Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow1G8229 Salvia bowleyana HOM05D006693 ORTHO05D008092 0.0e+00 3132.4 1553 100.0
Migut.A00715 Erythranthe guttata HOM05D006693 ORTHO05D008092 0.0e+00 2054.3 1557 69.0
MSTRG.11217 Avicennia marina HOM05D006693 ORTHO05D008092 0.0e+00 1963.0 1505 68.3
SGA_v2.0_scaffold173G39133 Striga asiatica HOM05D006693 ORTHO05D008092 0.0e+00 1946.8 1552 66.1
Dinv38897 Davidia involucrata HOM05D006693 ORTHO05D008092 0.0e+00 1712.6 1582 57.2
GSVIVG01019421001 Vitis vinifera HOM05D006693 ORTHO05D008092 0.0e+00 1639.0 1566 55.2
CSS0002391 Camellia sinensis var. sinensis HOM05D006693 ORTHO05D008092 0.0e+00 1634.4 1572 56.0
Rhsim07G0087200 Rhododendron simsii HOM05D006693 ORTHO05D008092 0.0e+00 1593.9 1604 54.4
Oeu059571.2 Olea europaea HOM05D006693 ORTHO05D008092 0.0e+00 1592.8 1589 56.1
Cc08_g15300 Coffea canephora HOM05D006693 ORTHO05D008092 0.0e+00 1567.0 1570 55.0
Cfa012249 Carpinus fangiana HOM05D006693 ORTHO05D008092 0.0e+00 1566.6 1573 54.9
Sopen08g029940 Solanum pennellii HOM05D006693 ORTHO05D008092 0.0e+00 1561.6 1565 54.1
Lj2A178T45 Lonicera japonica HOM05D006693 ORTHO05D008092 0.0e+00 1560.0 1586 54.1
QL02p033351 Quercus lobata HOM05D006693 ORTHO05D008092 0.0e+00 1556.6 1576 54.6
CiPaw.12G089000 Carya illinoinensis HOM05D006693 ORTHO05D008092 0.0e+00 1544.3 1576 54.6
PGSC0003DMG400012182 Solanum tuberosum HOM05D006693 ORTHO05D008092 0.0e+00 1540.8 1562 53.5
Peaxi162Scf00074g01720 Petunia axillaris HOM05D006693 ORTHO05D008092 0.0e+00 1540.0 1574 53.1
Duzib205G0177 Durio zibethinus HOM05D006693 ORTHO05D008092 0.0e+00 1522.7 1572 53.4
Potri.001G098700 Populus trichocarpa HOM05D006693 ORTHO05D008092 0.0e+00 1522.7 1561 53.2
FvH4_5g03240 Fragaria vesca HOM05D006693 ORTHO05D008092 0.0e+00 1519.6 1565 53.7
MD06G1091700 Malus domestica HOM05D006693 ORTHO05D008092 0.0e+00 1519.6 1583 53.6
Prupe.5G106900 Prunus persica HOM05D006693 ORTHO05D008092 0.0e+00 1510.4 1494 56.5
Atru.chr9.2109 Acer truncatum HOM05D006693 ORTHO05D008092 0.0e+00 1507.3 1577 53.5
vmacro13975 Vaccinium macrocarpon HOM05D006693 ORTHO05D008092 0.0e+00 1507.3 1549 53.5
Potri.003G132900 Populus trichocarpa HOM05D006693 ORTHO05D008092 0.0e+00 1505.3 1581 52.4
Ciclev10018484m.g Citrus clementina HOM05D006693 ORTHO05D008092 0.0e+00 1501.9 1579 53.2
Lsat_1_v5_gn_6_84960 Lactuca sativa HOM05D006693 ORTHO05D008092 0.0e+00 1501.9 1562 52.4
Thecc.03G286900 Theobroma cacao HOM05D006693 ORTHO05D008092 0.0e+00 1501.9 1570 53.2
DCAR_008351 Daucus carota HOM05D006693 ORTHO05D008092 0.0e+00 1496.5 1504 54.0
Gorai.003G085400 Gossypium raimondii HOM05D006693 ORTHO05D008092 0.0e+00 1489.6 1571 52.8
RcHm_v2.0_Chr7g0196531 Rosa chinensis HOM05D006693 ORTHO05D008092 0.0e+00 1488.4 1540 54.1
FAN04G0987 Fragaria x ananassa HOM05D006693 ORTHO05D008092 0.0e+00 1487.6 1580 52.6
Gohir.D03G078700 Gossypium hirsutum HOM05D006693 ORTHO05D008092 0.0e+00 1484.2 1571 52.6
FAN18G3090 Fragaria x ananassa HOM05D006693 ORTHO05D008092 0.0e+00 1481.8 1666 50.6
Sabra03G0095200 Salix brachista HOM05D006693 ORTHO05D008092 0.0e+00 1481.5 1586 52.1
Solyc08g081640.3 Solanum lycopersicum HOM05D006693 ORTHO05D008092 0.0e+00 1478.0 1551 52.9
Manes.02G016800 Manihot esculenta HOM05D006693 ORTHO05D008092 0.0e+00 1477.2 1513 53.9
Nn6g32458 Nelumbo nucifera HOM05D006693 ORTHO05D008092 0.0e+00 1473.4 1571 52.1
Aqoxy5G04083 Aquilegia oxysepala HOM05D006693 ORTHO05D008092 0.0e+00 1466.8 1583 51.4
HanXRQChr03g0085981 Helianthus annuus HOM05D006693 ORTHO05D008092 0.0e+00 1462.2 1560 51.3
Haze_08752 Corylus avellana HOM05D006693 ORTHO05D008092 0.0e+00 1452.6 1609 51.5
PSO170G0731 Papaver somniferum HOM05D006693 ORTHO05D008092 0.0e+00 1446.8 1580 50.8
PSO063G3881 Papaver somniferum HOM05D006693 ORTHO05D008092 0.0e+00 1444.1 1580 50.8
TAR629G1282 Trochodendron aralioides HOM05D006693 ORTHO05D008092 0.0e+00 1443.7 1438 54.7
FAN13G0718 Fragaria x ananassa HOM05D006693 ORTHO05D008092 0.0e+00 1430.2 1661 49.7
Lj4g0019588 Lotus japonicus HOM05D006693 ORTHO05D008092 0.0e+00 1428.3 1561 51.2
Glyma.08G018400 Glycine max HOM05D006693 ORTHO05D008092 0.0e+00 1425.2 1565 50.8
Eucgr.D01808 Eucalyptus grandis HOM05D006693 ORTHO05D008092 0.0e+00 1421.4 1564 50.9
FAN04G3090 Fragaria x ananassa HOM05D006693 ORTHO05D008092 0.0e+00 1421.0 1581 50.8
PGR031G3028 Punica granatum HOM05D006693 ORTHO05D008092 0.0e+00 1419.1 1578 51.1
Glyma.05G212000 Glycine max HOM05D006693 ORTHO05D008092 0.0e+00 1415.6 1571 50.5
VMungo0251G0136 Vigna mungo HOM05D006693 ORTHO05D008092 0.0e+00 1412.9 1566 50.5
Phvul.002G293300 Phaseolus vulgaris HOM05D006693 ORTHO05D008092 0.0e+00 1410.2 1573 50.3
MBI06_g33534_MAGBIO Magnolia biondii HOM05D006693 ORTHO05D008092 0.0e+00 1409.4 1617 49.4
MELO3C016336.2 Cucumis melo HOM05D006693 ORTHO05D008092 0.0e+00 1406.0 1578 49.5
Psat7g029760 Pisum sativum HOM05D006693 ORTHO05D008092 0.0e+00 1406.0 1567 50.4
TPR.G12950 Trifolium pratense HOM05D006693 ORTHO05D008092 0.0e+00 1405.2 1574 50.8
Medtr8g098950 Medicago truncatula HOM05D006693 ORTHO05D008092 0.0e+00 1402.5 1563 50.5
arahy.Tifrunner.gnm1.ann1.ILCZ5C Arachis hypogaea HOM05D006693 ORTHO05D008092 0.0e+00 1400.2 1575 49.5
arahy.Tifrunner.gnm1.ann1.U3KDBF Arachis hypogaea HOM05D006693 ORTHO05D008092 0.0e+00 1394.8 1578 49.6
Sc07g0009850 Simmondsia chinensis HOM05D006693 ORTHO05D008092 0.0e+00 1392.9 1567 49.6
Lalb_Chr16g0390281 Lupinus albus HOM05D006693 ORTHO05D008092 0.0e+00 1383.6 1575 50.0
A09p27880 Brassica napus HOM05D006693 ORTHO05D008092 0.0e+00 1379.8 1569 48.9
BcaB01g01624 Brassica carinata HOM05D006693 ORTHO05D008092 0.0e+00 1375.9 1564 48.9
Sp6g06170 Schrenkiella parvula HOM05D006693 ORTHO05D008092 0.0e+00 1375.9 1571 49.1
ECA240G0689 Erigeron canadensis HOM05D006693 ORTHO05D008092 0.0e+00 1372.1 1560 49.2
BraA09t38356Z Brassica rapa HOM05D006693 ORTHO05D008092 0.0e+00 1368.6 1588 48.4
BcaC04g21124 Brassica carinata HOM05D006693 ORTHO05D008092 0.0e+00 1367.8 1580 48.9
C09p35290 Brassica napus HOM05D006693 ORTHO05D008092 0.0e+00 1367.8 1580 48.9
Ca_10951_v3 Cicer arietinum L. HOM05D006693 ORTHO05D008092 0.0e+00 1361.3 1556 49.7
BolC9t56372H Brassica oleracea HOM05D006693 ORTHO05D008092 0.0e+00 1357.8 1599 48.3
AL6G45650 Arabidopsis lyrata HOM05D006693 ORTHO05D008092 0.0e+00 1356.3 1577 48.9
Thhalv10028363m.g Eutrema salsugineum HOM05D006693 ORTHO05D008092 0.0e+00 1350.5 1567 48.6
Hund14266 Selenicereus undatus HOM05D006693 ORTHO05D008092 0.0e+00 1348.2 1553 49.2
EL10Ac5g12841 Beta vulgaris HOM05D006693 ORTHO05D008092 0.0e+00 1345.1 1552 49.2
AUR62010757 Chenopodium quinoa HOM05D006693 ORTHO05D008092 0.0e+00 1343.6 1570 48.0
THA.LOC104814738 Tarenaya hassleriana HOM05D006693 ORTHO05D008092 0.0e+00 1342.0 1570 48.0
Lalb_Chr05g0224471 Lupinus albus HOM05D006693 ORTHO05D008092 0.0e+00 1336.2 1563 48.6
Carub.0006s3015 Capsella rubella HOM05D006693 ORTHO05D008092 0.0e+00 1332.8 1598 47.2
AUR62019758 Chenopodium quinoa HOM05D006693 ORTHO05D008092 0.0e+00 1323.9 1572 47.8
AT4G11270 Arabidopsis thaliana HOM05D006693 ORTHO05D008092 0.0e+00 1318.9 1576 47.7
Ah.12g051930 Amaranthus hybridus HOM05D006693 ORTHO05D008092 0.0e+00 1314.3 1559 47.4
Aa31LG9G10920 Aethionema arabicum HOM05D006693 ORTHO05D008092 0.0e+00 1308.1 1638 46.3
Gohir.A02G105100 Gossypium hirsutum HOM05D006693 ORTHO05D008092 0.0e+00 1290.8 1405 52.1
ATR0721G120 Amborella trichopoda HOM05D006693 ORTHO05D008092 0.0e+00 1279.6 1633 45.9
Actinidia27362 Actinidia chinensis HOM05D006693 ORTHO05D008092 0.0e+00 1256.5 1395 51.6
Sed0010800 Sechium edule HOM05D006693 ORTHO05D008092 0.0e+00 1246.9 1424 48.9
CDE02G1190 Ceratophyllum demersum HOM05D006693 ORTHO05D008092 0.0e+00 1207.6 1569 45.0
HPP92_021742 Vanilla planifolia HOM05D006693 ORTHO05D008092 0.0e+00 1178.7 1605 43.8
ClCG07G007830 Citrullus lanatus HOM05D006693 ORTHO05D008092 0.0e+00 1177.9 1377 48.3
Nitab4.5_0007163g0010 Nicotiana tabacum HOM05D006693 ORTHO05D008092 0.0e+00 1168.7 1176 54.4
CsaV3_4G006130 Cucumis sativus L. HOM05D006693 ORTHO05D008092 0.0e+00 1159.1 1354 48.6
AL6G45560 Arabidopsis lyrata HOM05D006693 ORTHO05D008092 0.0e+00 1133.6 1474 45.2
Nitab4.5_0014092g0010 Nicotiana tabacum HOM05D006693 ORTHO05D008092 0.0e+00 1098.2 1151 53.8
Zm00001eb382730 Zea mays HOM05D006693 ORTHO05D008092 0.0e+00 1090.5 1591 41.2
AagrBONN_evm.TU.Sc2ySwM_368.1009 Anthoceros agrestis HOM05D006693 ORTHO05D008092 8.2e-246 855.1 1671 35.1
COL.COLO4_08357 Corchorus olitorius HOM05D006693 ORTHO05D008092 1.9e-242 844.0 1012 46.8
CARHR255320 Cardamine hirsuta HOM05D006693 ORTHO05D008092 1.2e-188 665.2 842 44.7
SMO358G0585 Selaginella moellendorffii HOM05D006693 ORTHO05D008092 8.4e-174 615.9 1543 29.6
COL.COLO4_08358 Corchorus olitorius HOM05D006693 ORTHO05D008092 4.0e-168 597.0 519 62.6
Actinidia33729 Actinidia chinensis HOM05D006693 ORTHO05D008092 5.2e-168 596.7 519 64.0
SEGI_35152 Sequoiadendron giganteum HOM05D006693 ORTHO05D008092 7.4e-146 523.1 1040 34.4
Os06g0331300 Oryza sativa ssp. japonica HOM05D006693 ORTHO05D008092 1.7e-129 468.8 720 38.9
Cpa.g.sc180.1 Carica papaya HOM05D006693 ORTHO05D008092 4.4e-98 364.4 410 50.2
SEGI_07995 Sequoiadendron giganteum HOM05D006693 ORTHO05D008092 4.3e-69 268.1 610 30.7
FAN08G3186 Fragaria x ananassa HOM05D006693 ORTHO05D008092 1.6e-52 213.0 182 58.8
Cpa.g.sc180.2 Carica papaya HOM05D006693 ORTHO05D008092 1.6e-36 159.8 167 55.1
ClCG07G007840 Citrullus lanatus HOM05D006693 ORTHO05D008092 3.0e-30 139.0 139 51.1
Cpa.g.c42974 Carica papaya HOM05D006693 ORTHO05D008092 6.9e-27 127.9 80 71.2
Actinidia27361 Actinidia chinensis HOM05D006693 ORTHO05D008092 2.6e-26 125.9 76 75.0
Cpa.g.sc180.5 Carica papaya HOM05D006693 ORTHO05D008092 1.6e-23 116.7 122 50.8
Cpa.g.sc180.3 Carica papaya HOM05D006693 ORTHO05D008092 2.1e-23 116.3 81 74.1
CAN.G532.47 Capsicum annuum HOM05D006693 ORTHO05D008092 2.7e-23 115.9 89 58.4
SEGI_11223 Sequoiadendron giganteum HOM05D006693 ORTHO05D008092 3.5e-23 115.5 95 61.1
SEGI_38420 Sequoiadendron giganteum HOM05D006693 ORTHO05D008092 3.5e-23 115.5 95 61.1
Actinidia33728 Actinidia chinensis HOM05D006693 ORTHO05D008092 1.7e-17 96.7 67 71.6
Sabra01G0074000 Salix brachista HOM05D000115 ORTHO05D000464 5.1e-06 58.5 71 50.7


User provided reference genes

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