Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow2G0364 Salvia bowleyana HOM05D000454 ORTHO05D007581 9.6e-51 204.5 257 100.0
Migut.E00479 Erythranthe guttata HOM05D000454 ORTHO05D007581 9.7e-35 151.4 120 61.7
Oeu023862.1 Olea europaea HOM05D000454 ORTHO05D007581 4.8e-34 149.1 120 64.2
Cc11_g07180 Coffea canephora HOM05D000454 ORTHO05D007581 8.2e-34 148.3 120 60.8
MSTRG.13625 Avicennia marina HOM05D000454 ORTHO05D007581 2.4e-33 146.7 120 60.8
Hma1.2p1_0705F.1_g206970 Hydrangea macrophylla HOM05D000454 ORTHO05D007581 2.0e-32 143.7 124 60.5
SGA_v2.0_scaffold23G10220 Striga asiatica HOM05D000454 ORTHO05D007581 3.4e-32 142.9 120 60.0
Dinv07732 Davidia involucrata HOM05D000454 ORTHO05D007581 7.6e-32 141.7 123 60.2
vmacro10691 Vaccinium macrocarpon HOM05D000454 ORTHO05D007581 1.1e-30 137.9 127 57.5
Actinidia12393 Actinidia chinensis HOM05D000454 ORTHO05D007581 2.5e-30 136.7 124 58.1
Lj6A738T64 Lonicera japonica HOM05D000454 ORTHO05D007581 4.2e-30 136.0 118 56.8
CSS0019353 Camellia sinensis var. sinensis HOM05D000454 ORTHO05D007581 7.2e-30 135.2 118 58.5
Solyc01g005340.3 Solanum lycopersicum HOM05D000454 ORTHO05D007581 7.9e-29 131.7 120 56.7
Sopen01g001360 Solanum pennellii HOM05D000454 ORTHO05D007581 7.9e-29 131.7 120 56.7
PGSC0003DMG400019975 Solanum tuberosum HOM05D000454 ORTHO05D007581 7.9e-29 131.7 120 56.7
Nitab4.5_0000198g0170 Nicotiana tabacum HOM05D000454 ORTHO05D007581 1.0e-28 131.3 121 55.4
Atru.chr11.929 Acer truncatum HOM05D000454 ORTHO05D007581 2.3e-28 130.2 122 54.9
Actinidia36628 Actinidia chinensis HOM05D000454 ORTHO05D007581 3.0e-28 129.8 124 54.8
Lsat_1_v5_gn_8_46240 Lactuca sativa HOM05D000454 ORTHO05D007581 3.9e-28 129.4 121 56.2
Nitab4.5_0005571g0020 Nicotiana tabacum HOM05D000454 ORTHO05D007581 6.7e-28 128.6 130 51.5
unitig_699.g19263 Utricularia gibba HOM05D000454 ORTHO05D007572 8.7e-28 128.3 119 54.6
Ciclev10014855m.g Citrus clementina HOM05D000454 ORTHO05D007581 1.1e-27 127.9 129 55.8
CiPaw.06G051600 Carya illinoinensis HOM05D000454 ORTHO05D007581 1.9e-27 127.1 127 54.3
Sabra10G0078000 Salix brachista HOM05D000454 ORTHO05D007581 3.3e-27 126.3 116 54.3
RcHm_v2.0_Chr4g0443091 Rosa chinensis HOM05D000454 ORTHO05D007581 4.3e-27 125.9 128 53.1
Manes.15G134000 Manihot esculenta HOM05D000454 ORTHO05D007581 5.7e-27 125.6 128 54.7
FAN17G1531 Fragaria x ananassa HOM05D000454 ORTHO05D007581 7.4e-27 125.2 129 51.2
TAR629G1112 Trochodendron aralioides HOM05D000454 ORTHO05D007581 7.4e-27 125.2 125 53.6
BcaC06g31284 Brassica carinata HOM05D000454 ORTHO05D007581 9.7e-27 124.8 130 49.2
CiPaw.05G189300 Carya illinoinensis HOM05D000454 ORTHO05D007581 9.7e-27 124.8 127 52.8
FAN07G1725 Fragaria x ananassa HOM05D000454 ORTHO05D007581 1.1e-25 121.3 128 49.2
Carub.0005s0063 Capsella rubella HOM05D000454 ORTHO05D007581 1.4e-25 120.9 131 48.1
Sp2g13140 Schrenkiella parvula HOM05D000454 ORTHO05D007581 1.8e-25 120.6 131 48.1
A06p44180 Brassica napus HOM05D000454 ORTHO05D007581 2.4e-25 120.2 130 48.5
SHI04319 Sapria himalayana HOM05D000454 ORTHO05D007581 2.4e-25 120.2 137 48.9
FAN12G2722 Fragaria x ananassa HOM05D000454 ORTHO05D007581 3.1e-25 119.8 129 48.1
TWI74G0370 Tripterygium wilfordii HOM05D000454 ORTHO05D007581 3.1e-25 119.8 130 49.2
BcaC06g34134 Brassica carinata HOM05D000454 ORTHO05D007581 4.1e-25 119.4 130 48.5
C07p32320 Brassica napus HOM05D000454 ORTHO05D007581 4.1e-25 119.4 130 48.5
BolC7t43768H Brassica oleracea HOM05D000454 ORTHO05D007581 4.1e-25 119.4 130 48.5
Thhalv10003970m.g Eutrema salsugineum HOM05D000454 ORTHO05D007581 4.1e-25 119.4 130 47.7
FvH4_4g33630 Fragaria vesca HOM05D000454 ORTHO05D007581 4.1e-25 119.4 130 47.7
AL5G10780 Arabidopsis lyrata HOM05D000454 ORTHO05D007581 5.3e-25 119.0 130 48.5
Sc14g0006840 Simmondsia chinensis HOM05D000454 ORTHO05D007581 5.3e-25 119.0 128 48.4
Prupe.1G333000 Prunus persica HOM05D000454 ORTHO05D007581 6.9e-25 118.6 127 49.6
Thecc.02G292200 Theobroma cacao HOM05D000454 ORTHO05D007581 6.9e-25 118.6 128 51.6
Cfa015022 Carpinus fangiana HOM05D000454 ORTHO05D007581 9.1e-25 118.2 127 49.6
HanXRQChr08g0212481 Helianthus annuus HOM05D000454 ORTHO05D007581 1.2e-24 117.9 118 49.2
Aa31LG2G8210 Aethionema arabicum HOM05D000454 ORTHO05D007581 2.0e-24 117.1 130 46.9
TAR371G0605 Trochodendron aralioides HOM05D000454 ORTHO05D007581 2.0e-24 117.1 127 51.2
Lj2g0022141 Lotus japonicus HOM05D000454 ORTHO05D007581 2.6e-24 116.7 128 50.0
PGR142G1825 Punica granatum HOM05D000454 ORTHO05D007581 3.4e-24 116.3 141 47.5
ClCG01G006560 Citrullus lanatus HOM05D000454 ORTHO05D007581 4.5e-24 115.9 127 48.8
MD13G1020700 Malus domestica HOM05D000454 ORTHO05D007581 5.9e-24 115.5 128 48.4
THA.LOC104805939 Tarenaya hassleriana HOM05D000454 ORTHO05D007581 5.9e-24 115.5 138 45.7
CARHR144250 Cardamine hirsuta HOM05D000454 ORTHO05D007581 7.7e-24 115.2 131 45.0
MD16G1019100 Malus domestica HOM05D000454 ORTHO05D007581 7.7e-24 115.2 128 48.4
CANSAT01G3250 Cannabis sativa HOM05D000454 ORTHO05D007581 1.7e-23 114.0 124 49.2
Potri.008G134500 Populus trichocarpa HOM05D000454 ORTHO05D007581 1.7e-23 114.0 113 50.4
AT2G01680 Arabidopsis thaliana HOM05D000454 ORTHO05D007581 2.2e-23 113.6 130 46.9
Sed0010096 Sechium edule HOM05D000454 ORTHO05D007581 2.2e-23 113.6 128 46.9
Cpa.g.sc2.198 Carica papaya HOM05D000454 ORTHO05D007581 2.9e-23 113.2 129 48.1
Haze_10883 Corylus avellana HOM05D000454 ORTHO05D007581 3.8e-23 112.8 127 48.8
MELO3C005252.2 Cucumis melo HOM05D000454 ORTHO05D007581 6.5e-23 112.1 125 48.0
Gorai.012G182300 Gossypium raimondii HOM05D000454 ORTHO05D007581 6.5e-23 112.1 129 48.1
PSO478G0178 Papaver somniferum HOM05D000454 ORTHO05D007581 8.5e-23 111.7 118 45.8
BraA06t27293Z Brassica rapa HOM05D000454 ORTHO05D007581 1.4e-22 110.9 126 46.0
QL03p035752 Quercus lobata HOM05D000454 ORTHO05D007581 1.4e-22 110.9 125 49.6
DCAR_030269 Daucus carota HOM05D000454 ORTHO05D007581 1.9e-22 110.5 126 49.2
Gohir.A04G142600 Gossypium hirsutum HOM05D000454 ORTHO05D007581 1.9e-22 110.5 128 46.9
HanXRQChr12g0363241 Helianthus annuus HOM05D000454 ORTHO05D007581 1.9e-22 110.5 124 48.4
Sed0012819 Sechium edule HOM05D000454 ORTHO05D007581 1.9e-22 110.5 125 47.2
Duzib251G0534 Durio zibethinus HOM05D000454 ORTHO05D007581 4.2e-22 109.4 123 49.6
Duzib268G0441 Durio zibethinus HOM05D000454 ORTHO05D007581 7.2e-22 108.6 124 49.2
Eucgr.G02108 Eucalyptus grandis HOM05D000454 ORTHO05D007581 9.4e-22 108.2 149 41.6
PSO017G5753 Papaver somniferum HOM05D000454 ORTHO05D007581 9.4e-22 108.2 118 44.9
Lalb_Chr10g0095741 Lupinus albus HOM05D000454 ORTHO05D007581 1.2e-21 107.8 127 45.7
DCAR_032282 Daucus carota HOM05D000454 ORTHO05D007581 1.6e-21 107.5 123 46.3
Nn4g24360 Nelumbo nucifera HOM05D000454 ORTHO05D007581 2.1e-21 107.1 124 47.6
TPR.G36927 Trifolium pratense HOM05D000454 ORTHO05D007581 3.6e-21 106.3 131 45.8
CsaV3_5G028170 Cucumis sativus L. HOM05D000454 ORTHO05D007581 4.6e-21 105.9 124 46.0
Phvul.003G019500 Phaseolus vulgaris HOM05D000454 ORTHO05D007581 6.1e-21 105.5 119 46.2
Medtr8g105260 Medicago truncatula HOM05D000454 ORTHO05D007581 7.9e-21 105.1 135 42.2
arahy.Tifrunner.gnm1.ann1.N2JTHJ Arachis hypogaea HOM05D000454 ORTHO05D007581 1.4e-20 104.4 125 45.6
Glyma.02G084900 Glycine max HOM05D000454 ORTHO05D007581 1.4e-20 104.4 116 45.7
Gohir.D01G140175 Gossypium hirsutum HOM05D000454 ORTHO05D036153 1.4e-20 104.4 128 42.2
Phvul.002G321000 Phaseolus vulgaris HOM05D000454 ORTHO05D007581 1.8e-20 104.0 122 43.4
Lalb_Chr16g0387541 Lupinus albus HOM05D000454 ORTHO05D007581 2.3e-20 103.6 120 45.0
Medtr1g032100 Medicago truncatula HOM05D000454 ORTHO05D007581 6.7e-20 102.1 123 45.5
arahy.Tifrunner.gnm1.ann1.Q6KLHZ Arachis hypogaea HOM05D000454 ORTHO05D007581 8.8e-20 101.7 122 46.7
Lalb_Chr09g0330911 Lupinus albus HOM05D000454 ORTHO05D007581 8.8e-20 101.7 124 43.5
VMungo1215G3372 Vigna mungo HOM05D000454 ORTHO05D007581 2.6e-19 100.1 116 46.6
Glyma.05G238600 Glycine max HOM05D000454 ORTHO05D007581 5.7e-19 99.0 125 41.6
VMungo0251G1416 Vigna mungo HOM05D000454 ORTHO05D007581 5.7e-19 99.0 119 42.9
Psat6g046240 Pisum sativum HOM05D000454 ORTHO05D007581 7.4e-19 98.6 128 45.3
Lj4g0012485 Lotus japonicus HOM05D000454 ORTHO05D007581 9.7e-19 98.2 131 40.5
COL.COLO4_16585 Corchorus olitorius HOM05D000454 ORTHO05D007581 4.8e-18 95.9 118 47.5
Ca_12548_v3 Cicer arietinum L. HOM05D000454 ORTHO05D007581 8.2e-18 95.1 130 43.8
AUR62038472 Chenopodium quinoa HOM05D000454 ORTHO05D007581 1.1e-17 94.7 130 42.3
Glyma.08G045700 Glycine max HOM05D000454 ORTHO05D007581 1.1e-17 94.7 120 40.0
AUR62014246 Chenopodium quinoa HOM05D000454 ORTHO05D007581 3.1e-17 93.2 122 42.6
EL10Ac6g14115 Beta vulgaris HOM05D000454 ORTHO05D007581 4.1e-17 92.8 135 39.3
ECA233G0574 Erigeron canadensis HOM05D000454 ORTHO05D007581 6.9e-17 92.0 108 47.2
Hund24925 Selenicereus undatus HOM05D000454 ORTHO05D007581 5.9e-16 89.0 132 38.6
Ca_17279_v3 Cicer arietinum L. HOM05D000454 ORTHO05D007581 7.7e-16 88.6 124 41.1
Ah.03g137410 Amaranthus hybridus HOM05D000454 ORTHO05D007581 2.9e-15 86.7 122 37.7
Zm00001eb253830 Zea mays HOM05D000454 ORTHO05D007581 6.5e-15 85.5 115 38.3
Os02g0735700 Oryza sativa ssp. japonica HOM05D000454 ORTHO05D007581 1.1e-14 84.7 115 37.4
HPP92_020302 Vanilla planifolia HOM05D000454 ORTHO05D007581 2.5e-14 83.6 54 64.8
Aqoxy3G00011 Aquilegia oxysepala HOM05D000454 ORTHO05D007581 3.2e-14 83.2 149 35.6
Zm00001eb190350 Zea mays HOM05D000454 ORTHO05D007581 1.2e-13 81.3 115 38.3
ATR0753G008 Amborella trichopoda HOM05D000454 ORTHO05D007581 1.6e-13 80.9 121 37.2
TPR.G20758 Trifolium pratense HOM05D000454 ORTHO05D023171 2.7e-13 80.1 53 67.9
Peaxi162Scf00655g00122 Petunia axillaris HOM05D000454 ORTHO05D007581 6.7e-12 75.5 120 37.5
Psat7g008040 Pisum sativum HOM05D000454 ORTHO05D007581 8.8e-12 75.1 47 68.1
arahy.Tifrunner.gnm1.ann1.ML4SS4 Arachis hypogaea HOM05D000454 ORTHO05D007581 2.6e-11 73.6 131 36.6
GSVIVG01011665001 Vitis vinifera HOM05D000454 ORTHO05D007581 7.4e-11 72.0 43 72.1
Ca_17257_v3 Cicer arietinum L. HOM05D000454 ORTHO05D007581 6.3e-10 68.9 44 68.2
CDE07G0847 Ceratophyllum demersum HOM05D000454 ORTHO05D007581 4.2e-06 56.2 123 25.2


User provided reference genes

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