Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow2G0170 Salvia bowleyana HOM05D005900 ORTHO05D007306 8.2e-127 457.2 257 100.0
MSTRG.22403 Avicennia marina HOM05D005900 ORTHO05D007306 2.4e-65 253.1 215 64.2
SGA_v2.0_scaffold28G11983 Striga asiatica HOM05D005900 ORTHO05D007306 5.4e-62 241.9 213 63.8
SGA_v2.0_scaffold154G37193 Striga asiatica HOM05D005900 ORTHO05D007306 3.5e-61 239.2 213 62.9
Oeu055297.1 Olea europaea HOM05D005900 ORTHO05D007306 1.2e-56 224.2 211 61.1
Migut.C01115 Erythranthe guttata HOM05D005900 ORTHO05D007306 4.2e-54 215.7 209 58.9
Migut.C00405 Erythranthe guttata HOM05D005900 ORTHO05D007306 5.1e-52 208.8 211 58.3
Dinv35828 Davidia involucrata HOM05D005900 ORTHO05D007306 1.1e-49 201.1 233 51.5
Oeu001539.2 Olea europaea HOM05D005900 ORTHO05D007306 6.4e-47 191.8 262 48.1
Nitab4.5_0000059g0460 Nicotiana tabacum HOM05D005900 ORTHO05D007306 1.1e-46 191.0 213 54.5
Nitab4.5_0000191g0220 Nicotiana tabacum HOM05D005900 ORTHO05D007306 1.9e-46 190.3 213 54.0
Peaxi162Scf00698g00117 Petunia axillaris HOM05D005900 ORTHO05D007306 8.7e-44 181.4 212 53.8
Dinv16498 Davidia involucrata HOM05D005900 ORTHO05D007306 5.6e-43 178.7 190 54.7
PGSC0003DMG400008953 Solanum tuberosum HOM05D005900 ORTHO05D007306 1.3e-42 177.6 204 54.4
Sopen09g004610 Solanum pennellii HOM05D005900 ORTHO05D007306 8.2e-42 174.9 204 53.9
Solyc09g009850.4 Solanum lycopersicum HOM05D005900 ORTHO05D007306 1.4e-41 174.1 204 53.9
CANSAT80G1963 Cannabis sativa HOM05D005900 ORTHO05D007306 1.8e-41 173.7 203 50.2
CANSAT80G1771 Cannabis sativa HOM05D005900 ORTHO05D007306 6.9e-41 171.8 203 49.8
CSS0005312 Camellia sinensis var. sinensis HOM05D005900 ORTHO05D007306 1.2e-40 171.0 209 50.2
TAR371G1211 Trochodendron aralioides HOM05D005900 ORTHO05D007306 5.8e-40 168.7 199 47.7
PGSC0003DMG400022718 Solanum tuberosum HOM05D005900 ORTHO05D007306 1.7e-39 167.2 228 50.4
Cc04_g15880 Coffea canephora HOM05D005900 ORTHO05D007306 2.9e-39 166.4 201 48.8
Hma1.2p1_1494F.1_g286930 Hydrangea macrophylla HOM05D005900 ORTHO05D007306 1.1e-38 164.5 224 47.3
Solyc01g008760.4 Solanum lycopersicum HOM05D005900 ORTHO05D007306 1.9e-38 163.7 229 48.0
TWI36G0396 Tripterygium wilfordii HOM05D005900 ORTHO05D007306 3.2e-38 162.9 202 48.5
TAR629G1598 Trochodendron aralioides HOM05D005900 ORTHO05D007306 7.1e-38 161.8 212 46.7
GSVIVG01001102001 Vitis vinifera HOM05D005900 ORTHO05D007306 2.7e-37 159.8 202 45.5
vmacro15379 Vaccinium macrocarpon HOM05D005900 ORTHO05D007306 6.0e-37 158.7 225 44.9
Rhsim12G0016500 Rhododendron simsii HOM05D005900 ORTHO05D007306 1.3e-36 157.5 216 46.8
DCAR_030841 Daucus carota HOM05D005900 ORTHO05D007306 3.9e-36 156.0 187 47.1
QL03p048972 Quercus lobata HOM05D005900 ORTHO05D007306 3.3e-35 152.9 212 45.8
Sc06g0007790 Simmondsia chinensis HOM05D005900 ORTHO05D007306 7.4e-35 151.8 211 45.5
CiPaw.05G100400 Carya illinoinensis HOM05D005900 ORTHO05D007306 9.7e-35 151.4 212 47.2
Peaxi162Scf00079g01513 Petunia axillaris HOM05D005900 ORTHO05D007306 1.6e-34 150.6 233 45.1
Sabra01G0047700 Salix brachista HOM05D005900 ORTHO05D007306 2.8e-34 149.8 204 46.1
MBI11_g07033_MAGBIO Magnolia biondii HOM05D005900 ORTHO05D007306 3.7e-34 149.4 206 45.6
CsaV3_4G033440 Cucumis sativus L. HOM05D005900 ORTHO05D007306 6.3e-34 148.7 219 42.5
Atru.chr12.1436 Acer truncatum HOM05D005900 ORTHO05D007306 1.4e-33 147.5 206 43.7
PGR102G3094 Punica granatum HOM05D005900 ORTHO05D007306 1.8e-33 147.1 197 46.2
Hund20854 Selenicereus undatus HOM05D005900 ORTHO05D007306 2.4e-33 146.7 206 43.2
Ciclev10005823m.g Citrus clementina HOM05D005900 ORTHO05D007306 3.1e-33 146.4 194 44.8
FAN17G1441 Fragaria x ananassa HOM05D005900 ORTHO05D007306 3.1e-33 146.4 166 47.0
RcHm_v2.0_Chr4g0428761 Rosa chinensis HOM05D005900 ORTHO05D007306 1.2e-32 144.4 207 42.0
FvH4_4g22530 Fragaria vesca HOM05D005900 ORTHO05D007306 2.0e-32 143.7 199 42.2
FAN12G4206 Fragaria x ananassa HOM05D005900 ORTHO05D007306 2.0e-32 143.7 199 42.2
Gohir.A01G020300 Gossypium hirsutum HOM05D005900 ORTHO05D007306 2.0e-32 143.7 177 48.0
Cpa.g.sc36.199 Carica papaya HOM05D005900 ORTHO05D007306 2.6e-32 143.3 210 42.9
AUR62006518 Chenopodium quinoa HOM05D005900 ORTHO05D007306 2.6e-32 143.3 201 45.3
Potri.001G068500 Populus trichocarpa HOM05D005900 ORTHO05D007306 2.6e-32 143.3 204 44.1
Cfa010215 Carpinus fangiana HOM05D005900 ORTHO05D007306 4.5e-32 142.5 212 46.7
Prupe.1G213900 Prunus persica HOM05D005900 ORTHO05D007306 4.5e-32 142.5 211 46.4
Sed0015511 Sechium edule HOM05D005900 ORTHO05D007306 4.5e-32 142.5 217 44.2
FAN07G0479 Fragaria x ananassa HOM05D005900 ORTHO05D007306 7.6e-32 141.7 198 41.9
AUR62025013 Chenopodium quinoa HOM05D005900 ORTHO05D007306 1.0e-31 141.4 199 43.7
Cfa011664 Carpinus fangiana HOM05D005900 ORTHO05D007306 1.3e-31 141.0 212 45.8
ClCG11G017800 Citrullus lanatus HOM05D005900 ORTHO05D007306 1.3e-31 141.0 187 43.9
Eucgr.B02910 Eucalyptus grandis HOM05D005900 ORTHO05D007306 1.7e-31 140.6 206 41.7
Gorai.002G021100 Gossypium raimondii HOM05D005900 ORTHO05D007306 1.7e-31 140.6 177 47.5
Thecc.02G191100 Theobroma cacao HOM05D005900 ORTHO05D007306 1.7e-31 140.6 186 45.2
PSO170G6181 Papaver somniferum HOM05D005900 ORTHO05D007306 2.2e-31 140.2 188 47.9
CiPaw.03G184600 Carya illinoinensis HOM05D005900 ORTHO05D007306 5.0e-31 139.0 186 46.8
Gohir.D01G018900 Gossypium hirsutum HOM05D005900 ORTHO05D007306 5.0e-31 139.0 177 47.5
Haze_24259 Corylus avellana HOM05D005900 ORTHO05D007306 6.5e-31 138.7 211 45.5
Lsat_1_v5_gn_2_95001 Lactuca sativa HOM05D005900 ORTHO05D007306 3.2e-30 136.3 193 40.9
CDE09G0879 Ceratophyllum demersum HOM05D005900 ORTHO05D007306 9.3e-30 134.8 195 41.5
EL10Ac1g01696 Beta vulgaris HOM05D005900 ORTHO05D007306 2.7e-29 133.3 200 42.5
COL.COLO4_27171 Corchorus olitorius HOM05D005900 ORTHO05D007306 2.7e-29 133.3 179 44.7
Lalb_Chr15g0079851 Lupinus albus HOM05D005900 ORTHO05D007306 2.7e-29 133.3 179 43.6
PSO017G3279 Papaver somniferum HOM05D005900 ORTHO05D007306 7.9e-29 131.7 180 45.0
TWI18G0365 Tripterygium wilfordii HOM05D005900 ORTHO05D007306 7.9e-29 131.7 208 43.8
ECA238G4295 Erigeron canadensis HOM05D005900 ORTHO05D007306 3.9e-28 129.4 183 48.1
vmacro01013 Vaccinium macrocarpon HOM05D005900 ORTHO05D007306 5.1e-28 129.0 263 36.1
Medtr8g012410 Medicago truncatula HOM05D005900 ORTHO05D007306 4.3e-27 125.9 203 40.9
MD16G1142000 Malus domestica HOM05D005900 ORTHO05D007306 9.7e-27 124.8 198 43.9
Eucgr.E01503 Eucalyptus grandis HOM05D005900 ORTHO05D007306 1.6e-26 124.0 206 39.3
MD13G1131700 Malus domestica HOM05D005900 ORTHO05D007306 1.6e-26 124.0 198 44.4
Os01g0259900 Oryza sativa ssp. japonica HOM05D005900 ORTHO05D007306 2.8e-26 123.2 188 42.6
unitig_747.g21266 Utricularia gibba HOM05D005900 ORTHO05D007306 3.7e-26 122.9 230 37.0
Aa31LG1G17260 Aethionema arabicum HOM05D005900 ORTHO05D007306 1.4e-25 120.9 200 39.5
arahy.Tifrunner.gnm1.ann1.5NZU5R Arachis hypogaea HOM05D005900 ORTHO05D007306 1.4e-25 120.9 199 40.7
Ca_23210_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 1.8e-25 120.6 196 40.3
Ca_13888_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 4.1e-25 119.4 182 42.9
Os08g0422600 Oryza sativa ssp. japonica HOM05D005900 ORTHO05D007306 5.3e-25 119.0 185 39.5
arahy.Tifrunner.gnm1.ann1.UQH0GN Arachis hypogaea HOM05D005900 ORTHO05D007306 6.9e-25 118.6 219 39.3
Psat4g204640 Pisum sativum HOM05D005900 ORTHO05D007306 3.8e-23 112.8 177 40.1
THA.LOC104799437 Tarenaya hassleriana HOM05D005900 ORTHO05D007306 6.5e-23 112.1 186 39.8
Zm00001eb127900 Zea mays HOM05D005900 ORTHO05D007306 6.5e-23 112.1 213 36.2
C02p63500 Brassica napus HOM05D005900 ORTHO05D007306 8.5e-23 111.7 190 39.5
TPR.G16445 Trifolium pratense HOM05D005900 ORTHO05D007306 7.2e-22 108.6 186 37.6
BcaC03g18270 Brassica carinata HOM05D005900 ORTHO05D007306 9.4e-22 108.2 193 39.9
A02p43400 Brassica napus HOM05D005900 ORTHO05D007306 1.6e-21 107.5 190 40.0
Lj3g0021746 Lotus japonicus HOM05D005900 ORTHO05D007306 1.6e-21 107.5 199 39.7
BraA02t09265Z Brassica rapa HOM05D005900 ORTHO05D007306 3.6e-21 106.3 190 39.5
CSS0033783 Camellia sinensis var. sinensis HOM05D005900 ORTHO05D007306 4.6e-21 105.9 144 49.3
BolC2t12415H Brassica oleracea HOM05D005900 ORTHO05D007306 1.0e-20 104.8 194 39.2
Manes.08G100300 Manihot esculenta HOM05D005900 ORTHO05D007306 2.3e-20 103.6 160 39.4
VMungo0331G1117 Vigna mungo HOM05D005900 ORTHO05D007306 2.3e-20 103.6 190 41.6
VMungo0251G3272 Vigna mungo HOM05D005900 ORTHO05D007306 3.0e-20 103.2 178 42.1
Sp2g27740 Schrenkiella parvula HOM05D005900 ORTHO05D007306 5.1e-20 102.4 194 35.6
Duzib052G0736 Durio zibethinus HOM05D005900 ORTHO05D007306 6.7e-20 102.1 183 38.3
BcaC08g46818 Brassica carinata HOM05D005900 ORTHO05D007306 1.5e-19 100.9 145 39.3
BolC6t39862H Brassica oleracea HOM05D005900 ORTHO05D007306 2.0e-19 100.5 145 39.3
Glyma.07G200400 Glycine max HOM05D005900 ORTHO05D007306 2.0e-19 100.5 193 40.4
Lj6g0004130 Lotus japonicus HOM05D005900 ORTHO05D007306 2.0e-19 100.5 186 37.6
Aqoxy4G02969 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 4.4e-19 99.4 172 37.8
Thhalv10004934m.g Eutrema salsugineum HOM05D005900 ORTHO05D007306 5.7e-19 99.0 194 36.1
Glyma.13G175800 Glycine max HOM05D005900 ORTHO05D007306 5.7e-19 99.0 188 39.4
BcaB07g29751 Brassica carinata HOM05D005900 ORTHO05D007306 1.7e-18 97.4 207 36.2
C03p61480 Brassica napus HOM05D005900 ORTHO05D007306 3.1e-17 93.2 189 33.9
Ca_13890_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 3.4e-16 89.7 91 48.4
AL8G42100 Arabidopsis lyrata HOM05D005900 ORTHO05D007306 5.9e-16 89.0 197 31.0
Phvul.002G231200 Phaseolus vulgaris HOM05D005900 ORTHO05D007306 7.7e-16 88.6 194 39.7
Cc04_g15860 Coffea canephora HOM05D005900 ORTHO05D007306 1.3e-15 87.8 78 51.3
AT5G64680 Arabidopsis thaliana HOM05D005900 ORTHO05D007306 2.5e-14 83.6 180 33.3
BcaB04g19984 Brassica carinata HOM05D005900 ORTHO05D007306 6.1e-13 79.0 158 33.5
Atru.chr12.1335 Acer truncatum HOM05D005900 ORTHO05D007306 2.6e-11 73.6 71 50.7
Carub.0008s2548 Capsella rubella HOM05D005900 ORTHO05D007306 2.6e-11 73.6 184 32.6
MELO3C032361.2 Cucumis melo HOM05D005900 ORTHO05D007306 3.3e-11 73.2 168 37.5
Aqoxy83s001 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 9.7e-11 71.6 128 36.7
Aqoxy4G03322 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 1.3e-10 71.2 128 36.7
ATR0582G041 Amborella trichopoda HOM05D005900 ORTHO05D007306 3.7e-10 69.7 191 31.4
Aqoxy2G04193 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 1.7e-07 60.8 107 39.3
SEGI_10970 Sequoiadendron giganteum HOM05D005900 ORTHO05D007306 2.2e-07 60.5 188 27.7
Nn3g20876 Nelumbo nucifera HOM05D005900 ORTHO05D007306 6.5e-07 58.9 57 50.9
CARHR278660 Cardamine hirsuta HOM05D005900 ORTHO05D007306 2.5e-06 57.0 161 29.2


User provided reference genes

Program Settings