Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow1G7260 Salvia bowleyana HOM05D006501 ORTHO05D008241 4.6e-106 387.9 192 100.0
SalBow1G8172 Salvia bowleyana HOM05D006501 ORTHO05D008241 4.6e-106 387.9 192 100.0
MSTRG.25662 Avicennia marina HOM05D006501 ORTHO05D008241 3.2e-67 258.8 199 70.9
Oeu009949.1 Olea europaea HOM05D006501 ORTHO05D008241 5.1e-57 224.9 201 62.2
SGA_v2.0_scaffold305G47943 Striga asiatica HOM05D006501 ORTHO05D008241 1.5e-56 223.4 212 60.8
Migut.A00672 Erythranthe guttata HOM05D006501 ORTHO05D008241 4.5e-53 211.8 199 60.8
GSVIVG01019510001 Vitis vinifera HOM05D006501 ORTHO05D003403 4.2e-51 205.3 169 64.5
Rhsim07G0083200 Rhododendron simsii HOM05D006501 ORTHO05D008241 1.6e-50 203.4 189 61.4
CSS0007891 Camellia sinensis var. sinensis HOM05D006501 ORTHO05D008241 2.1e-50 203.0 192 59.4
MBI07_g24349_MAGBIO Magnolia biondii HOM05D006501 ORTHO05D008241 2.7e-50 202.6 138 73.2
BcaB07g31511 Brassica carinata HOM05D006501 ORTHO05D008241 6.1e-50 201.4 139 74.1
vmacro13905 Vaccinium macrocarpon HOM05D006501 ORTHO05D008241 7.9e-50 201.1 145 71.7
Manes.02G011600 Manihot esculenta HOM05D006501 ORTHO05D008241 1.0e-49 200.7 144 74.3
unitig_46.g18618 Utricularia gibba HOM05D006501 ORTHO05D008241 1.0e-49 200.7 168 63.7
ClCG01G001980 Citrullus lanatus HOM05D006501 ORTHO05D008241 2.3e-49 199.5 170 62.9
Nitab4.5_0002944g0130 Nicotiana tabacum HOM05D006501 ORTHO05D008241 3.9e-49 198.7 137 73.7
Haze_08636 Corylus avellana HOM05D006501 ORTHO05D008241 5.1e-49 198.4 116 84.5
Dinv37544 Davidia involucrata HOM05D006501 ORTHO05D008241 5.1e-49 198.4 137 74.5
Duzib205G0456 Durio zibethinus HOM05D006501 ORTHO05D008241 5.1e-49 198.4 125 78.4
Actinidia22724 Actinidia chinensis HOM05D006501 ORTHO05D008241 8.8e-49 197.6 144 70.8
CsaV3_5G002110 Cucumis sativus L. HOM05D006501 ORTHO05D008241 1.5e-48 196.8 139 72.7
Actinidia27329 Actinidia chinensis HOM05D006501 ORTHO05D008241 2.0e-48 196.4 142 72.5
Sopen08g004120 Solanum pennellii HOM05D006501 ORTHO05D008241 2.0e-48 196.4 154 66.9
MELO3C005743.2 Cucumis melo HOM05D006501 ORTHO05D008241 2.6e-48 196.1 138 73.2
Cpa.g.sc79.61 Carica papaya HOM05D006501 ORTHO05D008241 3.3e-48 195.7 131 74.0
FAN04G2094 Fragaria x ananassa HOM05D006501 ORTHO05D008241 5.7e-48 194.9 131 77.1
PGSC0003DMG400005788 Solanum tuberosum HOM05D006501 ORTHO05D008241 5.7e-48 194.9 154 66.2
Thecc.03G294700 Theobroma cacao HOM05D006501 ORTHO05D008241 5.7e-48 194.9 133 75.9
A09p14290 Brassica napus HOM05D006501 ORTHO05D008241 7.4e-48 194.5 121 78.5
C09p17200 Brassica napus HOM05D006501 ORTHO05D008241 7.4e-48 194.5 121 78.5
CANSAT21G0520 Cannabis sativa HOM05D006501 ORTHO05D008241 9.7e-48 194.1 165 61.8
Solyc08g008270.4 Solanum lycopersicum HOM05D006501 ORTHO05D008241 9.7e-48 194.1 154 66.2
DCAR_005033 Daucus carota HOM05D006501 ORTHO05D008241 1.3e-47 193.7 155 67.1
BraA09t37076Z Brassica rapa HOM05D006501 ORTHO05D008241 1.7e-47 193.4 153 66.7
FAN08G0187 Fragaria x ananassa HOM05D006501 ORTHO05D008241 2.2e-47 193.0 131 76.3
FAN18G4356 Fragaria x ananassa HOM05D006501 ORTHO05D008241 2.2e-47 193.0 131 76.3
Aa31LG2G1320 Aethionema arabicum HOM05D005266 ORTHO05D006416 2.8e-47 192.6 117 81.2
CiPaw.11G123100 Carya illinoinensis HOM05D006501 ORTHO05D008241 2.8e-47 192.6 102 91.2
BcaB07g31509 Brassica carinata HOM05D006501 ORTHO05D008241 3.7e-47 192.2 136 69.9
CAN.G792.46 Capsicum annuum HOM05D006501 ORTHO05D008241 3.7e-47 192.2 154 64.9
Nitab4.5_0006656g0030 Nicotiana tabacum HOM05D006501 ORTHO05D008241 3.7e-47 192.2 143 71.3
FAN13G2672 Fragaria x ananassa HOM05D006501 ORTHO05D008241 4.8e-47 191.8 131 75.6
BcaC04g22628 Brassica carinata HOM05D006501 ORTHO05D008241 6.3e-47 191.4 114 81.6
FAN18G2585 Fragaria x ananassa HOM05D006501 ORTHO05D008241 1.1e-46 190.7 131 75.6
Gohir.A08G100000 Gossypium hirsutum HOM05D006501 ORTHO05D008241 1.1e-46 190.7 132 74.2
Lsat_1_v5_gn_6_12120 Lactuca sativa HOM05D006501 ORTHO05D008241 1.1e-46 190.7 108 83.3
Aqoxy7G00141 Aquilegia oxysepala HOM05D006501 ORTHO05D008241 1.4e-46 190.3 144 69.4
Medtr8g099345 Medicago truncatula HOM05D006501 ORTHO05D008241 1.4e-46 190.3 178 61.8
Prupe.5G116900 Prunus persica HOM05D006501 ORTHO05D008241 1.8e-46 189.9 137 74.5
Phvul.002G297000 Phaseolus vulgaris HOM05D006501 ORTHO05D008241 2.4e-46 189.5 142 70.4
RcHm_v2.0_Chr7g0195201 Rosa chinensis HOM05D006501 ORTHO05D008241 2.4e-46 189.5 144 70.8
Sp2g00400 Schrenkiella parvula HOM05D006501 ORTHO05D008241 2.4e-46 189.5 145 69.0
Atru.chr4.2141 Acer truncatum HOM05D006501 ORTHO05D008241 4.1e-46 188.7 140 70.0
Gorai.004G134700 Gossypium raimondii HOM05D006501 ORTHO05D008241 4.1e-46 188.7 132 73.5
TWI60G0228 Tripterygium wilfordii HOM05D006501 ORTHO05D008241 4.1e-46 188.7 149 67.8
Cc08_g15900 Coffea canephora HOM05D006501 ORTHO05D008241 5.3e-46 188.3 146 64.4
Glyma.05G215800 Glycine max HOM05D006501 ORTHO05D008241 5.3e-46 188.3 128 77.3
TAR374G0759 Trochodendron aralioides HOM05D006501 ORTHO05D008241 7.0e-46 188.0 122 79.5
Sabra03G0099700 Salix brachista HOM05D006501 ORTHO05D003403 9.1e-46 187.6 138 70.3
VMungo0251G3563 Vigna mungo HOM05D006501 ORTHO05D008241 9.1e-46 187.6 140 69.3
Gohir.D08G131800 Gossypium hirsutum HOM05D006501 ORTHO05D008241 1.2e-45 187.2 132 72.7
Cfa022928 Carpinus fangiana HOM05D006501 ORTHO05D008241 1.5e-45 186.8 114 83.3
Nn3g19061 Nelumbo nucifera HOM05D006501 ORTHO05D008241 1.5e-45 186.8 135 73.3
Peaxi162Scf00102g01748 Petunia axillaris HOM05D006501 ORTHO05D008241 1.5e-45 186.8 135 72.6
Potri.003G138500 Populus trichocarpa HOM05D006501 ORTHO05D008241 1.5e-45 186.8 138 68.8
Sed0001613 Sechium edule HOM05D006501 ORTHO05D008241 1.5e-45 186.8 132 72.7
MD14G1122900 Malus domestica HOM05D006501 ORTHO05D008241 2.0e-45 186.4 134 72.4
TAR374G1465 Trochodendron aralioides HOM05D006501 ORTHO05D008241 2.0e-45 186.4 122 78.7
AL2G10510 Arabidopsis lyrata HOM05D006501 ORTHO05D008241 2.6e-45 186.0 118 79.7
BolC9t54619H Brassica oleracea HOM05D006501 ORTHO05D008241 2.6e-45 186.0 127 74.0
COL.COLO4_10671 Corchorus olitorius HOM05D006501 ORTHO05D008241 3.4e-45 185.7 138 70.3
THA.LOC104809338 Tarenaya hassleriana HOM05D006501 ORTHO05D008241 5.9e-45 184.9 166 61.4
AT1G64355 Arabidopsis thaliana HOM05D006501 ORTHO05D008241 7.7e-45 184.5 142 70.4
MD06G1104000 Malus domestica HOM05D006501 ORTHO05D008241 7.7e-45 184.5 147 68.7
arahy.Tifrunner.gnm1.ann1.68SH35 Arachis hypogaea HOM05D006501 ORTHO05D008241 1.3e-44 183.7 114 80.7
arahy.Tifrunner.gnm1.ann1.MC0I99 Arachis hypogaea HOM05D006501 ORTHO05D008241 1.3e-44 183.7 114 80.7
Hund11400 Selenicereus undatus HOM05D006501 ORTHO05D008241 1.3e-44 183.7 135 73.3
Hma1.2p1_0952F.1_g241030 Hydrangea macrophylla HOM05D006501 ORTHO05D008241 1.7e-44 183.3 149 67.1
Ciclev10022489m.g Citrus clementina HOM05D006501 ORTHO05D008241 2.2e-44 183.0 142 67.6
PGR042G3674 Punica granatum HOM05D006501 ORTHO05D008241 2.2e-44 183.0 128 75.0
TPR.G3451 Trifolium pratense HOM05D006501 ORTHO05D008241 2.9e-44 182.6 130 73.1
Lalb_Chr05g0224191 Lupinus albus HOM05D006501 ORTHO05D008241 5.0e-44 181.8 130 73.1
Eucgr.E00849 Eucalyptus grandis HOM05D006501 ORTHO05D008241 1.9e-43 179.9 146 67.8
Ca_17489_v3 Cicer arietinum L. HOM05D006501 ORTHO05D008241 2.5e-43 179.5 138 70.3
Lj4g0012209 Lotus japonicus HOM05D006501 ORTHO05D008241 5.5e-43 178.3 132 72.0
Duzib068G1433 Durio zibethinus HOM05D006501 ORTHO05D008241 7.2e-43 177.9 153 62.7
Psat7g027120 Pisum sativum HOM05D006501 ORTHO05D008241 9.4e-43 177.6 159 61.0
PSO384G3305 Papaver somniferum HOM05D006501 ORTHO05D008241 1.2e-42 177.2 140 66.4
PSO135G1023 Papaver somniferum HOM05D006501 ORTHO05D008241 2.1e-42 176.4 126 73.0
Sc01g0010190 Simmondsia chinensis HOM05D006501 ORTHO05D008241 3.6e-42 175.6 142 64.8
HanXRQChr09g0256331 Helianthus annuus HOM05D006501 ORTHO05D008241 8.0e-42 174.5 118 73.7
Zm00001eb296420 Zea mays HOM05D006501 ORTHO05D008241 5.2e-41 171.8 144 66.7
COL.COLO4_10669 Corchorus olitorius HOM05D006501 ORTHO05D008241 6.7e-41 171.4 126 71.4
AagrBONN_evm.TU.Sc2ySwM_362.747 Anthoceros agrestis HOM05D006501 ORTHO05D008241 2.6e-40 169.5 145 62.8
Sed0024637 Sechium edule HOM05D006501 ORTHO05D008241 2.6e-40 169.5 145 62.1
SEGI_07201 Sequoiadendron giganteum HOM05D006501 ORTHO05D008241 2.6e-40 169.5 120 74.2
SalBow8G4809 Salvia bowleyana HOM05D006501 ORTHO05D008241 3.3e-40 169.1 211 47.4
HPP92_004586 Vanilla planifolia HOM05D006501 ORTHO05D000003 3.3e-40 169.1 143 63.6
CDE10G1320 Ceratophyllum demersum HOM05D000199 ORTHO05D001448 4.4e-40 168.7 129 66.7
Atru.chr9.2018 Acer truncatum HOM05D006501 ORTHO05D008241 5.7e-40 168.3 135 68.9
Pp3c8_24130 Physcomitrium patens HOM05D006501 ORTHO05D008241 2.8e-39 166.0 113 75.2
Migut.E01245 Erythranthe guttata HOM05D006501 ORTHO05D008241 3.8e-36 155.6 189 51.3
Mapoly0049s0020 Marchantia polymorpha HOM05D006501 ORTHO05D008241 5.0e-36 155.2 105 76.2
BcaC04g22630 Brassica carinata HOM05D006501 ORTHO05D008241 3.2e-35 152.5 83 89.2
Hma1.2p1_0952F.1_g241020 Hydrangea macrophylla HOM05D006501 ORTHO05D008241 5.2e-33 145.2 177 51.4
Cre08.g376450 Chlamydomonas reinhardtii HOM05D006501 ORTHO05D008241 7.0e-30 134.8 100 65.0
Potri.001G093001 Populus trichocarpa HOM05D006501 ORTHO05D008241 7.0e-30 134.8 74 87.8
QL02p031049 Quercus lobata HOM05D006501 ORTHO05D008241 5.5e-27 125.2 72 86.1
Zm00001eb150250 Zea mays HOM05D006501 ORTHO05D008241 7.2e-27 124.8 116 62.9
Ah.12g052370 Amaranthus hybridus HOM05D006501 ORTHO05D008241 2.1e-26 123.2 73 83.6
AUR62010820 Chenopodium quinoa HOM05D006501 ORTHO05D008241 1.0e-25 120.9 88 72.7
AUR62019819 Chenopodium quinoa HOM05D006501 ORTHO05D008241 1.0e-25 120.9 70 87.1
EL10Ac5g12897 Beta vulgaris HOM05D006501 ORTHO05D008241 5.2e-25 118.6 73 80.8
FvH4_5g04360 Fragaria vesca HOM05D006501 ORTHO05D008241 6.8e-25 118.2 70 81.4
Carub.0002s0043 Capsella rubella HOM05D006501 ORTHO05D008241 1.5e-24 117.1 87 67.8
Thhalv10023703m.g Eutrema salsugineum HOM05D006501 ORTHO05D008241 2.0e-24 116.7 89 68.5
CARHR046590 Cardamine hirsuta HOM05D006501 ORTHO05D008241 3.4e-24 115.9 81 70.4
SGA_v2.0_scaffold144G35857 Striga asiatica HOM05D006501 ORTHO05D008241 7.5e-24 114.8 127 52.8
SEGI_03665 Sequoiadendron giganteum HOM05D006501 ORTHO05D008241 2.7e-21 106.3 83 67.5
CBR_g30621 Chara braunii HOM05D006501 ORTHO05D008241 8.0e-18 94.7 61 77.0
Atru.chr9.2021 Acer truncatum HOM05D006501 ORTHO05D008241 8.9e-17 91.3 73 71.2
Lj2C170T10 Lonicera japonica HOM05D006501 ORTHO05D008241 1.5e-16 90.5 64 68.8
MCO03G553 Micromonas commoda HOM05D005851 ORTHO05D007137 4.9e-15 85.5 97 53.6
PRCOL_00002729 Prasinoderma coloniale HOM05D005851 ORTHO05D007137 1.8e-14 83.6 146 42.5
Ah.12g052380 Amaranthus hybridus HOM05D006501 ORTHO05D008241 5.4e-14 82.0 65 63.1
ECA233G1307 Erigeron canadensis HOM05D006501 ORTHO05D008241 2.0e-13 80.1 46 80.4
PRCOL_00005435 Prasinoderma coloniale HOM05D005851 ORTHO05D007137 2.1e-10 70.1 108 38.9
RcHm_v2.0_Chr6g0301591 Rosa chinensis HOM05D001075 ORTHO05D008241 6.1e-10 68.6 77 57.1
MCO14G091 Micromonas commoda HOM05D005851 ORTHO05D007137 1.4e-09 67.4 100 41.0
Hund07493 Selenicereus undatus HOM05D000089 ORTHO05D000104 9.2e-06 54.7 40 70.0


User provided reference genes

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