Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow1G4707 Salvia bowleyana HOM05D002211 ORTHO05D002206 1.0e-51 206.5 105 100.0
MSTRG.9225 Avicennia marina HOM05D002211 ORTHO05D002206 1.1e-32 143.3 89 75.3
SalBow1G6037 Salvia bowleyana HOM05D002211 ORTHO05D002206 1.1e-29 133.3 73 94.5
Migut.F02065 Erythranthe guttata HOM05D002211 ORTHO05D002206 4.7e-28 127.9 95 65.3
MSTRG.8176 Avicennia marina HOM05D002211 ORTHO05D002206 5.7e-26 120.9 93 64.5
Oeu001241.1 Olea europaea HOM05D002211 ORTHO05D002206 4.4e-18 94.7 86 57.0
SGA_v2.0_scaffold13G06340 Striga asiatica HOM05D002211 ORTHO05D002206 1.3e-17 93.2 51 78.4
Manes.08G147100 Manihot esculenta HOM05D002211 ORTHO05D002206 8.5e-14 80.5 44 75.0
TWI32G0781 Tripterygium wilfordii HOM05D002211 ORTHO05D002206 4.2e-13 78.2 90 45.6
Sc06g0005240 Simmondsia chinensis HOM05D002211 ORTHO05D002206 5.5e-13 77.8 52 71.2
Prupe.6G355600 Prunus persica HOM05D002211 ORTHO05D002206 9.5e-13 77.0 51 70.6
Gohir.A11G241500 Gossypium hirsutum HOM05D002211 ORTHO05D002206 6.1e-12 74.3 39 82.1
Gohir.D11G250800 Gossypium hirsutum HOM05D002211 ORTHO05D002206 6.1e-12 74.3 39 82.1
Gorai.007G268900 Gossypium raimondii HOM05D002211 ORTHO05D002206 6.1e-12 74.3 39 82.1
Nitab4.5_0004201g0020 Nicotiana tabacum HOM05D002211 ORTHO05D002206 6.1e-12 74.3 37 81.1
QL01p047517 Quercus lobata HOM05D002211 ORTHO05D002206 6.1e-12 74.3 39 82.1
FvH4_6g01200 Fragaria vesca HOM05D001040 ORTHO05D002795 1.0e-11 73.6 37 83.8
FvH4_6g01210 Fragaria vesca HOM05D002211 ORTHO05D002206 1.0e-11 73.6 37 83.8
FAN05G1779 Fragaria x ananassa HOM05D002211 ORTHO05D002206 1.0e-11 73.6 37 83.8
FAN05G2499 Fragaria x ananassa HOM05D002211 ORTHO05D002206 1.0e-11 73.6 37 83.8
FAN09G3091 Fragaria x ananassa HOM05D002211 ORTHO05D002206 1.0e-11 73.6 37 83.8
MD12G1253400 Malus domestica HOM05D002211 ORTHO05D002206 1.0e-11 73.6 37 83.8
unitig_46.g18575 Utricularia gibba HOM05D002211 ORTHO05D002206 1.0e-11 73.6 39 82.1
Haze_04489 Corylus avellana HOM05D002211 ORTHO05D002206 1.4e-11 73.2 55 63.6
TWI60G0660 Tripterygium wilfordii HOM05D002211 ORTHO05D002206 1.4e-11 73.2 52 63.5
Nitab4.5_0000504g0030 Nicotiana tabacum HOM05D002211 ORTHO05D002206 1.8e-11 72.8 37 78.4
MD04G1235700 Malus domestica HOM05D002211 ORTHO05D002206 2.3e-11 72.4 37 81.1
Manes.09G144900 Manihot esculenta HOM05D002211 ORTHO05D002206 2.3e-11 72.4 38 84.2
CiPaw.07G075600 Carya illinoinensis HOM05D002211 ORTHO05D002206 4.0e-11 71.6 39 79.5
Eucgr.H04158 Eucalyptus grandis HOM05D002211 ORTHO05D002206 4.0e-11 71.6 35 88.6
FAN02G1834 Fragaria x ananassa HOM05D002211 ORTHO05D002206 4.0e-11 71.6 37 81.1
FAN05G1484 Fragaria x ananassa HOM05D002211 ORTHO05D002206 4.0e-11 71.6 37 81.1
Potri.019G029600 Populus trichocarpa HOM05D002211 ORTHO05D002206 5.2e-11 71.2 49 67.3
Cpa.g.sc51.66 Carica papaya HOM05D002211 ORTHO05D002206 6.8e-11 70.9 89 46.1
Duzib106G0223 Durio zibethinus HOM05D002211 ORTHO05D002206 6.8e-11 70.9 36 83.3
PGR142G0339 Punica granatum HOM05D002211 ORTHO05D002206 6.8e-11 70.9 41 78.0
RcHm_v2.0_Chr3g0448791 Rosa chinensis HOM05D002211 ORTHO05D002206 6.8e-11 70.9 36 83.3
Thecc.05G260900 Theobroma cacao HOM05D002211 ORTHO05D002206 6.8e-11 70.9 36 83.3
CANSAT54G2545 Cannabis sativa HOM05D002211 ORTHO05D002206 8.8e-11 70.5 36 83.3
vmacro10391 Vaccinium macrocarpon HOM05D002211 ORTHO05D002206 8.8e-11 70.5 46 71.7
Atru.chr2.1234 Acer truncatum HOM05D002211 ORTHO05D002206 1.2e-10 70.1 89 44.9
COL.COLO4_20545 Corchorus olitorius HOM05D002211 ORTHO05D002206 1.2e-10 70.1 53 64.2
Sabra19G0036300 Salix brachista HOM05D002211 ORTHO05D002206 1.2e-10 70.1 46 71.7
Sabra19G0039400 Salix brachista HOM05D002211 ORTHO05D002206 1.2e-10 70.1 46 71.7
Duzib177G1183 Durio zibethinus HOM05D002211 ORTHO05D002206 1.5e-10 69.7 36 80.6
Eucgr.B02173 Eucalyptus grandis HOM05D002211 ORTHO05D002206 1.5e-10 69.7 47 66.0
unitig_37.g12278 Utricularia gibba HOM05D002211 ORTHO05D002206 1.5e-10 69.7 41 75.6
Potri.013G052600 Populus trichocarpa HOM05D002211 ORTHO05D002206 2.6e-10 68.9 50 64.0
arahy.Tifrunner.gnm1.ann1.ML5U0X Arachis hypogaea HOM05D002211 ORTHO05D002206 3.4e-10 68.6 39 74.4
A10p21210 Brassica napus HOM05D002211 ORTHO05D002206 3.4e-10 68.6 37 86.5
C09p58640 Brassica napus HOM05D002211 ORTHO05D002206 3.4e-10 68.6 37 86.5
BolC9t58706H Brassica oleracea HOM05D002211 ORTHO05D002206 3.4e-10 68.6 37 86.5
BraA10t44184Z Brassica rapa HOM05D002211 ORTHO05D002206 3.4e-10 68.6 37 86.5
Gohir.D13G105700 Gossypium hirsutum HOM05D002211 ORTHO05D002206 3.4e-10 68.6 38 76.3
Gorai.011G084500 Gossypium raimondii HOM05D002211 ORTHO05D002206 3.4e-10 68.6 38 76.3
Gorai.013G118400 Gossypium raimondii HOM05D002211 ORTHO05D002206 3.4e-10 68.6 38 76.3
Cc09_g03180 Coffea canephora HOM05D002211 ORTHO05D002206 4.4e-10 68.2 36 77.8
Lalb_Chr04g0261851 Lupinus albus HOM05D002211 ORTHO05D002206 4.4e-10 68.2 50 60.0
Peaxi162Scf00071g00139 Petunia axillaris HOM05D002211 ORTHO05D002206 4.4e-10 68.2 46 65.2
Rhsim09G0131800 Rhododendron simsii HOM05D002211 ORTHO05D002206 4.4e-10 68.2 43 72.1
GSVIVG01026373001 Vitis vinifera HOM05D002211 ORTHO05D002206 4.4e-10 68.2 48 64.6
Duzib128G1915 Durio zibethinus HOM05D002211 ORTHO05D002206 5.7e-10 67.8 51 60.8
Sabra13G0047200 Salix brachista HOM05D002211 ORTHO05D002206 5.7e-10 67.8 53 58.5
THA.LOC104827277 Tarenaya hassleriana HOM05D002211 ORTHO05D002206 5.7e-10 67.8 39 76.9
BcaB08g36688 Brassica carinata HOM05D002211 ORTHO05D002206 7.5e-10 67.4 37 83.8
Hund07149 Selenicereus undatus HOM05D002211 ORTHO05D002206 7.5e-10 67.4 44 70.5
Gohir.D08G053500 Gossypium hirsutum HOM05D002211 ORTHO05D002206 9.8e-10 67.0 38 73.7
Gohir.D10G077733 Gossypium hirsutum HOM05D002211 ORTHO05D002206 9.8e-10 67.0 38 73.7
Gohir.D10G077875 Gossypium hirsutum HOM05D002211 ORTHO05D002206 1.3e-09 66.6 38 73.7
Gorai.013G198900 Gossypium raimondii HOM05D002211 ORTHO05D002206 1.7e-09 66.2 36 75.0
TPR.G4687 Trifolium pratense HOM05D002211 ORTHO05D002206 1.7e-09 66.2 77 44.2
Medtr7g116610 Medicago truncatula HOM05D002211 ORTHO05D002206 2.2e-09 65.9 86 46.5
EL10Ac4g09798 Beta vulgaris HOM05D002211 ORTHO05D002206 2.8e-09 65.5 46 67.4
Ca_09451_v3 Cicer arietinum L. HOM05D002211 ORTHO05D002206 2.8e-09 65.5 39 69.2
Dinv10852 Davidia involucrata HOM05D002211 ORTHO05D002206 2.8e-09 65.5 49 65.3
Lalb_Chr02g0149321 Lupinus albus HOM05D002211 ORTHO05D002206 2.8e-09 65.5 36 75.0
THA.LOC104820745 Tarenaya hassleriana HOM05D002211 ORTHO05D002206 2.8e-09 65.5 34 82.4
Ciclev10022368m.g Citrus clementina HOM05D002211 ORTHO05D002206 3.7e-09 65.1 53 60.4
Phvul.006G108100 Phaseolus vulgaris HOM05D002211 ORTHO05D002206 4.9e-09 64.7 36 77.8
VMungo0540G2450 Vigna mungo HOM05D002211 ORTHO05D002206 4.9e-09 64.7 36 77.8
Psat3g005480 Pisum sativum HOM05D002211 ORTHO05D002206 6.3e-09 64.3 39 74.4
Sp6g26000 Schrenkiella parvula HOM05D002211 ORTHO05D002206 6.3e-09 64.3 38 76.3
Actinidia34770 Actinidia chinensis HOM05D002211 ORTHO05D002206 8.3e-09 63.9 52 61.5
Glyma.03G253400 Glycine max HOM05D002211 ORTHO05D002206 8.3e-09 63.9 35 80.0
Glyma.19G250900 Glycine max HOM05D002211 ORTHO05D002206 8.3e-09 63.9 35 80.0
AL6G29540 Arabidopsis lyrata HOM05D002211 ORTHO05D002206 1.1e-08 63.5 38 73.7
Gohir.A13G102400 Gossypium hirsutum HOM05D002211 ORTHO05D002206 1.1e-08 63.5 35 74.3
Psat3g005600 Pisum sativum HOM05D002211 ORTHO05D002206 1.1e-08 63.5 76 46.1
C02p09800 Brassica napus HOM05D002211 ORTHO05D002206 1.4e-08 63.2 34 79.4
BolC2t06888H Brassica oleracea HOM05D002211 ORTHO05D002206 1.4e-08 63.2 34 79.4
BraA02t05441Z Brassica rapa HOM05D002211 ORTHO05D002206 1.4e-08 63.2 34 79.4
Thhalv10014852m.g Eutrema salsugineum HOM05D002211 ORTHO05D002206 1.4e-08 63.2 34 79.4
Psat0s3509g0040 Pisum sativum HOM05D002211 ORTHO05D002206 1.4e-08 63.2 39 71.8
Potri.015G040500 Populus trichocarpa HOM05D002211 ORTHO05D002206 1.4e-08 63.2 48 62.5
Actinidia38919 Actinidia chinensis HOM05D002211 ORTHO05D002206 2.4e-08 62.4 52 57.7
A02p04820 Brassica napus HOM05D002211 ORTHO05D002206 7.0e-08 60.8 34 73.5
Nn1g08275 Nelumbo nucifera HOM05D002211 ORTHO05D002206 9.2e-08 60.5 38 68.4
Lj1g0002409 Lotus japonicus HOM05D002211 ORTHO05D002206 1.2e-07 60.1 33 72.7
Solyc04g050790.3 Solanum lycopersicum HOM05D002211 ORTHO05D002206 1.6e-07 59.7 37 75.7
Sopen04g021740 Solanum pennellii HOM05D002211 ORTHO05D002206 1.6e-07 59.7 37 75.7
TAR636G2930 Trochodendron aralioides HOM05D002211 ORTHO05D002206 1.6e-07 59.7 39 69.2
CARHR194750 Cardamine hirsuta HOM05D002211 ORTHO05D002206 2.0e-07 59.3 38 71.1
Psat0s3038g0080 Pisum sativum HOM05D002211 ORTHO05D002206 2.0e-07 59.3 39 66.7
PGSC0003DMG400004509 Solanum tuberosum HOM05D002211 ORTHO05D002206 2.0e-07 59.3 34 79.4
MELO3C008671.2 Cucumis melo HOM05D002211 ORTHO05D002206 2.7e-07 58.9 39 71.8
CsaV3_2G010180 Cucumis sativus L. HOM05D002211 ORTHO05D002206 2.7e-07 58.9 39 71.8
Phvul.008G137200 Phaseolus vulgaris HOM05D002211 ORTHO05D002206 2.7e-07 58.9 58 51.7
ATR0686G227 Amborella trichopoda HOM05D002211 ORTHO05D002206 3.5e-07 58.5 37 70.3
PSO357G0293 Papaver somniferum HOM05D002211 ORTHO05D002206 3.5e-07 58.5 51 56.9
Sed0010531 Sechium edule HOM05D002211 ORTHO05D002206 3.5e-07 58.5 32 78.1
TAR633G0017 Trochodendron aralioides HOM05D002211 ORTHO05D002206 3.5e-07 58.5 39 66.7
Aqoxy5G00107 Aquilegia oxysepala HOM05D002211 ORTHO05D002206 4.5e-07 58.2 88 40.9
ClCG11G010190 Citrullus lanatus HOM05D002211 ORTHO05D002206 7.7e-07 57.4 39 69.2
PSO170G3935 Papaver somniferum HOM05D002211 ORTHO05D002206 7.7e-07 57.4 51 56.9
HPP92_024641 Vanilla planifolia HOM05D002211 ORTHO05D002206 7.7e-07 57.4 38 65.8
VMungo1383G1511 Vigna mungo HOM05D002211 ORTHO05D002206 7.7e-07 57.4 37 64.9
DCAR_005529 Daucus carota HOM05D002211 ORTHO05D002206 1.3e-06 56.6 31 77.4
TAR362G0774 Trochodendron aralioides HOM05D002211 ORTHO05D002206 1.3e-06 56.6 39 61.5
HPP92_021397 Vanilla planifolia HOM05D002211 ORTHO05D002206 1.3e-06 56.6 42 61.9
Aa31LG11G11290 Aethionema arabicum HOM05D002211 ORTHO05D002206 2.3e-06 55.8 33 78.8
Carub.0006s1659 Capsella rubella HOM05D002211 ORTHO05D002206 2.3e-06 55.8 34 67.6
Lsat_1_v5_gn_8_97941 Lactuca sativa HOM05D002211 ORTHO05D002206 2.3e-06 55.8 55 49.1
Glyma.08G344400 Glycine max HOM05D002211 ORTHO05D002206 2.9e-06 55.5 59 50.8
TAR365G0725 Trochodendron aralioides HOM05D002211 ORTHO05D002206 2.9e-06 55.5 39 66.7
Psat3g004920 Pisum sativum HOM05D002211 ORTHO05D002206 3.8e-06 55.1 34 67.6
MBI07_g44687_MAGBIO Magnolia biondii HOM05D002211 ORTHO05D002206 8.6e-06 53.9 37 64.9
TWI36G0467 Tripterygium wilfordii HOM05D002211 ORTHO05D002206 8.6e-06 53.9 39 61.5


User provided reference genes

Program Settings