Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow1G6809 Salvia bowleyana HOM05D003503 ORTHO05D003885 9.6e-151 537.0 301 100.0
SalBow1G6855 Salvia bowleyana HOM05D003503 ORTHO05D003885 2.8e-102 375.9 301 73.4
Migut.K00058 Erythranthe guttata HOM05D003503 ORTHO05D003885 1.1e-66 257.7 279 54.8
MSTRG.10833 Avicennia marina HOM05D003503 ORTHO05D003885 1.4e-61 240.7 301 56.1
MSTRG.26098 Avicennia marina HOM05D003503 ORTHO05D003885 1.4e-56 224.2 278 51.1
SGA_v2.0_scaffold69G23080 Striga asiatica HOM05D003503 ORTHO05D003885 1.1e-53 214.5 285 49.1
SalBow6G1355 Salvia bowleyana HOM05D003503 ORTHO05D003885 5.1e-51 205.7 286 48.3
Oeu033755.1 Olea europaea HOM05D003503 ORTHO05D003885 1.2e-47 194.5 272 48.5
CSS0007658 Camellia sinensis var. sinensis HOM05D003503 ORTHO05D003885 2.7e-44 183.3 282 47.5
Actinidia17255 Actinidia chinensis HOM05D003503 ORTHO05D003885 7.3e-42 175.3 282 46.5
Cc06_g16370 Coffea canephora HOM05D003503 ORTHO05D003885 1.2e-41 174.5 286 46.2
Actinidia38570 Actinidia chinensis HOM05D003503 ORTHO05D003885 3.1e-40 169.9 279 44.4
Hma1.2p1_0174F.1_g077040 Hydrangea macrophylla HOM05D003503 ORTHO05D003885 5.2e-40 169.1 273 44.3
Hma1.2p1_0640F.1_g194090 Hydrangea macrophylla HOM05D003503 ORTHO05D003885 2.0e-39 167.2 277 46.9
Nitab4.5_0010571g0010 Nicotiana tabacum HOM05D003503 ORTHO05D003885 1.7e-38 164.1 273 44.0
Nitab4.5_0000016g0070 Nicotiana tabacum HOM05D003503 ORTHO05D003885 1.1e-37 161.4 277 43.0
Dinv18112 Davidia involucrata HOM05D003503 ORTHO05D003885 2.4e-37 160.2 274 43.1
Dinv24108 Davidia involucrata HOM05D003503 ORTHO05D000616 2.4e-37 160.2 273 44.0
QL07p023685 Quercus lobata HOM05D003503 ORTHO05D003885 9.2e-37 158.3 273 43.6
Rhsim04G0098700 Rhododendron simsii HOM05D003503 ORTHO05D003885 1.2e-36 157.9 310 39.4
Manes.03G008800 Manihot esculenta HOM05D003503 ORTHO05D003885 1.3e-35 154.5 278 40.6
Nitab4.5_0006853g0010 Nicotiana tabacum HOM05D003503 ORTHO05D003885 6.6e-35 152.1 274 44.2
Solyc10g080400.2 Solanum lycopersicum HOM05D003503 ORTHO05D003885 6.6e-35 152.1 273 43.2
DCAR_024104 Daucus carota HOM05D003503 ORTHO05D003885 1.9e-34 150.6 279 40.5
Lju124A33T34 Lonicera japonica HOM05D003503 ORTHO05D003885 1.9e-34 150.6 269 42.4
QL07p023657 Quercus lobata HOM05D003503 ORTHO05D003885 3.3e-34 149.8 292 41.1
PGSC0003DMG402023713 Solanum tuberosum HOM05D003503 ORTHO05D003885 5.6e-34 149.1 273 42.1
CSS0023140 Camellia sinensis var. sinensis HOM05D003503 ORTHO05D003885 9.6e-34 148.3 255 43.5
Sopen10g030940 Solanum pennellii HOM05D003503 ORTHO05D003885 1.2e-33 147.9 272 42.3
Potri.006G057800 Populus trichocarpa HOM05D003503 ORTHO05D003885 1.6e-33 147.5 285 42.8
Sabra06G0041000 Salix brachista HOM05D003503 ORTHO05D003885 1.6e-33 147.5 285 41.8
GSVIVG01033358001 Vitis vinifera HOM05D003503 ORTHO05D003885 1.6e-33 147.5 272 41.5
Atru.chr1.937 Acer truncatum HOM05D003503 ORTHO05D003885 3.6e-33 146.4 272 41.9
vmacro09100 Vaccinium macrocarpon HOM05D003503 ORTHO05D003885 3.6e-33 146.4 328 39.9
Ciclev10005700m.g Citrus clementina HOM05D003503 ORTHO05D003885 4.7e-33 146.0 274 42.0
Nitab4.5_0004063g0080 Nicotiana tabacum HOM05D003503 ORTHO05D003885 6.2e-33 145.6 274 43.1
Eucgr.A02419 Eucalyptus grandis HOM05D003503 ORTHO05D003885 3.1e-32 143.3 278 41.0
Cfa020096 Carpinus fangiana HOM05D003503 ORTHO05D003885 4.0e-32 142.9 283 41.7
Cfa016885 Carpinus fangiana HOM05D003503 ORTHO05D003885 9.0e-32 141.7 276 41.3
CiPaw.10G029000 Carya illinoinensis HOM05D003503 ORTHO05D003885 1.2e-31 141.4 281 42.0
DCAR_024103 Daucus carota HOM05D003503 ORTHO05D003885 2.0e-31 140.6 221 43.0
TAR369G0624 Trochodendron aralioides HOM05D003503 ORTHO05D001307 2.0e-31 140.6 275 42.2
Haze_19934 Corylus avellana HOM05D003503 ORTHO05D003885 2.6e-31 140.2 273 41.8
Manes.16G129700 Manihot esculenta HOM05D003503 ORTHO05D003885 2.6e-31 140.2 275 37.5
TWI74G1092 Tripterygium wilfordii HOM05D003503 ORTHO05D003885 2.6e-31 140.2 276 39.5
CSS0013310 Camellia sinensis var. sinensis HOM05D003503 ORTHO05D003885 3.4e-31 139.8 255 42.7
CAN.G128.30 Capsicum annuum HOM05D003503 ORTHO05D003885 4.4e-31 139.4 287 40.8
Peaxi162Scf00258g00220 Petunia axillaris HOM05D003503 ORTHO05D003885 4.4e-31 139.4 273 42.1
Actinidia20299 Actinidia chinensis HOM05D003503 ORTHO05D003885 7.6e-31 138.7 139 56.8
Potri.016G050300 Populus trichocarpa HOM05D003503 ORTHO05D003885 1.7e-30 137.5 279 41.9
Haze_20095 Corylus avellana HOM05D003503 ORTHO05D003885 2.4e-29 133.7 302 39.4
Gohir.D11G331100 Gossypium hirsutum HOM05D003503 ORTHO05D003885 2.4e-29 133.7 277 40.1
Gorai.007G361800 Gossypium raimondii HOM05D003503 ORTHO05D003885 4.2e-29 132.9 277 40.1
Thecc.05G166300 Theobroma cacao HOM05D003503 ORTHO05D003885 5.4e-29 132.5 281 40.6
Gohir.A11G313900 Gossypium hirsutum HOM05D003503 ORTHO05D003885 7.1e-29 132.1 283 39.6
SGA_v2.0_scaffold105G30470 Striga asiatica HOM05D003503 ORTHO05D003885 7.1e-29 132.1 251 41.0
ECA248G0895 Erigeron canadensis HOM05D003503 ORTHO05D003885 1.2e-28 131.3 277 39.7
Prupe.7G071700 Prunus persica HOM05D003503 ORTHO05D003885 1.6e-28 131.0 272 40.4
HanXRQChr05g0132771 Helianthus annuus HOM05D003503 ORTHO05D003885 2.1e-28 130.6 240 41.2
Lsat_1_v5_gn_8_79401 Lactuca sativa HOM05D003503 ORTHO05D003885 2.7e-28 130.2 303 35.6
THA.LOC104802399 Tarenaya hassleriana HOM05D003503 ORTHO05D003885 3.5e-28 129.8 140 56.4
Cpa.g.sc85.98 Carica papaya HOM05D003503 ORTHO05D003885 6.0e-28 129.0 281 38.4
Duzib106G0586 Durio zibethinus HOM05D003503 ORTHO05D003885 6.0e-28 129.0 279 38.7
Peaxi162Scf00285g00427 Petunia axillaris HOM05D003503 ORTHO05D003885 6.0e-28 129.0 277 38.3
Cpa.g.sc85.97 Carica papaya HOM05D003503 ORTHO05D003885 7.8e-28 128.6 299 41.5
ECA248G2321 Erigeron canadensis HOM05D003503 ORTHO05D003885 1.3e-27 127.9 275 38.5
Peaxi162Scf00406g00711 Petunia axillaris HOM05D003503 ORTHO05D003885 1.3e-27 127.9 275 41.5
MD12G1062400 Malus domestica HOM05D003503 ORTHO05D003885 2.3e-27 127.1 271 36.9
Sabra16G0053800 Salix brachista HOM05D003503 ORTHO05D003885 2.3e-27 127.1 279 38.7
Sp4g24440 Schrenkiella parvula HOM05D003503 ORTHO05D003885 3.9e-27 126.3 139 56.1
Aa31LG1G24010 Aethionema arabicum HOM05D003503 ORTHO05D003885 1.1e-26 124.8 273 37.7
Thhalv10017150m.g Eutrema salsugineum HOM05D003503 ORTHO05D003885 1.1e-26 124.8 139 55.4
HanXRQChr06g0176361 Helianthus annuus HOM05D003503 ORTHO05D003885 1.1e-26 124.8 219 42.0
CANSAT80G0280 Cannabis sativa HOM05D003503 ORTHO05D003885 1.9e-26 124.0 281 37.7
CANSAT80G2578 Cannabis sativa HOM05D003503 ORTHO05D003885 1.9e-26 124.0 283 37.8
CiPaw.09G033400 Carya illinoinensis HOM05D003503 ORTHO05D003885 1.9e-26 124.0 268 40.3
AT2G42260 Arabidopsis thaliana HOM05D003503 ORTHO05D003885 3.3e-26 123.2 280 36.4
MELO3C023180.2 Cucumis melo HOM05D003503 ORTHO05D003885 4.3e-26 122.9 274 39.1
Lalb_Chr18g0047601 Lupinus albus HOM05D003503 ORTHO05D003885 5.6e-26 122.5 137 56.2
Sed0025913 Sechium edule HOM05D003503 ORTHO05D003885 5.6e-26 122.5 270 38.9
Carub.0004s2460 Capsella rubella HOM05D003503 ORTHO05D003885 7.3e-26 122.1 139 54.0
THA.LOC104824461 Tarenaya hassleriana HOM05D003503 ORTHO05D003885 7.3e-26 122.1 141 53.2
Duzib128G0723 Durio zibethinus HOM05D003503 ORTHO05D003885 1.6e-25 120.9 280 38.2
CARHR137300 Cardamine hirsuta HOM05D003503 ORTHO05D003885 2.1e-25 120.6 272 36.0
PGR004G1207 Punica granatum HOM05D003503 ORTHO05D003885 2.1e-25 120.6 273 33.7
CsaV3_4G010540 Cucumis sativus L. HOM05D003503 ORTHO05D003885 3.6e-25 119.8 272 38.2
BolC4t21976H Brassica oleracea HOM05D003503 ORTHO05D003885 6.2e-25 119.0 141 52.5
MD14G1063100 Malus domestica HOM05D003503 ORTHO05D003885 6.2e-25 119.0 270 35.2
BcaC02g12471 Brassica carinata HOM05D003503 ORTHO05D003885 8.1e-25 118.6 135 52.6
BcaNung05887 Brassica carinata HOM05D003503 ORTHO05D003885 8.1e-25 118.6 135 52.6
C04p03390 Brassica napus HOM05D003503 ORTHO05D003885 8.1e-25 118.6 135 52.6
A05p02800 Brassica napus HOM05D003503 ORTHO05D003885 1.1e-24 118.2 136 53.7
BraA05t19272Z Brassica rapa HOM05D003503 ORTHO05D003885 1.1e-24 118.2 136 53.7
HanXRQChr15g0483571 Helianthus annuus HOM05D003503 ORTHO05D003885 1.1e-24 118.2 234 39.3
Migut.J01803 Erythranthe guttata HOM05D003503 ORTHO05D003885 1.8e-24 117.5 272 36.8
FAN05G1437 Fragaria x ananassa HOM05D003503 ORTHO05D003885 1.8e-24 117.5 263 35.4
SHI33674 Sapria himalayana HOM05D003503 ORTHO05D003885 5.3e-24 115.9 280 37.9
Thecc.06G029500 Theobroma cacao HOM05D003503 ORTHO05D003885 5.3e-24 115.9 278 36.0
RcHm_v2.0_Chr3g0473161 Rosa chinensis HOM05D003503 ORTHO05D003885 6.9e-24 115.5 263 36.5
BcaNung04400 Brassica carinata HOM05D003503 ORTHO05D003885 9.0e-24 115.2 132 51.5
ClCG04G000340 Citrullus lanatus HOM05D003503 ORTHO05D003885 9.0e-24 115.2 274 37.2
FvH4_6g18600 Fragaria vesca HOM05D003503 ORTHO05D003885 1.2e-23 114.8 264 36.0
FAN14G4545 Fragaria x ananassa HOM05D003503 ORTHO05D003885 1.2e-23 114.8 264 36.0
FAN05G4212 Fragaria x ananassa HOM05D003503 ORTHO05D003885 1.5e-23 114.4 274 35.8
FAN09G1919 Fragaria x ananassa HOM05D003503 ORTHO05D003885 1.5e-23 114.4 264 36.0
CSS0045770 Camellia sinensis var. sinensis HOM05D003503 ORTHO05D003885 2.0e-23 114.0 270 37.4
FAN02G2343 Fragaria x ananassa HOM05D003503 ORTHO05D003885 2.0e-23 114.0 268 35.1
FAN26G0276 Fragaria x ananassa HOM05D003503 ORTHO05D003885 2.0e-23 114.0 272 35.7
FAN26G0411 Fragaria x ananassa HOM05D003503 ORTHO05D003885 2.0e-23 114.0 272 35.7
AT3G57860 Arabidopsis thaliana HOM05D003503 ORTHO05D003885 2.6e-23 113.6 142 49.3
FvH4_1g24920 Fragaria vesca HOM05D003503 ORTHO05D003885 2.6e-23 113.6 132 50.8
FAN19G1882 Fragaria x ananassa HOM05D003503 ORTHO05D003885 4.5e-23 112.8 272 35.7
Phvul.001G138700 Phaseolus vulgaris HOM05D003503 ORTHO05D003885 4.5e-23 112.8 142 50.7
BcaC07g40221 Brassica carinata HOM05D003503 ORTHO05D003885 7.6e-23 112.1 272 37.9
FAN23G1753 Fragaria x ananassa HOM05D003503 ORTHO05D003885 7.6e-23 112.1 269 36.1
FAN23G2494 Fragaria x ananassa HOM05D003503 ORTHO05D003885 7.6e-23 112.1 269 36.1
VMungo1383G2219 Vigna mungo HOM05D003503 ORTHO05D003885 9.9e-23 111.7 175 44.6
Nn2g15511 Nelumbo nucifera HOM05D003503 ORTHO05D003885 1.3e-22 111.3 138 48.6
COL.COLO4_28742 Corchorus olitorius HOM05D003503 ORTHO05D003885 1.7e-22 110.9 197 42.1
Glyma.03G141800 Glycine max HOM05D003503 ORTHO05D003885 3.8e-22 109.8 135 51.9
RcHm_v2.0_Chr3g0473181 Rosa chinensis HOM05D003503 ORTHO05D003885 3.8e-22 109.8 263 35.7
Ca_08494_v3 Cicer arietinum L. HOM05D003503 ORTHO05D003885 1.1e-21 108.2 148 52.0
Aa31LG10G12570 Aethionema arabicum HOM05D003503 ORTHO05D003885 1.4e-21 107.8 140 49.3
Carub.0005s2470 Capsella rubella HOM05D003503 ORTHO05D003885 1.4e-21 107.8 139 48.9
Lalb_Chr15g0078851 Lupinus albus HOM05D003503 ORTHO05D003885 1.4e-21 107.8 134 50.7
A09p50720 Brassica napus HOM05D003503 ORTHO05D003885 1.9e-21 107.5 145 49.0
unitig_749.g14030 Utricularia gibba HOM05D003503 ORTHO05D003885 2.4e-21 107.1 269 34.9
BcaC07g40160 Brassica carinata HOM05D003503 ORTHO05D003885 9.3e-21 105.1 144 46.5
Thhalv10006194m.g Eutrema salsugineum HOM05D003503 ORTHO05D003885 1.2e-20 104.8 276 34.4
C08p33430 Brassica napus HOM05D003503 ORTHO05D003885 1.6e-20 104.4 149 49.0
CARHR168170 Cardamine hirsuta HOM05D003503 ORTHO05D003885 2.1e-20 104.0 140 46.4
unitig_26.g8909 Utricularia gibba HOM05D003503 ORTHO05D003885 2.1e-20 104.0 165 43.0
BcaC07g40334 Brassica carinata HOM05D003503 ORTHO05D003885 2.7e-20 103.6 148 47.3
TWI53G0899 Tripterygium wilfordii HOM05D003503 ORTHO05D003885 2.7e-20 103.6 259 36.3
AL5G39520 Arabidopsis lyrata HOM05D003503 ORTHO05D003885 3.5e-20 103.2 139 46.8
TPR.G4785 Trifolium pratense HOM05D003503 ORTHO05D003885 4.6e-20 102.8 147 47.6
Medtr7g092570 Medicago truncatula HOM05D003503 ORTHO05D003885 7.9e-20 102.1 150 46.0
Lj1g0016608 Lotus japonicus HOM05D003503 ORTHO05D003885 1.8e-19 100.9 134 47.8
AUR62021551 Chenopodium quinoa HOM05D003503 ORTHO05D003885 2.3e-19 100.5 136 43.4
Glyma.19G144400 Glycine max HOM05D003503 ORTHO05D003885 5.1e-19 99.4 138 48.6
DCAR_020468 Daucus carota HOM05D003503 ORTHO05D003885 8.7e-19 98.6 141 44.0
PSO384G2274 Papaver somniferum HOM05D003503 ORTHO05D003885 3.3e-18 96.7 145 44.8
PSO541G0601 Papaver somniferum HOM05D003503 ORTHO05D003885 4.3e-18 96.3 280 33.9
Sed0010654 Sechium edule HOM05D003503 ORTHO05D003885 5.6e-18 95.9 272 35.3
PSO675G0055 Papaver somniferum HOM05D003503 ORTHO05D003885 7.4e-18 95.5 291 32.6
Aqoxy2G00107 Aquilegia oxysepala HOM05D003503 ORTHO05D003885 9.6e-18 95.1 132 45.5
AUR62008542 Chenopodium quinoa HOM05D003503 ORTHO05D003885 9.6e-18 95.1 136 41.2
Sp5g04860 Schrenkiella parvula HOM05D003503 ORTHO05D003885 1.3e-17 94.7 270 34.1
PSO339G6426 Papaver somniferum HOM05D003503 ORTHO05D003885 1.6e-17 94.4 138 44.2
Hund02580 Selenicereus undatus HOM05D003503 ORTHO05D003885 3.7e-17 93.2 140 42.9
Aqoxy2G00125 Aquilegia oxysepala HOM05D003503 ORTHO05D003885 6.2e-17 92.4 134 46.3
EL10Ac5g11139 Beta vulgaris HOM05D003503 ORTHO05D003885 1.4e-16 91.3 136 41.2
Psat3g070200 Pisum sativum HOM05D003503 ORTHO05D003885 1.4e-16 91.3 141 47.5
Aqoxy2G00088 Aquilegia oxysepala HOM05D003503 ORTHO05D003885 2.4e-16 90.5 134 45.5
arahy.Tifrunner.gnm1.ann1.P0WGR4 Arachis hypogaea HOM05D003503 ORTHO05D003885 2.4e-16 90.5 267 36.3
TAR629G2270 Trochodendron aralioides HOM05D003503 ORTHO05D003885 3.1e-16 90.1 136 44.1
AL4G40620 Arabidopsis lyrata HOM05D003503 ORTHO05D003885 4.0e-16 89.7 85 61.2
arahy.Tifrunner.gnm1.ann1.E4BIS3 Arachis hypogaea HOM05D003503 ORTHO05D003885 1.2e-15 88.2 267 36.7
Ah.13g073290 Amaranthus hybridus HOM05D003503 ORTHO05D003885 4.9e-14 82.8 135 38.5
Sc19g0006890 Simmondsia chinensis HOM05D003503 ORTHO05D003885 6.4e-14 82.4 138 41.3
Hund02582 Selenicereus undatus HOM05D003503 ORTHO05D003885 1.1e-13 81.6 134 38.8
EL10Ac3g06131 Beta vulgaris HOM05D003503 ORTHO05D003885 4.2e-13 79.7 135 40.7
TAR633G0309 Trochodendron aralioides HOM05D000064 ORTHO05D003885 4.2e-13 79.7 223 32.7
Ah.02g114090 Amaranthus hybridus HOM05D000622 ORTHO05D000475 9.3e-13 78.6 135 39.3
AUR62002437 Chenopodium quinoa HOM05D003503 ORTHO05D003885 1.6e-12 77.8 133 42.1
AUR62023750 Chenopodium quinoa HOM05D003503 ORTHO05D003885 1.6e-12 77.8 133 40.6
BcaB01g03443 Brassica carinata HOM05D002899 ORTHO05D003885 2.7e-12 77.0 65 66.2
BcaC01g05380 Brassica carinata HOM05D003503 ORTHO05D003885 1.8e-11 74.3 147 37.4
Hund02581 Selenicereus undatus HOM05D003503 ORTHO05D003885 1.1e-10 71.6 177 32.2
HanXRQChr06g0172301 Helianthus annuus HOM05D003503 ORTHO05D003885 4.8e-09 66.2 95 36.8
C07p14610 Brassica napus HOM05D003503 ORTHO05D003885 9.0e-08 62.0 140 34.3
CSS0008617 Camellia sinensis var. sinensis HOM05D003503 ORTHO05D003885 9.0e-08 62.0 92 44.6
MBI04_g14263_MAGBIO Magnolia biondii HOM05D000102 ORTHO05D000138 4.9e-06 56.2 150 34.0
Os04g0472700 Oryza sativa ssp. japonica HOM05D003503 ORTHO05D003885 4.9e-06 56.2 144 31.2
C04p28750 Brassica napus HOM05D003503 ORTHO05D003885 6.5e-06 55.8 85 40.0


User provided reference genes

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