Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow2G0434 Salvia bowleyana HOM05D007991 ORTHO05D010158 1.3e-48 196.1 99 100.0
Nn7g37867 Nelumbo nucifera HOM05D007991 ORTHO05D010158 3.0e-16 88.6 79 59.5
ECA236G0423 Erigeron canadensis HOM05D007991 ORTHO05D010158 5.6e-15 84.3 61 72.1
HanXRQChr11g0334671 Helianthus annuus HOM05D007991 ORTHO05D010158 1.2e-14 83.2 61 72.1
Lsat_1_v5_gn_7_112301 Lactuca sativa HOM05D007991 ORTHO05D010158 1.6e-14 82.8 55 76.4
Medtr2g069650 Medicago truncatula HOM05D007991 ORTHO05D010158 3.6e-14 81.6 78 61.5
Psat1g011440 Pisum sativum HOM05D007991 ORTHO05D010158 6.2e-14 80.9 53 73.6
GSVIVG01012568001 Vitis vinifera HOM05D007991 ORTHO05D010158 8.1e-14 80.5 56 73.2
GSVIVG01035227001 Vitis vinifera HOM05D007991 ORTHO05D010158 8.1e-14 80.5 56 73.2
CsaV3_4G031820 Cucumis sativus L. HOM05D005971 ORTHO05D007459 1.1e-13 80.1 78 61.5
Manes.06G170901 Manihot esculenta HOM05D007991 ORTHO05D010158 1.4e-13 79.7 73 58.9
Cpa.g.sc10.36 Carica papaya HOM05D007991 ORTHO05D010158 1.8e-13 79.3 73 63.0
TPR.G9765 Trifolium pratense HOM05D007991 ORTHO05D010158 1.8e-13 79.3 68 60.3
Atru.chr8.1056 Acer truncatum HOM05D007991 ORTHO05D010158 2.3e-13 79.0 54 75.9
Manes.06G170500 Manihot esculenta HOM05D007991 ORTHO05D010158 3.1e-13 78.6 73 57.5
unitig_8.g4768 Utricularia gibba HOM05D007991 ORTHO05D010158 4.0e-13 78.2 55 74.5
RcHm_v2.0_Chr5g0026701 Rosa chinensis HOM05D007991 ORTHO05D010158 5.2e-13 77.8 75 57.3
Aqoxy6G00820 Aquilegia oxysepala HOM05D007991 ORTHO05D010158 6.8e-13 77.4 62 66.1
CAN.G943.33 Capsicum annuum HOM05D007991 ORTHO05D010158 8.9e-13 77.0 55 65.5
ClCG11G016360 Citrullus lanatus HOM05D007991 ORTHO05D010158 1.2e-12 76.6 68 63.2
ClCG11G016370 Citrullus lanatus HOM05D007991 ORTHO05D010158 1.2e-12 76.6 68 63.2
Ciclev10023629m.g Citrus clementina HOM05D007991 ORTHO05D010158 1.2e-12 76.6 55 69.1
Ah.07g206310 Amaranthus hybridus HOM05D007991 ORTHO05D010158 1.5e-12 76.3 58 62.1
FAN11G2864 Fragaria x ananassa HOM05D007991 ORTHO05D010158 2.0e-12 75.9 69 59.4
FAN21G1902 Fragaria x ananassa HOM05D007991 ORTHO05D010158 2.0e-12 75.9 69 59.4
Ca_03685_v3 Cicer arietinum L. HOM05D007991 ORTHO05D010158 2.6e-12 75.5 72 61.1
MBI02_g12653_MAGBIO Magnolia biondii HOM05D007991 ORTHO05D010158 2.6e-12 75.5 78 52.6
Prupe.4G140900 Prunus persica HOM05D007991 ORTHO05D010158 2.6e-12 75.5 52 71.2
Sc16g0005380 Simmondsia chinensis HOM05D007991 ORTHO05D010158 3.4e-12 75.1 52 67.3
MELO3C010561.2 Cucumis melo HOM05D007991 ORTHO05D010158 4.4e-12 74.7 78 57.7
Gohir.A11G002600 Gossypium hirsutum HOM05D007991 ORTHO05D010158 4.4e-12 74.7 54 70.4
Solyc07g066400.1 Solanum lycopersicum HOM05D007991 ORTHO05D010158 4.4e-12 74.7 55 65.5
FAN16G1552 Fragaria x ananassa HOM05D007991 ORTHO05D010158 5.8e-12 74.3 69 58.0
Phvul.005G056100 Phaseolus vulgaris HOM05D007991 ORTHO05D010158 5.8e-12 74.3 75 50.7
TWI39G0184 Tripterygium wilfordii HOM05D007991 ORTHO05D010158 5.8e-12 74.3 60 65.0
Gorai.007G003200 Gossypium raimondii HOM05D007991 ORTHO05D010158 7.5e-12 73.9 54 70.4
PGR042G3415 Punica granatum HOM05D007991 ORTHO05D010158 7.5e-12 73.9 60 63.3
PGSC0003DMG400022239 Solanum tuberosum HOM05D007991 ORTHO05D010158 7.5e-12 73.9 55 65.5
CiPaw.04G012700 Carya illinoinensis HOM05D007991 ORTHO05D010158 9.9e-12 73.6 68 57.4
AT3G12960 Arabidopsis thaliana HOM05D007991 ORTHO05D010158 2.2e-11 72.4 59 61.0
FAN25G2658 Fragaria x ananassa HOM05D007991 ORTHO05D010158 2.2e-11 72.4 69 56.5
QL04p074011 Quercus lobata HOM05D007991 ORTHO05D010158 2.2e-11 72.4 83 51.8
Sopen07g034570 Solanum pennellii HOM05D007991 ORTHO05D010158 2.2e-11 72.4 55 65.5
AL3G24640 Arabidopsis lyrata HOM05D007991 ORTHO05D010158 2.9e-11 72.0 52 67.3
Carub.0003s1230 Capsella rubella HOM05D007991 ORTHO05D010158 2.9e-11 72.0 71 54.9
MD05G1219200 Malus domestica HOM05D007991 ORTHO05D010158 2.9e-11 72.0 80 48.8
Lalb_Chr19g0133391 Lupinus albus HOM05D007991 ORTHO05D010158 4.9e-11 71.2 77 51.9
Peaxi162Scf00452g00812 Petunia axillaris HOM05D007991 ORTHO05D010158 4.9e-11 71.2 55 61.8
CSS0001388 Camellia sinensis var. sinensis HOM05D007991 ORTHO05D010158 6.4e-11 70.9 56 66.1
Gohir.D11G002200 Gossypium hirsutum HOM05D007991 ORTHO05D010158 6.4e-11 70.9 54 66.7
EL10Ac4g08566 Beta vulgaris HOM05D007991 ORTHO05D010158 1.1e-10 70.1 78 52.6
Lj3g0014492 Lotus japonicus HOM05D007991 ORTHO05D010158 1.1e-10 70.1 53 64.2
Thhalv10022193m.g Eutrema salsugineum HOM05D007991 ORTHO05D010158 1.9e-10 69.3 68 55.9
Lalb_Chr03g0031611 Lupinus albus HOM05D007991 ORTHO05D010158 1.9e-10 69.3 52 63.5
Aa31LG8G190 Aethionema arabicum HOM05D007991 ORTHO05D010158 3.2e-10 68.6 77 50.6
Cfa019429 Carpinus fangiana HOM05D007991 ORTHO05D010158 3.2e-10 68.6 49 69.4
BcaC09g48284 Brassica carinata HOM05D007991 ORTHO05D010158 4.1e-10 68.2 59 61.0
C01p52180 Brassica napus HOM05D007991 ORTHO05D010158 4.1e-10 68.2 59 61.0
BolC1t05158H Brassica oleracea HOM05D007991 ORTHO05D010158 4.1e-10 68.2 59 61.0
BraA01t04089Z Brassica rapa HOM05D007991 ORTHO05D010158 4.1e-10 68.2 59 61.0
Nn4g23994 Nelumbo nucifera HOM05D007991 ORTHO05D010158 5.4e-10 67.8 75 57.3
PSO675G0275 Papaver somniferum HOM05D007991 ORTHO05D010158 5.4e-10 67.8 73 50.7
COL.COLO4_04148 Corchorus olitorius HOM05D007991 ORTHO05D010158 9.2e-10 67.0 53 62.3
COL.COLO4_28875 Corchorus olitorius HOM05D007991 ORTHO05D010158 9.2e-10 67.0 80 47.5
BcaB04g21024 Brassica carinata HOM05D007991 ORTHO05D010158 1.6e-09 66.2 62 56.5
CSS0033446 Camellia sinensis var. sinensis HOM05D007991 ORTHO05D010158 1.6e-09 66.2 55 61.8
CARHR087490 Cardamine hirsuta HOM05D007991 ORTHO05D010158 1.6e-09 66.2 76 55.3
Glyma.08G172800 Glycine max HOM05D007991 ORTHO05D010158 1.6e-09 66.2 76 50.0
Sed0025657 Sechium edule HOM05D007991 ORTHO05D010158 3.5e-09 65.1 68 55.9
CANSAT80G1088 Cannabis sativa HOM05D007991 ORTHO05D010158 1.0e-08 63.5 79 45.6
Sp3g11110 Schrenkiella parvula HOM05D007991 ORTHO05D010158 1.0e-08 63.5 62 56.5
Duzib205G1447 Durio zibethinus HOM05D007991 ORTHO05D010158 2.3e-08 62.4 77 44.2
Os08g0104400 Oryza sativa ssp. japonica HOM05D007991 ORTHO05D010158 3.0e-08 62.0 59 52.5
Nitab4.5_0008437g0010 Nicotiana tabacum HOM05D007991 ORTHO05D010158 1.5e-07 59.7 76 44.7
MD05G1300500 Malus domestica HOM05D007991 ORTHO05D010158 1.2e-06 56.6 47 63.8
Zm00001eb260130 Zea mays HOM05D007991 ORTHO05D010158 1.6e-06 56.2 68 47.1


User provided reference genes

Program Settings