Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow1G5756 Salvia bowleyana HOM05D030118 ORTHO05D008716 2.3e-84 315.5 154 100.0
SalBow1G8042 Salvia bowleyana HOM05D030118 ORTHO05D354579 2.2e-26 122.9 73 84.9
SalBow1G8057 Salvia bowleyana HOM05D030118 ORTHO05D363390 2.2e-26 122.9 73 84.9
SalBow3G1180 Salvia bowleyana HOM05D006915 ORTHO05D008716 6.4e-18 94.7 91 60.4
Oeu043329.1 Olea europaea HOM05D006915 ORTHO05D008716 1.7e-10 70.1 91 42.9
QL03p019427 Quercus lobata HOM05D006915 ORTHO05D008716 1.1e-09 67.4 90 41.1
SalBow1G0725 Salvia bowleyana HOM05D000026 ORTHO05D000127 1.1e-09 67.4 31 100.0
Sc16g0008720 Simmondsia chinensis HOM05D006915 ORTHO05D008716 1.9e-09 66.6 90 40.0
GSVIVG01031161001 Vitis vinifera HOM05D006915 ORTHO05D008716 4.2e-09 65.5 80 41.2
Haze_04112 Corylus avellana HOM05D006915 ORTHO05D008716 7.1e-09 64.7 90 41.1
Rhsim07G0193700 Rhododendron simsii HOM05D006915 ORTHO05D008716 7.1e-09 64.7 91 39.6
Gohir.A08G101064 Gossypium hirsutum HOM05D006915 ORTHO05D008716 9.3e-09 64.3 91 45.1
Gohir.A08G208000 Gossypium hirsutum HOM05D006915 ORTHO05D008716 9.3e-09 64.3 91 45.1
Gohir.A08G208040 Gossypium hirsutum HOM05D006915 ORTHO05D008716 9.3e-09 64.3 91 45.1
Hma1.2p1_0472F.1_g159690 Hydrangea macrophylla HOM05D006915 ORTHO05D008716 2.1e-08 63.2 91 38.5
Actinidia35543 Actinidia chinensis HOM05D006915 ORTHO05D008716 2.7e-08 62.8 90 37.8
arahy.Tifrunner.gnm1.ann1.7FV96H Arachis hypogaea HOM05D006915 ORTHO05D008716 2.7e-08 62.8 91 40.7
CSS0006217 Camellia sinensis var. sinensis HOM05D006915 ORTHO05D008716 2.7e-08 62.8 91 38.5
CSS0012162 Camellia sinensis var. sinensis HOM05D006915 ORTHO05D008716 2.7e-08 62.8 91 38.5
Gohir.A11G269900 Gossypium hirsutum HOM05D006915 ORTHO05D008716 2.7e-08 62.8 93 44.1
Lj5A352T44 Lonicera japonica HOM05D006915 ORTHO05D008716 3.5e-08 62.4 94 40.4
FAN09G1271 Fragaria x ananassa HOM05D006915 ORTHO05D008716 4.6e-08 62.0 79 44.3
Gohir.D08G224700 Gossypium hirsutum HOM05D006915 ORTHO05D008716 6.0e-08 61.6 91 42.9
Cpa.g.sc48.116 Carica papaya HOM05D006915 ORTHO05D008716 7.9e-08 61.2 90 38.9
arahy.Tifrunner.gnm1.ann1.5J2W84 Arachis hypogaea HOM05D006915 ORTHO05D008716 1.0e-07 60.8 91 39.6
ClCG03G017170 Citrullus lanatus HOM05D006915 ORTHO05D008716 1.0e-07 60.8 90 35.6
MELO3C015286.2 Cucumis melo HOM05D006915 ORTHO05D008716 1.0e-07 60.8 91 37.4
Dinv30841 Davidia involucrata HOM05D006915 ORTHO05D008716 1.0e-07 60.8 91 35.2
Migut.N02102 Erythranthe guttata HOM05D006915 ORTHO05D008716 1.0e-07 60.8 77 40.3
Gohir.D11G280100 Gossypium hirsutum HOM05D006915 ORTHO05D008716 1.0e-07 60.8 93 41.9
Gorai.004G238600 Gossypium raimondii HOM05D006915 ORTHO05D008716 1.0e-07 60.8 91 42.9
Gorai.007G302300 Gossypium raimondii HOM05D006915 ORTHO05D008716 1.0e-07 60.8 93 41.9
CsaV3_1G038600 Cucumis sativus L. HOM05D006915 ORTHO05D008716 1.8e-07 60.1 91 38.5
Medtr1g083540 Medicago truncatula HOM05D006915 ORTHO05D008716 1.8e-07 60.1 92 37.0
RcHm_v2.0_Chr3g0456361 Rosa chinensis HOM05D006915 ORTHO05D008716 3.0e-07 59.3 79 41.8
Sed0020087 Sechium edule HOM05D006915 ORTHO05D008716 3.0e-07 59.3 91 36.3
Duzib177G0174 Durio zibethinus HOM05D006915 ORTHO05D008716 3.9e-07 58.9 91 44.0
FvH4_6g06870 Fragaria vesca HOM05D006915 ORTHO05D008716 3.9e-07 58.9 79 43.0
FAN14G4333 Fragaria x ananassa HOM05D006915 ORTHO05D008716 3.9e-07 58.9 79 43.0
Prupe.6G318400 Prunus persica HOM05D006915 ORTHO05D008716 3.9e-07 58.9 90 38.9
Hund21722 Selenicereus undatus HOM05D006915 ORTHO05D008716 3.9e-07 58.9 90 36.7
Lj5g0027210 Lotus japonicus HOM05D006915 ORTHO05D008716 6.7e-07 58.2 90 35.6
Manes.08G115100 Manihot esculenta HOM05D006915 ORTHO05D008716 6.7e-07 58.2 91 36.3
PGSC0003DMG400024769 Solanum tuberosum HOM05D006915 ORTHO05D008716 6.7e-07 58.2 91 37.4
TAR362G1305 Trochodendron aralioides HOM05D006915 ORTHO05D008716 6.7e-07 58.2 91 40.7
Cc02_g34410 Coffea canephora HOM05D006915 ORTHO05D008716 8.7e-07 57.8 90 40.0
Atru.chr2.96 Acer truncatum HOM05D006915 ORTHO05D008716 1.1e-06 57.4 90 36.7
EL10Ac4g09887 Beta vulgaris HOM05D006915 ORTHO05D008716 1.1e-06 57.4 89 34.8
Nitab4.5_0006239g0010 Nicotiana tabacum HOM05D006915 ORTHO05D008716 1.1e-06 57.4 91 37.4
Nitab4.5_0006355g0020 Nicotiana tabacum HOM05D006915 ORTHO05D008716 1.1e-06 57.4 90 37.8
Sopen01g043500 Solanum pennellii HOM05D006915 ORTHO05D008716 1.1e-06 57.4 91 37.4
CAN.G1273.37 Capsicum annuum HOM05D006915 ORTHO05D008716 1.5e-06 57.0 91 36.3
Duzib106G0016 Durio zibethinus HOM05D006915 ORTHO05D008716 2.5e-06 56.2 91 41.8
MD04G1197900 Malus domestica HOM05D006915 ORTHO05D008716 2.5e-06 56.2 90 38.9
Psat6g151360 Pisum sativum HOM05D006915 ORTHO05D008716 2.5e-06 56.2 92 33.7
SalBow1G4591 Salvia bowleyana HOM05D030118 ORTHO05D353810 2.5e-06 56.2 36 83.3
CiPaw.07G024000 Carya illinoinensis HOM05D006915 ORTHO05D008716 3.3e-06 55.8 91 37.4
Ciclev10003191m.g Citrus clementina HOM05D006915 ORTHO05D008716 4.3e-06 55.5 90 40.0
DCAR_014259 Daucus carota HOM05D006915 ORTHO05D008716 4.3e-06 55.5 91 36.3
Ca_10149_v3 Cicer arietinum L. HOM05D006915 ORTHO05D008716 7.4e-06 54.7 92 33.7
Thecc.05G316200 Theobroma cacao HOM05D006915 ORTHO05D008716 7.4e-06 54.7 91 39.6
Phvul.007G198300 Phaseolus vulgaris HOM05D006915 ORTHO05D008716 9.6e-06 54.3 90 33.3
TPR.G17725 Trifolium pratense HOM05D006915 ORTHO05D008716 9.6e-06 54.3 92 33.7
TWI56G0967 Tripterygium wilfordii HOM05D006915 ORTHO05D008716 9.6e-06 54.3 90 38.9


User provided reference genes

Program Settings