Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow2G0317 Salvia bowleyana HOM05D003751 ORTHO05D004765 6.3e-85 318.5 293 100.0
SalBow2G2522 Salvia bowleyana HOM05D003751 ORTHO05D004765 4.5e-59 232.6 293 87.7
SalBow2G2568 Salvia bowleyana HOM05D003751 ORTHO05D004765 2.2e-58 230.3 293 87.0
SGA_v2.0_scaffold36G14436 Striga asiatica HOM05D003751 ORTHO05D004765 5.0e-50 202.6 293 80.2
Migut.L01211 Erythranthe guttata HOM05D003751 ORTHO05D004765 1.9e-49 200.7 293 80.9
SGA_v2.0_scaffold16G07765 Striga asiatica HOM05D003751 ORTHO05D004765 1.2e-48 198.0 293 79.5
MSTRG.7761 Avicennia marina HOM05D003751 ORTHO05D004765 1.2e-46 191.4 257 87.5
Migut.E00057 Erythranthe guttata HOM05D003751 ORTHO05D004765 9.8e-46 188.3 293 78.2
MSTRG.738 Avicennia marina HOM05D003751 ORTHO05D004765 5.0e-42 176.0 293 75.4
Cc11_g12270 Coffea canephora HOM05D003751 ORTHO05D004765 1.5e-41 174.5 222 93.2
QL03p071051 Quercus lobata HOM05D003751 ORTHO05D004765 1.9e-41 174.1 222 91.9
Hund05853 Selenicereus undatus HOM05D003751 ORTHO05D004765 1.9e-41 174.1 222 91.9
Lsat_1_v5_gn_4_12041 Lactuca sativa HOM05D003751 ORTHO05D004765 2.5e-41 173.7 237 90.3
Dinv34089 Davidia involucrata HOM05D003751 ORTHO05D004765 3.3e-41 173.3 226 92.9
FAN17G0137 Fragaria x ananassa HOM05D003751 ORTHO05D004765 3.3e-41 173.3 222 94.6
Hma1.2p1_0357F.1_g134490 Hydrangea macrophylla HOM05D003751 ORTHO05D004765 3.3e-41 173.3 222 94.1
FAN22G1318 Fragaria x ananassa HOM05D003751 ORTHO05D004765 4.3e-41 172.9 222 94.1
Lsat_1_v5_gn_8_48161 Lactuca sativa HOM05D003751 ORTHO05D004765 4.3e-41 172.9 222 94.1
RcHm_v2.0_Chr4g0438711 Rosa chinensis HOM05D003751 ORTHO05D004765 4.3e-41 172.9 222 94.1
TWI79G0662 Tripterygium wilfordii HOM05D003751 ORTHO05D004765 4.3e-41 172.9 222 94.1
CANSAT80G0608 Cannabis sativa HOM05D003751 ORTHO05D004765 5.6e-41 172.6 222 93.7
CANSAT80G1362 Cannabis sativa HOM05D003751 ORTHO05D004765 5.6e-41 172.6 222 93.7
CAN.G541.15 Capsicum annuum HOM05D003751 ORTHO05D004765 5.6e-41 172.6 222 94.1
Cpa.g.sc1.101 Carica papaya HOM05D003751 ORTHO05D004765 5.6e-41 172.6 249 83.9
Gohir.D07G073800 Gossypium hirsutum HOM05D003751 ORTHO05D004765 5.6e-41 172.6 222 92.3
HanXRQChr08g0211521 Helianthus annuus HOM05D003751 ORTHO05D004765 5.6e-41 172.6 286 78.0
Nitab4.5_0000720g0010 Nicotiana tabacum HOM05D003751 ORTHO05D004765 5.6e-41 172.6 222 93.7
Nitab4.5_0002832g0050 Nicotiana tabacum HOM05D003751 ORTHO05D004765 5.6e-41 172.6 222 93.7
Solyc01g011040.3 Solanum lycopersicum HOM05D003751 ORTHO05D004765 5.6e-41 172.6 222 94.1
Sopen01g034040 Solanum pennellii HOM05D003751 ORTHO05D004765 5.6e-41 172.6 222 94.1
PGSC0003DMG400004190 Solanum tuberosum HOM05D003751 ORTHO05D004765 5.6e-41 172.6 222 94.1
arahy.Tifrunner.gnm1.ann1.V223R1 Arachis hypogaea HOM05D003751 ORTHO05D004765 7.3e-41 172.2 222 94.1
arahy.Tifrunner.gnm1.ann1.Y3WTJM Arachis hypogaea HOM05D003751 ORTHO05D004765 7.3e-41 172.2 222 94.1
Gohir.A07G069400 Gossypium hirsutum HOM05D003751 ORTHO05D004765 7.3e-41 172.2 222 92.8
Sc11g0002320 Simmondsia chinensis HOM05D003751 ORTHO05D004765 7.3e-41 172.2 222 90.1
COL.COLO4_36892 Corchorus olitorius HOM05D003751 ORTHO05D004765 9.5e-41 171.8 240 87.5
HanXRQChr12g0379561 Helianthus annuus HOM05D003751 ORTHO05D004765 9.5e-41 171.8 222 93.2
Actinidia12325 Actinidia chinensis HOM05D003751 ORTHO05D004765 1.2e-40 171.4 222 93.2
Gorai.001G078000 Gossypium raimondii HOM05D003751 ORTHO05D004765 1.2e-40 171.4 222 92.3
Lj6A782T110 Lonicera japonica HOM05D003751 ORTHO05D004765 1.2e-40 171.4 222 93.7
TWI75G1095 Tripterygium wilfordii HOM05D003751 ORTHO05D004765 1.2e-40 171.4 222 92.3
ECA233G2546 Erigeron canadensis HOM05D003751 ORTHO05D004765 1.6e-40 171.0 222 93.7
GSVIVG01012205001 Vitis vinifera HOM05D003751 ORTHO05D004765 1.6e-40 171.0 222 93.7
Ah.03g139090 Amaranthus hybridus HOM05D003751 ORTHO05D004765 2.1e-40 170.6 238 87.0
MD13G1065200 Malus domestica HOM05D003751 ORTHO05D004765 2.1e-40 170.6 222 93.7
Manes.05G108200 Manihot esculenta HOM05D003751 ORTHO05D004765 2.1e-40 170.6 222 92.3
Phvul.002G081300 Phaseolus vulgaris HOM05D003751 ORTHO05D004765 2.1e-40 170.6 222 94.1
Prupe.1G283000 Prunus persica HOM05D003751 ORTHO05D004765 2.1e-40 170.6 222 93.7
Actinidia33247 Actinidia chinensis HOM05D003751 ORTHO05D004765 2.8e-40 170.2 239 88.7
Cfa008900 Carpinus fangiana HOM05D003751 ORTHO05D004765 2.8e-40 170.2 250 85.6
CiPaw.05G127300 Carya illinoinensis HOM05D003751 ORTHO05D004765 2.8e-40 170.2 241 88.0
VMungo1215G2610 Vigna mungo HOM05D003751 ORTHO05D004765 3.6e-40 169.9 222 93.7
Ca_04940_v3 Cicer arietinum L. HOM05D003751 ORTHO05D004765 8.0e-40 168.7 222 93.2
Ciclev10021138m.g Citrus clementina HOM05D003751 ORTHO05D004765 8.0e-40 168.7 222 93.7
Duzib205G0623 Durio zibethinus HOM05D003751 ORTHO05D004765 8.0e-40 168.7 240 84.6
Glyma.02G114800 Glycine max HOM05D003751 ORTHO05D004765 8.0e-40 168.7 248 85.9
Gohir.A12G180500 Gossypium hirsutum HOM05D003751 ORTHO05D004765 8.0e-40 168.7 222 89.6
AUR62003123 Chenopodium quinoa HOM05D003751 ORTHO05D004765 1.0e-39 168.3 245 84.5
Thecc.03G096900 Theobroma cacao HOM05D003751 ORTHO05D004765 1.0e-39 168.3 240 87.9
Lj2g0008638 Lotus japonicus HOM05D003751 ORTHO05D004765 1.4e-39 167.9 254 84.3
Peaxi162Scf00314g00122 Petunia axillaris HOM05D003751 ORTHO05D004765 1.4e-39 167.9 225 88.4
CiPaw.06G090700 Carya illinoinensis HOM05D003751 ORTHO05D004765 1.8e-39 167.5 250 84.8
Lalb_Chr10g0098641 Lupinus albus HOM05D003751 ORTHO05D004765 1.8e-39 167.5 222 92.8
Lalb_Chr17g0341071 Lupinus albus HOM05D003751 ORTHO05D004765 1.8e-39 167.5 222 92.8
TPR.G24438 Trifolium pratense HOM05D003751 ORTHO05D004765 1.8e-39 167.5 259 82.6
TAR622G0005 Trochodendron aralioides HOM05D003751 ORTHO05D004765 1.8e-39 167.5 222 92.8
Gorai.008G196500 Gossypium raimondii HOM05D003751 ORTHO05D004765 2.3e-39 167.2 222 91.9
MD16G1063500 Malus domestica HOM05D003751 ORTHO05D004765 2.3e-39 167.2 222 92.8
PSO063G1864 Papaver somniferum HOM05D003751 ORTHO05D004765 2.3e-39 167.2 222 94.1
Glyma.01G056300 Glycine max HOM05D003751 ORTHO05D004765 3.0e-39 166.8 222 93.2
Medtr5g043800 Medicago truncatula HOM05D003751 ORTHO05D004765 3.0e-39 166.8 252 84.1
Hund14089 Selenicereus undatus HOM05D003751 ORTHO05D004765 3.0e-39 166.8 248 81.9
Manes.01G029800 Manihot esculenta HOM05D003751 ORTHO05D004765 4.0e-39 166.4 232 87.5
Potri.010G160700 Populus trichocarpa HOM05D003751 ORTHO05D004765 4.0e-39 166.4 222 91.0
AL8G37900 Arabidopsis lyrata HOM05D003751 ORTHO05D004765 5.2e-39 166.0 238 87.4
Carub.0008s2191 Capsella rubella HOM05D003751 ORTHO05D004765 8.9e-39 165.2 235 88.5
Sabra08G0070200 Salix brachista HOM05D003751 ORTHO05D004765 8.9e-39 165.2 222 91.0
CARHR274990 Cardamine hirsuta HOM05D003751 ORTHO05D004765 1.2e-38 164.9 222 91.9
PGR102G2931 Punica granatum HOM05D003751 ORTHO05D004765 1.2e-38 164.9 222 91.4
Rhsim12G0134600 Rhododendron simsii HOM05D003751 ORTHO05D004765 1.2e-38 164.9 245 74.7
Sp2g24470 Schrenkiella parvula HOM05D003751 ORTHO05D004765 1.2e-38 164.9 222 91.9
Sed0012304 Sechium edule HOM05D003751 ORTHO05D004765 1.2e-38 164.9 222 89.2
THA.LOC104818332 Tarenaya hassleriana HOM05D003751 ORTHO05D004765 1.2e-38 164.9 242 86.0
Eucgr.B03173 Eucalyptus grandis HOM05D003751 ORTHO05D004765 1.5e-38 164.5 222 91.9
Psat2g128600 Pisum sativum HOM05D003751 ORTHO05D004765 2.0e-38 164.1 245 85.3
Sabra10G0122300 Salix brachista HOM05D003751 ORTHO05D004765 2.0e-38 164.1 222 91.0
THA.LOC104801343 Tarenaya hassleriana HOM05D003751 ORTHO05D004765 2.0e-38 164.1 236 87.7
Thhalv10004587m.g Eutrema salsugineum HOM05D003751 ORTHO05D004765 2.6e-38 163.7 235 88.1
AT5G61240 Arabidopsis thaliana HOM05D003751 ORTHO05D004765 3.4e-38 163.3 242 85.5
Duzib251G0914 Durio zibethinus HOM05D003751 ORTHO05D004765 3.4e-38 163.3 222 90.1
Potri.008G093400 Populus trichocarpa HOM05D003751 ORTHO05D004765 3.4e-38 163.3 222 91.0
SEGI_02286 Sequoiadendron giganteum HOM05D003751 ORTHO05D004765 3.4e-38 163.3 222 88.3
Thecc.02G335000 Theobroma cacao HOM05D003751 ORTHO05D004765 3.4e-38 163.3 232 87.1
Actinidia19010 Actinidia chinensis HOM05D003751 ORTHO05D004765 5.7e-38 162.5 222 91.0
BolC9t53725H Brassica oleracea HOM05D003751 ORTHO05D006139 7.5e-38 162.2 226 90.3
Nn3g17386 Nelumbo nucifera HOM05D003751 ORTHO05D004765 7.5e-38 162.2 222 90.1
Nn4g23361 Nelumbo nucifera HOM05D003751 ORTHO05D004765 7.5e-38 162.2 222 91.0
Sed0016795 Sechium edule HOM05D003751 ORTHO05D004765 1.7e-37 161.0 283 74.9
BcaC06g33170 Brassica carinata HOM05D003751 ORTHO05D004765 2.9e-37 160.2 221 91.0
BcaC06g33219 Brassica carinata HOM05D003751 ORTHO05D004765 2.9e-37 160.2 221 91.0
A03p46870 Brassica napus HOM05D003751 ORTHO05D004765 2.9e-37 160.2 221 91.0
C07p44920 Brassica napus HOM05D003751 ORTHO05D004765 2.9e-37 160.2 221 91.0
AUR62007943 Chenopodium quinoa HOM05D003751 ORTHO05D004765 2.9e-37 160.2 245 68.6
Peaxi162Scf00097g00610 Petunia axillaris HOM05D003751 ORTHO05D004765 2.9e-37 160.2 249 67.1
BcaC04g23458 Brassica carinata HOM05D003751 ORTHO05D004765 4.9e-37 159.5 221 91.0
A09p07270 Brassica napus HOM05D003751 ORTHO05D004765 4.9e-37 159.5 222 90.5
C09p08130 Brassica napus HOM05D003751 ORTHO05D004765 4.9e-37 159.5 221 91.0
Aa31LG11G2120 Aethionema arabicum HOM05D003751 ORTHO05D004765 6.4e-37 159.1 226 90.3
Hma1.2p1_0322F.1_g124910 Hydrangea macrophylla HOM05D003751 ORTHO05D004765 6.4e-37 159.1 218 92.7
COL.COLO4_27919 Corchorus olitorius HOM05D003751 ORTHO05D004765 1.8e-36 157.5 220 88.6
CsaV3_5G033180 Cucumis sativus L. HOM05D003751 ORTHO05D004765 4.1e-36 156.4 288 74.7
CSS0038990 Camellia sinensis var. sinensis HOM05D003751 ORTHO05D004765 5.4e-36 156.0 280 75.4
CDE07G1785 Ceratophyllum demersum HOM05D003751 ORTHO05D004765 1.6e-35 154.5 222 89.6
vmacro01326 Vaccinium macrocarpon HOM05D003751 ORTHO05D004765 2.0e-35 154.1 250 57.2
SHI26375 Sapria himalayana HOM05D003751 ORTHO05D004765 2.7e-35 153.7 241 66.4
THA.LOC104824065 Tarenaya hassleriana HOM05D003751 ORTHO05D004765 4.6e-35 152.9 222 86.0
BraA03t13807Z Brassica rapa HOM05D003751 ORTHO05D004765 6.0e-35 152.5 230 70.9
Gohir.D02G128600 Gossypium hirsutum HOM05D003751 ORTHO05D004765 6.0e-35 152.5 222 87.4
Gorai.005G144300 Gossypium raimondii HOM05D003751 ORTHO05D004765 6.0e-35 152.5 222 87.4
Haze_11929 Corylus avellana HOM05D003751 ORTHO05D004765 3.0e-34 150.2 283 56.2
BolC7t45015H Brassica oleracea HOM05D003751 ORTHO05D004765 3.9e-34 149.8 237 67.1
BraA09t36376Z Brassica rapa HOM05D003751 ORTHO05D004765 6.6e-34 149.1 241 66.4
Gohir.D12G183125 Gossypium hirsutum HOM05D003751 ORTHO05D004765 1.4e-31 141.4 217 88.0
Gohir.D12G183200 Gossypium hirsutum HOM05D003751 ORTHO05D004765 1.4e-31 141.4 217 88.0
Sp1g12050 Schrenkiella parvula HOM05D003751 ORTHO05D004765 5.2e-31 139.4 251 75.3
AT1G13910 Arabidopsis thaliana HOM05D003751 ORTHO05D004765 8.9e-31 138.7 244 77.9
AL1G25740 Arabidopsis lyrata HOM05D003751 ORTHO05D004765 1.2e-30 138.3 222 82.9
Thhalv10008166m.g Eutrema salsugineum HOM05D003751 ORTHO05D004765 1.2e-30 138.3 251 78.1
ATR0064G031 Amborella trichopoda HOM05D003751 ORTHO05D004765 2.0e-30 137.5 73 90.4
CSS0000444 Camellia sinensis var. sinensis HOM05D003751 ORTHO05D004765 2.6e-30 137.1 208 66.8
DCAR_007183 Daucus carota HOM05D003751 ORTHO05D004765 7.5e-30 135.6 239 79.9
PSO384G1483 Papaver somniferum HOM05D003751 ORTHO05D004765 9.8e-30 135.2 73 91.8
QL03p070738 Quercus lobata HOM05D003751 ORTHO05D004765 9.8e-30 135.2 73 89.0
Aqoxy3G03571 Aquilegia oxysepala HOM05D003751 ORTHO05D004765 1.3e-29 134.8 73 90.4
FvH4_4g30420 Fragaria vesca HOM05D003751 ORTHO05D004765 1.3e-29 134.8 245 81.2
FAN12G0947 Fragaria x ananassa HOM05D003751 ORTHO05D004765 1.3e-29 134.8 222 84.7
HPP92_007743 Vanilla planifolia HOM05D003751 ORTHO05D004765 1.7e-29 134.4 90 76.7
Dinv38780 Davidia involucrata HOM05D003751 ORTHO05D004765 2.2e-29 134.0 101 68.3
FAN07G2601 Fragaria x ananassa HOM05D003751 ORTHO05D004765 2.2e-29 134.0 73 87.7
Carub.0001s1361 Capsella rubella HOM05D003751 ORTHO05D004765 2.9e-29 133.7 222 83.3
MELO3C002928.2 Cucumis melo HOM05D003751 ORTHO05D004765 6.4e-29 132.5 222 86.9
vmacro16373 Vaccinium macrocarpon HOM05D003751 ORTHO05D004765 6.4e-29 132.5 73 84.9
vmacro23251 Vaccinium macrocarpon HOM05D003751 ORTHO05D004765 6.4e-29 132.5 73 84.9
MBI16_g16360_MAGBIO Magnolia biondii HOM05D003751 ORTHO05D004765 8.3e-29 132.1 90 75.6
Cpa.g.sc94.5 Carica papaya HOM05D003751 ORTHO05D004765 1.1e-28 131.7 73 86.3
CsaV3_5G025510 Cucumis sativus L. HOM05D003751 ORTHO05D004765 1.1e-28 131.7 241 82.6
CDE04G0854 Ceratophyllum demersum HOM05D003751 ORTHO05D004765 4.1e-28 129.8 90 73.3
ClCG05G023830 Citrullus lanatus HOM05D003751 ORTHO05D004765 4.1e-28 129.8 139 54.0
Os03g0211900 Oryza sativa ssp. japonica HOM05D003751 ORTHO05D004765 4.1e-28 129.8 73 84.9
Zm00001eb008460 Zea mays HOM05D003751 ORTHO05D004765 4.1e-28 129.8 73 84.9
MELO3C012139.2 Cucumis melo HOM05D003751 ORTHO05D004765 5.4e-28 129.4 139 54.0
ClCG09G022210 Citrullus lanatus HOM05D003751 ORTHO05D004765 1.6e-27 127.9 92 72.8
DCAR_005254 Daucus carota HOM05D003751 ORTHO05D004765 2.0e-27 127.5 99 67.7
DCAR_016919 Daucus carota HOM05D003751 ORTHO05D004765 2.0e-27 127.5 99 67.7
Aa31LG1G1100 Aethionema arabicum HOM05D002953 ORTHO05D003249 2.7e-27 127.1 222 82.4
SMO307G0068 Selaginella moellendorffii HOM05D003751 ORTHO05D004765 1.7e-26 124.4 227 77.1
Hund25193 Selenicereus undatus HOM05D003751 ORTHO05D004765 6.6e-26 122.5 73 82.2
AagrBONN_evm.TU.Sc2ySwM_228.5257 Anthoceros agrestis HOM05D003751 ORTHO05D004765 6.8e-23 112.5 223 75.3
Oeu031422.1 Olea europaea HOM05D003751 ORTHO05D004765 4.9e-21 106.3 123 51.2
CARHR014280 Cardamine hirsuta HOM05D003751 ORTHO05D004765 2.4e-20 104.0 72 62.5
SMO239G0097 Selaginella moellendorffii HOM05D003751 ORTHO05D011646 1.1e-17 95.1 87 50.6
Actinidia28633 Actinidia chinensis HOM05D003751 ORTHO05D004765 4.3e-17 93.2 201 74.6
SMO239G0021 Selaginella moellendorffii HOM05D003751 ORTHO05D011646 2.1e-16 90.9 62 61.3
Nitab4.5_0017073g0010 Nicotiana tabacum HOM05D003751 ORTHO05D004765 1.4e-15 88.2 65 67.7
Nitab4.5_0004304g0080 Nicotiana tabacum HOM05D003751 ORTHO05D004765 4.0e-15 86.7 79 55.7
Sopen05g021560 Solanum pennellii HOM05D003751 ORTHO05D004765 3.4e-14 83.6 55 70.9
CSS0008157 Camellia sinensis var. sinensis HOM05D003751 ORTHO05D004765 1.3e-13 81.6 41 90.2
Lj3A1031T31 Lonicera japonica HOM05D003751 ORTHO05D004765 1.1e-12 78.6 41 87.8
Gohir.A03G103400 Gossypium hirsutum HOM05D003751 ORTHO05D004765 1.9e-12 77.8 178 88.8
CAN.G607.6 Capsicum annuum HOM05D003751 ORTHO05D024790 5.4e-12 76.3 41 90.2
Sopen05g021540 Solanum pennellii HOM05D003751 ORTHO05D004765 5.4e-12 76.3 53 67.9
SEGI_40768 Sequoiadendron giganteum HOM05D003751 ORTHO05D004765 1.0e-10 72.0 58 60.3
Gohir.D13G128551 Gossypium hirsutum HOM05D003751 ORTHO05D024790 1.7e-10 71.2 41 82.9
Gorai.013G144600 Gossypium raimondii HOM05D003751 ORTHO05D024790 1.5e-09 68.2 41 80.5
Dinv16710 Davidia involucrata HOM05D003751 ORTHO05D004765 5.6e-09 66.2 222 72.5
BolC2t12198H Brassica oleracea HOM05D003751 ORTHO05D017703 3.1e-07 60.5 33 87.9
RcHm_v2.0_Chr3g0459551 Rosa chinensis HOM05D003751 ORTHO05D004765 9.0e-07 58.9 48 66.7
C02p61470 Brassica napus HOM05D003751 ORTHO05D017703 2.6e-06 57.4 33 81.8


User provided reference genes

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