.07G149800 Theobroma cacao HOM05D005437 ORTHO05D006699 1.6e-51 206.5 158 63.3
COL.COLO4_36739 Corchorus olitorius HOM05D005437 ORTHO05D006699 2.8e-51 205.7 156 63.5
PGSC0003DMG400022125 Solanum tuberosum HOM05D005437 ORTHO05D006699 3.6e-51 205.3 163 62.6
Manes.06G173000 Manihot esculenta HOM05D005437 ORTHO05D006699 4.7e-51 204.9 168 61.3
PSO675G2460 Papaver somniferum HOM05D005437 ORTHO05D006699 4.7e-51 204.9 158 60.8
GSVIVG01020355001 Vitis vinifera HOM05D005437 ORTHO05D006699 8.0e-51 204.1 158 64.6
CAN.G943.42 Capsicum annuum HOM05D005437 ORTHO05D006699 1.4e-50 203.4 158 62.0
Sed0015468 Sechium edule HOM05D005437 ORTHO05D006699 1.4e-50 203.4 158 62.7
Sc20g0003070 Simmondsia chinensis HOM05D005437 ORTHO05D006699 1.4e-50 203.4 163 62.6
MELO3C019659.2 Cucumis melo HOM05D005437 ORTHO05D006699 2.3e-50 202.6 158 63.3
ECA236G0150 Erigeron canadensis HOM05D005437 ORTHO05D006699 3.0e-50 202.2 158 62.7
CsaV3_6G013680 Cucumis sativus L. HOM05D005437 ORTHO05D006699 4.0e-50 201.8 158 63.3
Duzib213G0844 Durio zibethinus HOM05D005437 ORTHO05D006699 6.8e-50 201.1 158 61.4
HPP92_026356 Vanilla planifolia HOM05D005437 ORTHO05D006699 1.5e-49 199.9 158 61.4
Carub.0001s1630 Capsella rubella HOM05D005437 ORTHO05D006699 3.4e-49 198.7 157 63.7
AL1G28710 Arabidopsis lyrata HOM05D005437 ORTHO05D006699 5.7e-49 198.0 157 65.0
AT1G16540 Arabidopsis thaliana HOM05D005437 ORTHO05D006699 5.7e-49 198.0 157 63.7
AUR62011473 Chenopodium quinoa HOM05D005437 ORTHO05D006699 5.7e-49 198.0 158 60.8
THA.LOC104812356 Tarenaya hassleriana HOM05D005437 ORTHO05D006699 1.3e-48 196.8 157 63.7
TAR626G0611 Trochodendron aralioides HOM05D005437 ORTHO05D006699 1.3e-48 196.8 158 60.8
Lsat_1_v5_gn_7_111601 Lactuca sativa HOM05D005437 ORTHO05D006699 1.7e-48 196.4 149 64.4
Sp1g14710 Schrenkiella parvula HOM05D005437 ORTHO05D006699 2.2e-48 196.1 157 63.1
Thhalv10006808m.g Eutrema salsugineum HOM05D005437 ORTHO05D006699 2.8e-48 195.7 157 62.4
Solyc07g066480.3 Solanum lycopersicum HOM05D005437 ORTHO05D006699 2.8e-48 195.7 163 58.9
Aqoxy1G01551_Aqoxy1G01552 Aquilegia oxysepala HOM05D005437 ORTHO05D006699 3.7e-48 195.3 158 60.8
Nn7g37998 Nelumbo nucifera HOM05D005437 ORTHO05D006699 3.7e-48 195.3 158 60.8
ATR0763G170 Amborella trichopoda HOM05D005437 ORTHO05D006699 4.9e-48 194.9 155 62.6
PGR102G1747 Punica granatum HOM05D005437 ORTHO05D006699 4.9e-48 194.9 158 62.7
A06p12540 Brassica napus HOM05D005437 ORTHO05D006699 8.3e-48 194.1 157 62.4
BraA06t24417Z Brassica rapa HOM05D005437 ORTHO05D006699 8.3e-48 194.1 157 62.4
Sopen07g034660 Solanum pennellii HOM05D005437 ORTHO05D006699 2.4e-47 192.6 156 59.0
C05p14850 Brassica napus HOM05D005437 ORTHO05D006699 4.1e-47 191.8 157 61.1
BolC5t30200H Brassica oleracea HOM05D005437 ORTHO05D006699 9.2e-47 190.7 157 60.5
Eucgr.F01464 Eucalyptus grandis HOM05D005437 ORTHO05D006699 1.2e-46 190.3 158 62.0
Nitab4.5_0002321g0070 Nicotiana tabacum HOM05D005437 ORTHO05D006699 1.2e-46 190.3 185 53.5
TWI39G0192 Tripterygium wilfordii HOM05D005437 ORTHO05D006699 1.2e-46 190.3 158 60.1
AUR62016581 Chenopodium quinoa HOM05D005437 ORTHO05D006699 2.0e-46 189.5 180 53.3
Zm00001eb274240 Zea mays HOM05D005437 ORTHO05D006699 2.7e-46 189.1 173 56.1
Nitab4.5_0001080g0010 Nicotiana tabacum HOM05D005437 ORTHO05D006699 7.8e-46 187.6 185 53.0
Zm00001eb389990 Zea mays HOM05D005437 ORTHO05D006699 7.8e-46 187.6 158 59.5
EL10Ac9g21866 Beta vulgaris HOM05D005437 ORTHO05D006699 1.3e-45 186.8 158 60.1
Aa31LG7G1090 Aethionema arabicum HOM05D005437 ORTHO05D006699 1.7e-45 186.4 195 53.8
AagrBONN_evm.TU.Sc2ySwM_344.1621 Anthoceros agrestis HOM05D005437 ORTHO05D006699 1.7e-45 186.4 161 55.9
CDE02G3212 Ceratophyllum demersum HOM05D005437 ORTHO05D006699 1.7e-45 186.4 164 58.5
Os06g0670000 Oryza sativa ssp. japonica HOM05D005437 ORTHO05D006699 8.6e-45 184.1 163 57.7
Mapoly0055s0057 Marchantia polymorpha HOM05D005437 ORTHO05D006699 2.3e-42 176.0 159 56.6
SMO144G0105 Selaginella moellendorffii HOM05D005437 ORTHO05D006699 5.2e-42 174.9 157 55.4
SEGI_23870 Sequoiadendron giganteum HOM05D005437 ORTHO05D006699 1.1e-39 167.2 160 53.8
CBR_g6363 Chara braunii HOM05D005437 ORTHO05D006699 7.0e-39 164.5 162 53.7
Pp3c5_23340 Physcomitrium patens HOM05D005437 ORTHO05D006699 9.2e-39 164.1 156 49.4
Lj8A189G30 Lonicera japonica HOM05D005437 ORTHO05D006699 1.4e-34 150.2 93 75.3
CARHR017020 Cardamine hirsuta HOM05D005437 ORTHO05D006699 8.3e-32 141.0 94 71.3
BcaC05g25518 Brassica carinata HOM05D005437 ORTHO05D006699 3.2e-31 139.0 110 62.7
AL6G51080 Arabidopsis lyrata HOM05D005437 ORTHO05D006699 6.0e-30 134.8 138 52.9
SalBow7G4855 Salvia bowleyana HOM05D003004 ORTHO05D031533 1.9e-28 129.8 65 95.4
MCO10G344 Micromonas commoda HOM05D005437 ORTHO05D006699 2.5e-20 102.8 151 41.1
Cre03.g152000 Chlamydomonas reinhardtii HOM05D005437 ORTHO05D006699 2.0e-17 93.2 105 46.7
SalBow1G8353 Salvia bowleyana HOM05D000997 ORTHO05D350362 3.4e-17 92.4 42 100.0
SalBow1G8669 Salvia bowleyana HOM05D000997 ORTHO05D000828 3.4e-17 92.4 42 100.0
SHI21421 Sapria himalayana HOM05D005377 ORTHO05D003034 4.4e-17 92.0 52 80.8
Cre02.g142351 Chlamydomonas reinhardtii HOM05D005437 ORTHO05D006699 9.9e-17 90.9 149 34.9
Duzib268G1426 Durio zibethinus HOM05D005437 ORTHO05D006699 3.2e-15 85.9 53 73.6
Cpa.g.sc67.56 Carica papaya HOM05D005437 ORTHO05D006699 7.8e-14 81.3 53 69.8
SHI21422 Sapria himalayana HOM05D005437 ORTHO05D006699 1.1e-12 77.4 58 67.2
PSO675G0724 Papaver somniferum HOM05D005437 ORTHO05D006699 1.5e-09 67.0 48 62.5
Pp3c6_25910 Physcomitrium patens HOM05D001123 ORTHO05D000966 9.9e-09 64.3 156 27.6
PRCOL_00000624 Prasinoderma coloniale HOM05D005437 ORTHO05D006699 2.2e-08 63.2 98 36.7
Pp3c16_23490 Physcomitrium patens HOM05D001123 ORTHO05D000966 2.9e-08 62.8 148 27.7
Pp3c12_9330 Physcomitrium patens HOM05D001123 ORTHO05D000966 1.4e-07 60.5 95 30.5
Atru.chr1.140 Acer truncatum HOM05D005437 ORTHO05D003034 3.2e-07 59.3 37 75.7
Pp3c15_23580 Physcomitrium patens HOM05D001123 ORTHO05D000966 3.2e-07 59.3 149 28.9
Cfa026809 Carpinus fangiana HOM05D005437 ORTHO05D006699 1.6e-06 57.0 147 32.7
Gohir.A06G015100 Gossypium hirsutum HOM05D001123 ORTHO05D000966 2.1e-06 56.6 103 34.0
Gohir.D06G013200 Gossypium hirsutum HOM05D001123 ORTHO05D000966 2.1e-06 56.6 103 34.0
Gorai.010G015800 Gossypium raimondii HOM05D001123 ORTHO05D000966 2.1e-06 56.6 103 34.0
Pp3c25_10130 Physcomitrium patens HOM05D001123 ORTHO05D000966 2.7e-06 56.2 149 26.2
Pp3c4_21550 Physcomitrium patens HOM05D001123 ORTHO05D000966 2.7e-06 56.2 153 26.8
COL.COLO4_26427 Corchorus olitorius HOM05D001123 ORTHO05D000966 4.6e-06 55.5 103 34.0
Dinv39909 Davidia involucrata HOM05D001123 ORTHO05D000966 4.6e-06 55.5 98 33.7
Thecc.08G016700 Theobroma cacao HOM05D001123 ORTHO05D000966 4.6e-06 55.5 103 34.0
Duzib093G0727 Durio zibethinus HOM05D001123 ORTHO05D000966 7.8e-06 54.7 103 33.0


User provided reference genes

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