Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow1G7320 Salvia bowleyana HOM05D026611 ORTHO05D030567 5.4e-81 304.3 156 100.0
SalBow1G5994 Salvia bowleyana HOM05D026611 ORTHO05D030567 8.7e-39 164.1 121 78.5
SalBow1G1602 Salvia bowleyana HOM05D026611 ORTHO05D030567 4.3e-38 161.8 123 75.6
Peaxi162Scf00239g00129 Petunia axillaris HOM05D000127 ORTHO05D007184 1.4e-15 87.0 216 31.5
SGA_v2.0_scaffold20G09296 Striga asiatica HOM05D000127 ORTHO05D007184 6.7e-15 84.7 65 66.2
Migut.D00848 Erythranthe guttata HOM05D000127 ORTHO05D007184 1.1e-14 84.0 89 50.6
ECA236G2295 Erigeron canadensis HOM05D000127 ORTHO05D007184 1.5e-14 83.6 62 66.1
Lj2C1093T1 Lonicera japonica HOM05D000127 ORTHO05D007184 2.6e-14 82.8 63 61.9
Lsat_1_v5_gn_8_111440 Lactuca sativa HOM05D000127 ORTHO05D007184 3.3e-14 82.4 61 68.9
Migut.N00761 Erythranthe guttata HOM05D000127 ORTHO05D007184 7.4e-14 81.3 63 69.8
Oeu050014.1 Olea europaea HOM05D000127 ORTHO05D007184 7.4e-14 81.3 56 67.9
HanXRQChr10g0308081 Helianthus annuus HOM05D000127 ORTHO05D007184 4.8e-13 78.6 61 60.7
PGR119G1981 Punica granatum HOM05D000127 ORTHO05D007184 1.1e-12 77.4 61 63.9
Cfa011775 Carpinus fangiana HOM05D000127 ORTHO05D007184 1.8e-12 76.6 92 47.8
DCAR_012272 Daucus carota HOM05D000127 ORTHO05D007184 1.8e-12 76.6 61 62.3
RcHm_v2.0_Chr5g0071611 Rosa chinensis HOM05D000127 ORTHO05D007184 2.4e-12 76.3 61 63.9
ClCG03G000400 Citrullus lanatus HOM05D000127 ORTHO05D007184 3.1e-12 75.9 62 62.9
Ciclev10030073m.g Citrus clementina HOM05D000127 ORTHO05D007184 3.1e-12 75.9 61 67.2
PGSC0003DMG400004171 Solanum tuberosum HOM05D000127 ORTHO05D007184 4.1e-12 75.5 85 48.2
GSVIVG01024636001 Vitis vinifera HOM05D000127 ORTHO05D007184 5.3e-12 75.1 64 56.2
Dinv09667 Davidia involucrata HOM05D000127 ORTHO05D007184 7.0e-12 74.7 63 52.4
Nitab4.5_0000002g0010 Nicotiana tabacum HOM05D000127 ORTHO05D007184 7.0e-12 74.7 223 28.7
Haze_24409 Corylus avellana HOM05D000127 ORTHO05D007184 9.1e-12 74.3 92 45.7
CAN.G5.26 Capsicum annuum HOM05D000127 ORTHO05D007184 1.2e-11 73.9 85 48.2
FvH4_3g39730 Fragaria vesca HOM05D000127 ORTHO05D007184 1.6e-11 73.6 61 65.6
FAN11G2296 Fragaria x ananassa HOM05D000127 ORTHO05D007184 1.6e-11 73.6 86 51.2
FAN16G1474 Fragaria x ananassa HOM05D000127 ORTHO05D007184 1.6e-11 73.6 86 51.2
CsaV3_1G036520 Cucumis sativus L. HOM05D000127 ORTHO05D007184 2.0e-11 73.2 62 59.7
MELO3C020516.2 Cucumis melo HOM05D000127 ORTHO05D007184 3.5e-11 72.4 62 59.7
MD11G1057400 Malus domestica HOM05D000127 ORTHO05D007184 4.5e-11 72.0 60 63.3
Oeu027585.1 Olea europaea HOM05D000127 ORTHO05D007184 4.5e-11 72.0 220 30.5
Sed0016630 Sechium edule HOM05D000127 ORTHO05D007184 4.5e-11 72.0 62 59.7
Nitab4.5_0000684g0010 Nicotiana tabacum HOM05D000127 ORTHO05D007184 5.9e-11 71.6 77 51.9
Phvul.006G073800 Phaseolus vulgaris HOM05D000127 ORTHO05D007184 5.9e-11 71.6 77 49.4
Cfa011774 Carpinus fangiana HOM05D000127 ORTHO05D007184 7.7e-11 71.2 92 47.8
Dinv28696 Davidia involucrata HOM05D000127 ORTHO05D007184 7.7e-11 71.2 225 26.2
FAN21G3721 Fragaria x ananassa HOM05D000127 ORTHO05D007184 7.7e-11 71.2 81 51.9
FAN21G3868 Fragaria x ananassa HOM05D000127 ORTHO05D007184 7.7e-11 71.2 81 51.9
FAN25G0907 Fragaria x ananassa HOM05D000127 ORTHO05D007184 7.7e-11 71.2 61 63.9
Prupe.6G048600 Prunus persica HOM05D000127 ORTHO05D007184 1.0e-10 70.9 60 65.0
MD03G1056200 Malus domestica HOM05D000127 ORTHO05D007184 1.3e-10 70.5 60 60.0
CANSAT54G1569 Cannabis sativa HOM05D000127 ORTHO05D007184 1.7e-10 70.1 92 43.5
MD11G1057100 Malus domestica HOM05D000127 ORTHO05D007184 1.7e-10 70.1 60 61.7
TAR636G0078 Trochodendron aralioides HOM05D000127 ORTHO05D007184 2.2e-10 69.7 54 63.0
Actinidia32612 Actinidia chinensis HOM05D000127 ORTHO05D007184 3.8e-10 68.9 63 50.8
Manes.18G128100 Manihot esculenta HOM05D000127 ORTHO05D007184 3.8e-10 68.9 55 56.4
Thecc.09G357500 Theobroma cacao HOM05D000127 ORTHO05D007184 5.0e-10 68.6 60 58.3
TWI75G1528 Tripterygium wilfordii HOM05D000127 ORTHO05D007184 5.0e-10 68.6 92 43.5
Atru.chr3.4124 Acer truncatum HOM05D000127 ORTHO05D007184 6.5e-10 68.2 94 45.7
DCAR_007346 Daucus carota HOM05D000127 ORTHO05D007184 6.5e-10 68.2 63 52.4
Gohir.D08G007900 Gossypium hirsutum HOM05D000127 ORTHO05D007184 1.1e-09 67.4 92 43.5
Gorai.004G001100 Gossypium raimondii HOM05D000127 ORTHO05D007184 1.1e-09 67.4 92 43.5
Gohir.A08G000052 Gossypium hirsutum HOM05D000127 ORTHO05D007184 1.5e-09 67.0 92 44.6
COL.COLO4_11151 Corchorus olitorius HOM05D000127 ORTHO05D007184 1.9e-09 66.6 92 45.7
Manes.02G217000 Manihot esculenta HOM05D000127 ORTHO05D007184 2.5e-09 66.2 55 54.5
Cc01_g14830 Coffea canephora HOM05D000127 ORTHO05D007184 3.2e-09 65.9 63 57.1
Cpa.g.sc2.359 Carica papaya HOM05D000127 ORTHO05D007184 4.2e-09 65.5 58 51.7
Sc12g0001990 Simmondsia chinensis HOM05D000127 ORTHO05D007184 4.2e-09 65.5 62 53.2
TWI79G1604 Tripterygium wilfordii HOM05D000127 ORTHO05D007184 4.2e-09 65.5 92 43.5
CSS0028729 Camellia sinensis var. sinensis HOM05D000127 ORTHO05D007184 5.5e-09 65.1 62 51.6
TPR.G25687 Trifolium pratense HOM05D000127 ORTHO05D007184 7.2e-09 64.7 76 50.0
AL7G45810 Arabidopsis lyrata HOM05D000127 ORTHO05D007184 9.4e-09 64.3 62 46.8
CiPaw.13G069300 Carya illinoinensis HOM05D000127 ORTHO05D007184 9.4e-09 64.3 61 54.1
Aa31LG11G240 Aethionema arabicum HOM05D000127 ORTHO05D007184 1.2e-08 63.9 65 43.1
Duzib168G2196 Durio zibethinus HOM05D000127 ORTHO05D007184 1.2e-08 63.9 92 42.4
SHI19212 Sapria himalayana HOM05D000127 ORTHO05D007184 1.2e-08 63.9 61 55.7
Glyma.11G164200 Glycine max HOM05D000127 ORTHO05D007184 1.6e-08 63.5 92 44.6
BcaC03g14091 Brassica carinata HOM05D000127 ORTHO05D007184 2.7e-08 62.8 62 45.2
BcaC03g14093 Brassica carinata HOM05D000127 ORTHO05D007184 2.7e-08 62.8 62 45.2
C02p13340 Brassica napus HOM05D000127 ORTHO05D007184 2.7e-08 62.8 62 45.2
BolC2t07446H Brassica oleracea HOM05D000127 ORTHO05D007184 2.7e-08 62.8 62 45.2
Sp6g20150 Schrenkiella parvula HOM05D000127 ORTHO05D007184 2.7e-08 62.8 62 45.2
Carub.0007s3233 Capsella rubella HOM05D000127 ORTHO05D007184 3.6e-08 62.4 62 43.5
AT5G37060 Arabidopsis thaliana HOM05D000127 ORTHO05D007184 4.7e-08 62.0 62 41.9
A02p07690 Brassica napus HOM05D000127 ORTHO05D007184 4.7e-08 62.0 62 45.2
BraA02t05844Z Brassica rapa HOM05D000127 ORTHO05D007184 4.7e-08 62.0 62 45.2
Lalb_Chr15g0083261 Lupinus albus HOM05D000127 ORTHO05D007184 4.7e-08 62.0 74 43.2
Lalb_Chr18g0051391 Lupinus albus HOM05D000127 ORTHO05D007184 4.7e-08 62.0 60 51.7
QL01p026300 Quercus lobata HOM05D000127 ORTHO05D007184 4.7e-08 62.0 62 48.4
vmacro02921 Vaccinium macrocarpon HOM05D000127 ORTHO05D007184 4.7e-08 62.0 62 45.2
AUR62001874 Chenopodium quinoa HOM05D000127 ORTHO05D007184 6.1e-08 61.6 61 52.5
Phvul.006G073600 Phaseolus vulgaris HOM05D000127 ORTHO05D007184 6.1e-08 61.6 62 45.2
SalBow1G7936 Salvia bowleyana HOM05D026611 ORTHO05D030567 6.1e-08 61.6 34 91.2
BcaB05g22431 Brassica carinata HOM05D000127 ORTHO05D007184 8.0e-08 61.2 62 43.5
CARHR272290 Cardamine hirsuta HOM05D000127 ORTHO05D007184 8.0e-08 61.2 62 43.5
Thhalv10012665m.g Eutrema salsugineum HOM05D000127 ORTHO05D007184 8.0e-08 61.2 62 41.9
Gohir.D05G109100 Gossypium hirsutum HOM05D000127 ORTHO05D007184 8.0e-08 61.2 60 55.0
Gorai.009G113400 Gossypium raimondii HOM05D000127 ORTHO05D007184 8.0e-08 61.2 60 55.0
Ah.15g096080 Amaranthus hybridus HOM05D000127 ORTHO05D007184 1.0e-07 60.8 61 45.9
AL8G34650 Arabidopsis lyrata HOM05D000127 ORTHO05D007184 1.0e-07 60.8 86 37.2
BcaC04g19865 Brassica carinata HOM05D000127 ORTHO05D007184 1.0e-07 60.8 63 42.9
A10p15810 Brassica napus HOM05D000127 ORTHO05D007184 1.0e-07 60.8 63 42.9
C09p50340 Brassica napus HOM05D000127 ORTHO05D007184 1.0e-07 60.8 63 42.9
BolC9t57890H Brassica oleracea HOM05D000127 ORTHO05D007184 1.0e-07 60.8 63 42.9
BraA10t43644Z Brassica rapa HOM05D000127 ORTHO05D007184 1.0e-07 60.8 63 42.9
Carub.0008s1905 Capsella rubella HOM05D000127 ORTHO05D007184 1.0e-07 60.8 56 42.9
Rhsim13G0064400 Rhododendron simsii HOM05D000127 ORTHO05D007184 1.4e-07 60.5 92 33.7
AUR62009672 Chenopodium quinoa HOM05D000127 ORTHO05D007184 1.8e-07 60.1 60 51.7
Gohir.A05G109000 Gossypium hirsutum HOM05D000127 ORTHO05D007184 1.8e-07 60.1 60 53.3
Medtr3g465680 Medicago truncatula HOM05D000127 ORTHO05D007184 1.8e-07 60.1 73 43.8
Hund18954 Selenicereus undatus HOM05D000127 ORTHO05D006765 1.8e-07 60.1 62 48.4
BcaB08g36181 Brassica carinata HOM05D000127 ORTHO05D007184 2.3e-07 59.7 63 39.7
AT5G58460 Arabidopsis thaliana HOM05D000127 ORTHO05D007184 3.0e-07 59.3 86 37.2
AUR62001875 Chenopodium quinoa HOM05D000127 ORTHO05D007184 3.0e-07 59.3 62 48.4
Potri.001G282800 Populus trichocarpa HOM05D000127 ORTHO05D007184 3.0e-07 59.3 55 52.7
THA.LOC104814918 Tarenaya hassleriana HOM05D000127 ORTHO05D007184 3.0e-07 59.3 60 43.3
AUR62009673 Chenopodium quinoa HOM05D000127 ORTHO05D007184 6.7e-07 58.2 47 57.4
Eucgr.B04001 Eucalyptus grandis HOM05D000127 ORTHO05D007184 6.7e-07 58.2 63 49.2
THA.LOC104810691 Tarenaya hassleriana HOM05D000127 ORTHO05D007184 6.7e-07 58.2 60 43.3
BcaB01g04555 Brassica carinata HOM05D000127 ORTHO05D007184 8.8e-07 57.8 56 46.4
BolC3t13876H Brassica oleracea HOM05D000127 ORTHO05D007184 8.8e-07 57.8 56 46.4
Ca_15007_v3 Cicer arietinum L. HOM05D000127 ORTHO05D007184 8.8e-07 57.8 93 35.5
Lj6g0018678 Lotus japonicus HOM05D000127 ORTHO05D007184 8.8e-07 57.8 76 39.5
Potri.009G078000 Populus trichocarpa HOM05D000127 ORTHO05D007184 1.2e-06 57.4 61 44.3
arahy.Tifrunner.gnm1.ann1.PB1HA9 Arachis hypogaea HOM05D000127 ORTHO05D007184 1.5e-06 57.0 60 45.0
EL10Ac7g15916 Beta vulgaris HOM05D000127 ORTHO05D007184 1.5e-06 57.0 60 45.0
Psat5g154560 Pisum sativum HOM05D000127 ORTHO05D007184 3.3e-06 55.8 60 48.3
BraA03t10532Z Brassica rapa HOM05D000127 ORTHO05D007184 7.5e-06 54.7 56 42.9
A03p12210 Brassica napus HOM05D000127 ORTHO05D007184 9.7e-06 54.3 56 42.9
C03p14320 Brassica napus HOM05D000127 ORTHO05D007184 9.7e-06 54.3 56 42.9


User provided reference genes

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