Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow2G0224 Salvia bowleyana HOM05D004989 ORTHO05D006335 1.2e-211 739.6 373 100.0
MSTRG.4001 Avicennia marina HOM05D004989 ORTHO05D006335 4.9e-173 611.3 373 83.1
Migut.G00301 Erythranthe guttata HOM05D004989 ORTHO05D006335 2.7e-163 578.9 377 79.8
MSTRG.10011 Avicennia marina HOM05D004989 ORTHO05D006335 5.9e-158 561.2 334 83.8
Peaxi162Scf00134g02033 Petunia axillaris HOM05D004989 ORTHO05D006335 7.4e-153 544.3 366 76.2
Cc03_g03230 Coffea canephora HOM05D004989 ORTHO05D006335 3.7e-152 542.0 369 73.7
HanXRQChr12g0359311 Helianthus annuus HOM05D004989 ORTHO05D006335 1.4e-151 540.0 369 74.0
unitig_736.g22488 Utricularia gibba HOM05D004989 ORTHO05D006335 8.5e-149 530.8 371 74.1
Dinv38405 Davidia involucrata HOM05D004989 ORTHO05D006335 1.9e-148 529.6 369 74.5
Dinv44490 Davidia involucrata HOM05D004989 ORTHO05D006335 1.6e-147 526.6 369 72.9
CSS0000312 Camellia sinensis var. sinensis HOM05D004989 ORTHO05D006335 6.7e-146 521.2 370 72.2
CSS0017868 Camellia sinensis var. sinensis HOM05D004989 ORTHO05D006335 1.1e-145 520.4 370 73.8
CANSAT78G0752 Cannabis sativa HOM05D004989 ORTHO05D006335 5.7e-145 518.1 372 71.0
Prupe.1G152800 Prunus persica HOM05D004989 ORTHO05D006335 7.4e-145 517.7 369 71.3
MD16G1186000 Malus domestica HOM05D004989 ORTHO05D006335 1.7e-144 516.5 378 70.4
Sopen01g031620 Solanum pennellii HOM05D004989 ORTHO05D006335 2.2e-144 516.2 334 77.5
CAN.G69.27 Capsicum annuum HOM05D004989 ORTHO05D006335 4.8e-144 515.0 334 76.9
ECA234G2869 Erigeron canadensis HOM05D004989 ORTHO05D006335 1.8e-143 513.1 336 75.9
Solyc01g079860.3 Solanum lycopersicum HOM05D004989 ORTHO05D006335 1.2e-142 510.4 334 76.9
Cfa015597 Carpinus fangiana HOM05D004989 ORTHO05D006335 1.6e-142 510.0 372 71.2
FvH4_4g14760 Fragaria vesca HOM05D004989 ORTHO05D006335 2.0e-142 509.6 369 71.3
GSVIVG01017902001 Vitis vinifera HOM05D004989 ORTHO05D006335 2.6e-142 509.2 369 72.4
Nitab4.5_0005927g0020 Nicotiana tabacum HOM05D004989 ORTHO05D006335 4.5e-142 508.4 391 69.3
TAR365G0616 Trochodendron aralioides HOM05D004989 ORTHO05D006335 5.9e-142 508.1 372 71.5
RcHm_v2.0_Chr4g0417841 Rosa chinensis HOM05D004989 ORTHO05D006335 7.7e-142 507.7 369 70.7
CiPaw.02G093300 Carya illinoinensis HOM05D004989 ORTHO05D006335 1.3e-141 506.9 370 69.7
vmacro15315 Vaccinium macrocarpon HOM05D004989 ORTHO05D006335 1.3e-141 506.9 374 70.6
Oeu042787.2 Olea europaea HOM05D004989 ORTHO05D006335 1.6e-139 500.0 439 62.9
EL10Ac3g05973 Beta vulgaris HOM05D004989 ORTHO05D006335 1.8e-138 496.5 369 69.1
PSO017G3853 Papaver somniferum HOM05D004989 ORTHO05D006335 2.3e-138 496.1 373 67.8
FAN17G0130 Fragaria x ananassa HOM05D004989 ORTHO05D006335 3.3e-137 492.3 388 67.0
QL06p003872 Quercus lobata HOM05D004989 ORTHO05D006335 5.7e-137 491.5 384 66.9
Gohir.A02G029300 Gossypium hirsutum HOM05D004989 ORTHO05D006335 7.5e-137 491.1 377 69.8
Nitab4.5_0000630g0050 Nicotiana tabacum HOM05D004989 ORTHO05D006335 7.5e-137 491.1 287 83.3
Gorai.005G041000 Gossypium raimondii HOM05D004989 ORTHO05D006335 9.7e-137 490.7 377 69.2
Glyma.07G257800 Glycine max HOM05D004989 ORTHO05D006335 1.3e-136 490.3 372 67.5
Gohir.D02G037100 Gossypium hirsutum HOM05D004989 ORTHO05D006335 1.7e-136 490.0 377 69.2
VMungo1215G0587 Vigna mungo HOM05D004989 ORTHO05D006335 1.7e-136 490.0 372 67.7
Aqoxy3G00936 Aquilegia oxysepala HOM05D004989 ORTHO05D006335 2.2e-136 489.6 371 68.2
arahy.Tifrunner.gnm1.ann1.L7AGGG Arachis hypogaea HOM05D004989 ORTHO05D006335 2.2e-136 489.6 384 67.2
Potri.008G203600 Populus trichocarpa HOM05D004989 ORTHO05D006335 2.8e-136 489.2 368 68.5
Lalb_Chr18g0056141 Lupinus albus HOM05D004989 ORTHO05D006335 8.2e-136 487.6 372 68.5
arahy.Tifrunner.gnm1.ann1.8A1ZYN Arachis hypogaea HOM05D004989 ORTHO05D006335 1.8e-135 486.5 384 66.9
MELO3C006557.2 Cucumis melo HOM05D004989 ORTHO05D006335 3.1e-135 485.7 370 67.3
Nn1g02182 Nelumbo nucifera HOM05D004989 ORTHO05D006335 3.1e-135 485.7 372 66.7
Thecc.04G224100 Theobroma cacao HOM05D004989 ORTHO05D006335 5.3e-135 485.0 375 68.3
PGSC0003DMG400009024 Solanum tuberosum HOM05D004989 ORTHO05D006335 9.1e-135 484.2 289 82.4
Glyma.17G016200 Glycine max HOM05D004989 ORTHO05D006335 1.2e-134 483.8 371 67.7
COL.COLO4_26626 Corchorus olitorius HOM05D004989 ORTHO05D006335 1.6e-134 483.4 397 63.7
Aa31LG11G10490 Aethionema arabicum HOM05D004989 ORTHO05D006335 2.0e-134 483.0 369 68.6
Sed0017941 Sechium edule HOM05D004989 ORTHO05D006335 2.7e-134 482.6 370 67.0
CsaV3_3G013610 Cucumis sativus L. HOM05D004989 ORTHO05D006335 3.5e-134 482.3 370 66.8
Manes.03G183100 Manihot esculenta HOM05D004989 ORTHO05D006335 5.9e-134 481.5 370 67.8
Rhsim02G0020900 Rhododendron simsii HOM05D004989 ORTHO05D006335 1.3e-133 480.3 407 62.7
Lj6g0002948 Lotus japonicus HOM05D004989 ORTHO05D006335 2.9e-133 479.2 370 67.6
CDE07G1289 Ceratophyllum demersum HOM05D004989 ORTHO05D006335 1.9e-132 476.5 370 67.8
Ca_00634_v3 Cicer arietinum L. HOM05D004989 ORTHO05D006335 3.2e-132 475.7 380 66.6
MBI14_g28267_MAGBIO Magnolia biondii HOM05D004989 ORTHO05D006335 3.2e-132 475.7 364 68.4
Atru.chr4.2544 Acer truncatum HOM05D004989 ORTHO05D006335 1.6e-131 473.4 335 71.0
AUR62026218 Chenopodium quinoa HOM05D004989 ORTHO05D006335 2.1e-131 473.0 365 67.7
Medtr2g022530 Medicago truncatula HOM05D004989 ORTHO05D006335 2.1e-131 473.0 370 66.8
Carub.0006s1748 Capsella rubella HOM05D004989 ORTHO05D006335 4.7e-131 471.9 371 65.8
FAN22G1009 Fragaria x ananassa HOM05D004989 ORTHO05D006335 4.7e-131 471.9 386 65.0
BcaB01g04874 Brassica carinata HOM05D004989 ORTHO05D006335 6.1e-131 471.5 371 66.3
Thhalv10013830m.g Eutrema salsugineum HOM05D004989 ORTHO05D006335 8.0e-131 471.1 371 65.8
AL6G30570 Arabidopsis lyrata HOM05D004989 ORTHO05D006335 1.0e-130 470.7 371 66.0
RcHm_v2.0_Chr0c32g0501661 Rosa chinensis HOM05D004989 ORTHO05D006335 1.4e-130 470.3 361 70.1
PSO478G2898 Papaver somniferum HOM05D004989 ORTHO05D006335 2.3e-130 469.5 323 73.1
AT5G19150 Arabidopsis thaliana HOM05D004989 ORTHO05D006335 4.0e-130 468.8 371 66.3
BolC3t13560H Brassica oleracea HOM05D004989 ORTHO05D006335 4.0e-130 468.8 371 65.5
CARHR193800 Cardamine hirsuta HOM05D004989 ORTHO05D006335 3.4e-129 465.7 371 66.0
THA.LOC104818802 Tarenaya hassleriana HOM05D004989 ORTHO05D006335 3.4e-129 465.7 377 63.7
Sp6g25210 Schrenkiella parvula HOM05D004989 ORTHO05D006335 4.4e-129 465.3 371 65.0
BcaB01g05136 Brassica carinata HOM05D004989 ORTHO05D006335 7.5e-129 464.5 371 65.0
Eucgr.B01122 Eucalyptus grandis HOM05D004989 ORTHO05D006335 1.7e-128 463.4 375 62.7
Phvul.003G091700 Phaseolus vulgaris HOM05D004989 ORTHO05D006335 1.7e-128 463.4 330 69.4
Sabra08G0157900 Salix brachista HOM05D004989 ORTHO05D006335 1.7e-128 463.4 404 61.1
BraA03t10257Z Brassica rapa HOM05D004989 ORTHO05D006335 2.8e-128 462.6 384 63.3
A03p09380 Brassica napus HOM05D004989 ORTHO05D006335 4.8e-128 461.8 362 66.9
RcHm_v2.0_Chr0c32g0501471 Rosa chinensis HOM05D004989 ORTHO05D006335 4.8e-128 461.8 364 66.2
HPP92_005520 Vanilla planifolia HOM05D004989 ORTHO05D006335 8.3e-128 461.1 375 63.7
C03p10950 Brassica napus HOM05D004989 ORTHO05D006335 1.4e-127 460.3 380 63.2
Ah.07g202120 Amaranthus hybridus HOM05D004989 ORTHO05D006335 2.4e-127 459.5 369 64.8
Os11g0276300 Oryza sativa ssp. japonica HOM05D004989 ORTHO05D006335 7.0e-127 458.0 375 62.1
Zm00001eb168810 Zea mays HOM05D004989 ORTHO05D006335 3.8e-125 452.2 329 67.2
BraA02t05485Z Brassica rapa HOM05D004989 ORTHO05D006335 1.1e-124 450.7 331 68.9
Hund12013 Selenicereus undatus HOM05D004989 ORTHO05D006335 1.5e-124 450.3 328 66.8
C03p10960 Brassica napus HOM05D004989 ORTHO05D006335 1.2e-123 447.2 370 63.2
BcaB05g23373 Brassica carinata HOM05D004989 ORTHO05D006335 4.7e-123 445.3 331 68.3
TWI73G0966 Tripterygium wilfordii HOM05D004989 ORTHO05D006335 4.7e-123 445.3 372 65.6
ATR0743G104 Amborella trichopoda HOM05D004989 ORTHO05D006335 8.0e-123 444.5 360 64.2
BcaC03g13646 Brassica carinata HOM05D004989 ORTHO05D006335 1.8e-122 443.4 331 68.0
BolC2t06940H Brassica oleracea HOM05D004989 ORTHO05D006335 1.8e-122 443.4 331 68.0
Haze_00947 Corylus avellana HOM05D004989 ORTHO05D006335 3.0e-122 442.6 367 64.0
RcHm_v2.0_Chr3g0483801 Rosa chinensis HOM05D004989 ORTHO05D006335 5.2e-122 441.8 282 78.4
A02p05270 Brassica napus HOM05D004989 ORTHO05D006335 3.7e-120 435.6 326 68.4
Sc13g0004100 Simmondsia chinensis HOM05D004989 ORTHO05D006335 6.3e-120 434.9 315 68.9
C02p10390 Brassica napus HOM05D004989 ORTHO05D006335 1.1e-119 434.1 338 66.6
Actinidia36991 Actinidia chinensis HOM05D004989 ORTHO05D006335 1.2e-118 430.6 364 64.3
Ciclev10005119m.g Citrus clementina HOM05D004989 ORTHO05D006335 2.9e-117 426.0 313 68.7
Lj6A574T37 Lonicera japonica HOM05D004989 ORTHO05D006335 6.6e-117 424.9 269 79.2
Hma1.2p1_2553F.1_g324330 Hydrangea macrophylla HOM05D004989 ORTHO05D006335 8.0e-115 417.9 255 82.4
Lj6g0017812 Lotus japonicus HOM05D004989 ORTHO05D006335 8.3e-112 407.9 358 60.1
Psat1g182800 Pisum sativum HOM05D004989 ORTHO05D006335 3.2e-111 406.0 264 76.1
Mapoly0063s0079 Marchantia polymorpha HOM05D004989 ORTHO05D006335 4.3e-100 369.0 328 58.5
C03p10910 Brassica napus HOM05D004989 ORTHO05D006335 3.1e-98 362.8 257 71.2
SGA_v2.0_scaffold39G15320 Striga asiatica HOM05D004989 ORTHO05D006335 4.4e-97 359.0 196 89.3
CBR_g26053 Chara braunii HOM05D004989 ORTHO05D006335 1.3e-96 357.5 341 54.8
SMO361G0104 Selaginella moellendorffii HOM05D004989 ORTHO05D006335 3.7e-96 355.9 317 58.0
C03p10860 Brassica napus HOM05D004989 ORTHO05D006335 1.5e-92 344.0 365 54.2
HPP92_005588 Vanilla planifolia HOM05D004989 ORTHO05D006335 1.9e-92 343.6 294 62.6
ClCG05G005360 Citrullus lanatus HOM05D004989 ORTHO05D006335 1.2e-91 340.9 255 67.5
SHI00391 Sapria himalayana HOM05D004989 ORTHO05D006335 8.1e-91 338.2 313 55.6
Duzib151G0886 Durio zibethinus HOM05D004989 ORTHO05D006335 8.9e-90 334.7 376 52.1
BcaB01g05294 Brassica carinata HOM05D004989 ORTHO05D006335 4.4e-89 332.4 378 51.6
PGR142G2933 Punica granatum HOM05D004989 ORTHO05D006335 3.0e-85 319.7 373 51.2
AagrBONN_evm.TU.Sc2ySwM_344.1251 Anthoceros agrestis HOM05D004989 ORTHO05D006335 4.4e-81 305.8 376 47.1
Pp3c8_1650 Physcomitrium patens HOM05D004989 ORTHO05D006335 9.9e-81 304.7 287 54.0
FAN07G2774 Fragaria x ananassa HOM05D004989 ORTHO05D006335 3.2e-79 299.7 276 59.1
Hma1.2p1_2553F.1_g324320 Hydrangea macrophylla HOM05D004989 ORTHO05D006335 3.9e-77 292.7 198 75.8
TPR.G28611 Trifolium pratense HOM05D004989 ORTHO05D006739 1.3e-75 287.7 176 77.8
arahy.Tifrunner.gnm1.ann1.BS3LH0 Arachis hypogaea HOM05D004989 ORTHO05D006335 8.1e-75 285.0 384 46.1
Cre06.g250500 Chlamydomonas reinhardtii HOM05D004989 ORTHO05D006335 2.6e-65 253.4 357 38.1
arahy.Tifrunner.gnm1.ann1.J5ZRE9 Arachis hypogaea HOM05D004989 ORTHO05D006335 1.2e-62 244.6 188 64.4
Ca_00654_v3 Cicer arietinum L. HOM05D004989 ORTHO05D006335 6.0e-62 242.3 198 66.2
Hma1.2p1_0995F.1_g245810 Hydrangea macrophylla HOM05D004989 ORTHO05D006335 3.0e-61 240.0 180 71.1
TPR.G30683 Trifolium pratense HOM05D004989 ORTHO05D006335 5.1e-61 239.2 164 72.0
arahy.Tifrunner.gnm1.ann1.HR1U72 Arachis hypogaea HOM05D004989 ORTHO05D006335 7.4e-60 235.3 187 63.6
MCO05G313 Micromonas commoda HOM05D004989 ORTHO05D006335 4.8e-59 232.6 359 39.8
SEGI_35556 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 6.9e-58 228.8 200 59.5
Cpa.g.sc147.7 Carica papaya HOM05D004989 ORTHO05D006335 2.0e-57 227.3 215 58.1
PRCOL_00001617 Prasinoderma coloniale HOM05D004989 ORTHO05D006335 1.3e-56 224.6 354 39.0
Cfa024379 Carpinus fangiana HOM05D004989 ORTHO05D006335 2.2e-51 207.2 322 38.2
SEGI_07547 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 8.5e-48 195.3 180 55.0
SEGI_27897 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 7.2e-47 192.2 134 69.4
Hund03167 Selenicereus undatus HOM05D004989 ORTHO05D006335 2.1e-46 190.7 121 72.7
Atru.chr4.2545 Acer truncatum HOM05D004989 ORTHO05D006335 3.0e-45 186.8 172 58.1
Haze_26760 Corylus avellana HOM05D004980 ORTHO05D006505 3.0e-45 186.8 277 40.8
Cre05.g234664 Chlamydomonas reinhardtii HOM05D004989 ORTHO05D006335 2.6e-41 173.7 379 32.5
SEGI_12399 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 8.2e-35 152.1 129 59.7
Atru.chr4.2547 Acer truncatum HOM05D004989 ORTHO05D000586 2.5e-31 140.6 130 56.2
Cfa015379 Carpinus fangiana HOM05D000407 ORTHO05D002981 1.4e-29 134.8 176 46.6
Actinidia08511 Actinidia chinensis HOM05D004989 ORTHO05D006335 2.2e-27 127.5 336 32.1
Cpa.g.sc147.6 Carica papaya HOM05D004989 ORTHO05D006335 2.0e-25 120.9 69 82.6
Cpa.g.sc147.5 Carica papaya HOM05D004989 ORTHO05D006335 1.2e-22 111.7 95 63.2
TPR.G30666 Trifolium pratense HOM05D004989 ORTHO05D006335 6.3e-19 99.4 87 62.1
CBR_g19747 Chara braunii HOM05D000409 ORTHO05D000184 2.7e-17 94.0 91 51.6
AUR62026378 Chenopodium quinoa HOM05D004989 ORTHO05D006335 1.9e-15 87.8 72 61.1
FAN07G1160 Fragaria x ananassa HOM05D004989 ORTHO05D006335 5.9e-09 66.2 45 71.1


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