Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow2G0118 Salvia bowleyana HOM05D001304 ORTHO05D008890 2.1e-124 449.1 238 100.0
MSTRG.7966 Avicennia marina HOM05D001304 ORTHO05D008890 9.7e-98 360.5 224 80.4
SGA_v2.0_scaffold484G52361 Striga asiatica HOM05D001304 ORTHO05D008890 6.3e-97 357.8 233 79.4
Cc11_g16390 Coffea canephora HOM05D001304 ORTHO05D008890 2.5e-93 345.9 226 77.0
Migut.K00680 Erythranthe guttata HOM05D001304 ORTHO05D008890 4.7e-92 341.7 236 76.7
unitig_8.g2912 Utricularia gibba HOM05D000468 ORTHO05D008890 1.1e-90 337.0 226 77.0
Oeu020321.1 Olea europaea HOM05D001304 ORTHO05D008890 2.8e-89 332.4 225 74.7
Glyma.11G246700 Glycine max HOM05D001304 ORTHO05D008890 1.6e-87 326.6 233 71.2
Nitab4.5_0000041g0390 Nicotiana tabacum HOM05D001304 ORTHO05D008890 1.0e-86 323.9 224 73.7
Manes.12G017100 Manihot esculenta HOM05D001304 ORTHO05D008890 1.7e-86 323.2 227 71.8
PGR119G0865 Punica granatum HOM05D001304 ORTHO05D008890 3.8e-86 322.0 230 70.9
PGSC0003DMG400017453 Solanum tuberosum HOM05D001304 ORTHO05D008890 1.9e-85 319.7 226 73.5
arahy.Tifrunner.gnm1.ann1.VHC2JK Arachis hypogaea HOM05D001304 ORTHO05D008890 2.5e-85 319.3 231 70.6
Ciclev10032669m.g Citrus clementina HOM05D001304 ORTHO05D008890 2.5e-85 319.3 223 70.9
Sp5g22690 Schrenkiella parvula HOM05D001304 ORTHO05D008890 4.2e-85 318.5 222 70.3
Dinv11009 Davidia involucrata HOM05D001304 ORTHO05D008890 7.2e-85 317.8 229 71.2
Thhalv10019020m.g Eutrema salsugineum HOM05D001304 ORTHO05D008890 7.2e-85 317.8 222 69.8
COL.COLO4_23565 Corchorus olitorius HOM05D001304 ORTHO05D008890 9.4e-85 317.4 229 71.2
VMungo1383G0240 Vigna mungo HOM05D001304 ORTHO05D008890 9.4e-85 317.4 225 71.6
Peaxi162Scf00128g00729 Petunia axillaris HOM05D001304 ORTHO05D008890 1.2e-84 317.0 227 74.9
Ca_16494_v3 Cicer arietinum L. HOM05D001304 ORTHO05D008890 1.6e-84 316.6 218 75.7
FvH4_4g24830 Fragaria vesca HOM05D001304 ORTHO05D008890 2.1e-84 316.2 225 70.2
FAN07G1515 Fragaria x ananassa HOM05D001304 ORTHO05D008890 2.1e-84 316.2 225 70.2
FAN12G0763 Fragaria x ananassa HOM05D001304 ORTHO05D008890 2.1e-84 316.2 225 70.2
FAN22G1346 Fragaria x ananassa HOM05D001304 ORTHO05D008890 2.1e-84 316.2 225 70.2
BcaC08g46045 Brassica carinata HOM05D001304 ORTHO05D008890 2.7e-84 315.8 226 69.9
A07p32450 Brassica napus HOM05D001304 ORTHO05D008890 2.7e-84 315.8 225 69.8
C06p38480 Brassica napus HOM05D001304 ORTHO05D008890 2.7e-84 315.8 226 69.9
BraA07t30869Z Brassica rapa HOM05D001304 ORTHO05D008890 2.7e-84 315.8 225 69.8
Solyc05g014310.3 Solanum lycopersicum HOM05D001304 ORTHO05D008890 4.7e-84 315.1 226 72.1
TWI36G0586 Tripterygium wilfordii HOM05D001304 ORTHO05D008890 4.7e-84 315.1 225 71.6
BcaB03g15175 Brassica carinata HOM05D001304 ORTHO05D008890 6.1e-84 314.7 221 70.1
BcaC08g46187 Brassica carinata HOM05D001304 ORTHO05D008890 1.0e-83 313.9 222 69.8
C06p42370 Brassica napus HOM05D001304 ORTHO05D007800 1.0e-83 313.9 222 69.8
Carub.0002s1413 Capsella rubella HOM05D001304 ORTHO05D008890 1.0e-83 313.9 224 70.5
AUR62005553 Chenopodium quinoa HOM05D001304 ORTHO05D008890 1.0e-83 313.9 225 69.3
Sopen05g009420 Solanum pennellii HOM05D001304 ORTHO05D008890 1.4e-83 313.5 226 72.6
FAN17G2678 Fragaria x ananassa HOM05D001304 ORTHO05D008890 1.8e-83 313.2 225 69.8
AUR62024180 Chenopodium quinoa HOM05D001304 ORTHO05D008890 3.0e-83 312.4 225 68.9
AT1G67700 Arabidopsis thaliana HOM05D001304 ORTHO05D008890 5.2e-83 311.6 224 69.6
CsaV3_2G025190 Cucumis sativus L. HOM05D001304 ORTHO05D008890 5.2e-83 311.6 231 70.1
AL2G26400 Arabidopsis lyrata HOM05D001304 ORTHO05D008890 6.7e-83 311.2 224 69.6
Eucgr.H04690 Eucalyptus grandis HOM05D001304 ORTHO05D008890 1.5e-82 310.1 233 68.2
Phvul.001G258300 Phaseolus vulgaris HOM05D001304 ORTHO05D008890 1.5e-82 310.1 222 70.3
THA.LOC104825532 Tarenaya hassleriana HOM05D001304 ORTHO05D008890 1.5e-82 310.1 226 70.4
Actinidia15135 Actinidia chinensis HOM05D001304 ORTHO05D008890 2.0e-82 309.7 222 69.8
RcHm_v2.0_Chr4g0431911 Rosa chinensis HOM05D001304 ORTHO05D008890 3.3e-82 308.9 229 67.2
TAR622G1249 Trochodendron aralioides HOM05D001304 ORTHO05D008890 5.7e-82 308.1 225 67.6
Gohir.D04G181000 Gossypium hirsutum HOM05D001304 ORTHO05D008890 7.5e-82 307.8 235 66.8
Sed0004969 Sechium edule HOM05D001304 ORTHO05D008890 7.5e-82 307.8 227 67.8
Potri.010G053600 Populus trichocarpa HOM05D001304 ORTHO05D008890 1.3e-81 307.0 229 69.0
EL10As2g23248 Beta vulgaris HOM05D001304 ORTHO05D008890 2.8e-81 305.8 227 67.0
Prupe.1G237600 Prunus persica HOM05D001304 ORTHO05D008890 6.3e-81 304.7 225 68.0
Sc04g0009800 Simmondsia chinensis HOM05D001304 ORTHO05D008890 1.8e-80 303.1 225 69.8
Haze_12318 Corylus avellana HOM05D001304 ORTHO05D008890 3.1e-80 302.4 229 67.2
Aa31LG4G12100 Aethionema arabicum HOM05D001304 ORTHO05D008890 5.3e-80 301.6 227 67.8
Nitab4.5_0001318g0090 Nicotiana tabacum HOM05D001304 ORTHO05D008890 2.7e-79 299.3 224 72.3
CARHR060290 Cardamine hirsuta HOM05D001304 ORTHO05D008890 3.5e-79 298.9 228 66.2
BolC6t39193H Brassica oleracea HOM05D001304 ORTHO05D007800 5.9e-79 298.1 251 61.8
Cfa009288 Carpinus fangiana HOM05D001304 ORTHO05D008890 5.9e-79 298.1 215 68.8
MD13G1108600 Malus domestica HOM05D001304 ORTHO05D008890 5.9e-79 298.1 230 65.2
Sabra10G0017000 Salix brachista HOM05D001304 ORTHO05D008890 5.9e-79 298.1 222 68.5
Ah.02g130500 Amaranthus hybridus HOM05D001304 ORTHO05D008890 5.0e-78 295.0 202 70.8
CANSAT01G0179 Cannabis sativa HOM05D001304 ORTHO05D008890 1.9e-77 293.1 227 66.5
PSO063G7645 Papaver somniferum HOM05D001304 ORTHO05D008890 4.2e-77 292.0 226 62.8
Atru.chr11.2216 Acer truncatum HOM05D001304 ORTHO05D008890 5.5e-77 291.6 200 73.5
PSO782G0777 Papaver somniferum HOM05D001304 ORTHO05D008890 7.2e-77 291.2 226 62.8
Rhsim12G0107100 Rhododendron simsii HOM05D001304 ORTHO05D008890 7.2e-77 291.2 226 66.8
Aqoxy5G03572 Aquilegia oxysepala HOM05D001304 ORTHO05D008890 6.1e-76 288.1 223 64.1
Gohir.A04G137800 Gossypium hirsutum HOM05D001304 ORTHO05D008890 2.6e-74 282.7 235 63.0
Hund06057 Selenicereus undatus HOM05D001304 ORTHO05D008890 9.8e-74 280.8 227 63.4
CiPaw.05G174500 Carya illinoinensis HOM05D001304 ORTHO05D008890 1.7e-73 280.0 179 74.3
CDE02G1129 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 3.7e-73 278.9 227 63.9
Gorai.012G174200 Gossypium raimondii HOM05D001304 ORTHO05D008890 9.1e-72 274.2 235 61.3
Lj6g0017703 Lotus japonicus HOM05D001304 ORTHO05D008890 2.9e-70 269.2 230 63.0
Thecc.02G270700 Theobroma cacao HOM05D001304 ORTHO05D008890 8.6e-70 267.7 232 60.8
ATR0824G252 Amborella trichopoda HOM05D001304 ORTHO05D008890 3.3e-69 265.8 238 60.9
ECA233G5962 Erigeron canadensis HOM05D000468 ORTHO05D000548 7.2e-69 264.6 183 70.5
Cpa.g.c30628.2 Carica papaya HOM05D001304 ORTHO05D008890 9.5e-69 264.2 225 62.2
Lalb_Chr08g0230761 Lupinus albus HOM05D001304 ORTHO05D008890 2.1e-68 263.1 229 61.1
Duzib251G0230 Durio zibethinus HOM05D001304 ORTHO05D008890 2.8e-68 262.7 234 61.1
CDE09G0600 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 8.0e-68 261.2 227 62.1
Lj6C819T3 Lonicera japonica HOM05D001304 ORTHO05D008890 1.2e-66 257.3 174 74.1
HanXRQChr08g0207321 Helianthus annuus HOM05D001304 ORTHO05D008890 1.8e-64 250.0 229 59.0
Actinidia24567 Actinidia chinensis HOM05D001304 ORTHO05D008890 1.6e-63 246.9 222 58.1
CDE04G1632 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 5.9e-63 245.0 228 55.3
TPR.G33410 Trifolium pratense HOM05D001304 ORTHO05D008890 6.6e-62 241.5 227 58.6
HPP92_004594 Vanilla planifolia HOM05D001304 ORTHO05D008890 1.9e-61 240.0 167 69.5
Medtr3g086040 Medicago truncatula HOM05D001304 ORTHO05D008890 6.1e-60 235.0 226 58.0
Lsat_1_v5_gn_8_150960 Lactuca sativa HOM05D001304 ORTHO05D008890 1.8e-59 233.4 228 56.1
Os02g0600200 Oryza sativa ssp. japonica HOM05D001304 ORTHO05D008890 2.3e-59 233.0 193 62.7
Hma1.2p1_0079F.1_g041530 Hydrangea macrophylla HOM05D001304 ORTHO05D008890 2.0e-58 229.9 225 57.8
Zm00001eb246340 Zea mays HOM05D001304 ORTHO05D008890 2.0e-58 229.9 196 60.7
GSVIVG01010306001 Vitis vinifera HOM05D001304 ORTHO05D008890 1.5e-53 213.8 134 76.9
CSS0032412 Camellia sinensis var. sinensis HOM05D000063 ORTHO05D008721 4.3e-53 212.2 127 81.1
vmacro16148 Vaccinium macrocarpon HOM05D001304 ORTHO05D008890 1.2e-50 204.1 135 76.3
TAR629G1650 Trochodendron aralioides HOM05D001304 ORTHO05D008890 2.6e-50 203.0 133 74.4
MELO3C010716.2 Cucumis melo HOM05D001304 ORTHO05D008890 6.4e-49 198.4 136 71.3
arahy.Tifrunner.gnm1.ann1.Q18UTF Arachis hypogaea HOM05D001304 ORTHO05D008890 1.5e-45 187.2 231 49.8
AagrBONN_evm.TU.Sc2ySwM_368.469 Anthoceros agrestis HOM05D001304 ORTHO05D008890 1.4e-43 180.6 182 50.0
BolC6t38945H Brassica oleracea HOM05D001304 ORTHO05D008890 6.8e-43 178.3 122 74.6
Psat5g093920 Pisum sativum HOM05D001304 ORTHO05D008890 6.8e-43 178.3 95 89.5
Pp3c14_9580 Physcomitrium patens HOM05D001304 ORTHO05D008890 8.9e-43 177.9 180 51.1
SEGI_40444 Sequoiadendron giganteum HOM05D001304 ORTHO05D008890 4.9e-41 172.2 186 49.5
Mapoly0101s0039 Marchantia polymorpha HOM05D001304 ORTHO05D008890 2.5e-37 159.8 192 44.3
CBR_g28672 Chara braunii HOM05D001304 ORTHO05D008890 1.1e-35 154.5 207 44.0
DCAR_026486 Daucus carota HOM05D000468 ORTHO05D008890 8.9e-35 151.4 135 59.3
Duzib248G0877 Durio zibethinus HOM05D001304 ORTHO05D008890 8.9e-35 151.4 224 42.9
Cfa021197 Carpinus fangiana HOM05D001304 ORTHO05D008890 2.4e-32 143.3 136 58.1
SMO367G0665 Selaginella moellendorffii HOM05D001304 ORTHO05D008890 4.7e-28 129.0 165 40.6
MBI06_g05241_MAGBIO Magnolia biondii HOM05D001304 ORTHO05D008890 2.4e-24 116.7 229 38.0
ClCG08G017440 Citrullus lanatus HOM05D001304 ORTHO05D008890 5.4e-24 115.5 90 62.2
Oeu009356.1 Olea europaea HOM05D001304 ORTHO05D008890 9.6e-21 104.8 57 87.7
vmacro16147 Vaccinium macrocarpon HOM05D001304 ORTHO05D008890 7.6e-18 95.1 91 50.5
MCO01G115 Micromonas commoda HOM05D001304 ORTHO05D008890 3.7e-12 76.3 204 27.5
PRCOL_00000361 Prasinoderma coloniale HOM05D001304 ORTHO05D008890 4.8e-12 75.9 156 25.0
Ah.03g133980 Amaranthus hybridus HOM05D007778 ORTHO05D009819 2.0e-10 70.5 154 34.4
Cre03.g146167 Chlamydomonas reinhardtii HOM05D001304 ORTHO05D008890 1.7e-09 67.4 182 28.0


User provided reference genes

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