Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra19G0136500 Salix brachista HOM05D006426 ORTHO05D007737 3.9e-241 837.8 445 100.0
Sabra19G0117200 Salix brachista HOM05D006426 ORTHO05D007737 4.0e-238 827.8 445 98.9
Potri.019G116200 Populus trichocarpa HOM05D006426 ORTHO05D007737 1.5e-221 772.7 443 92.8
Potri.013G147500 Populus trichocarpa HOM05D006426 ORTHO05D007737 1.5e-197 693.0 447 83.0
Sabra13G0119100 Salix brachista HOM05D006426 ORTHO05D007737 9.1e-190 667.2 446 80.5
Manes.13G151600 Manihot esculenta HOM05D006426 ORTHO05D007737 5.2e-145 518.5 449 68.4
Manes.12G083000 Manihot esculenta HOM05D006426 ORTHO05D007737 3.3e-139 499.2 448 65.0
Gohir.A03G160000 Gossypium hirsutum HOM05D006426 ORTHO05D007737 1.0e-124 451.1 466 58.6
Gorai.005G205500 Gossypium raimondii HOM05D006426 ORTHO05D007737 1.7e-124 450.3 466 58.6
Gohir.D02G183100 Gossypium hirsutum HOM05D006426 ORTHO05D007737 5.1e-124 448.7 466 58.4
Thecc.02G171600 Theobroma cacao HOM05D006426 ORTHO05D007737 4.7e-122 442.2 475 58.3
QL08p037311 Quercus lobata HOM05D006426 ORTHO05D007737 2.0e-120 436.8 472 58.3
COL.COLO4_13683 Corchorus olitorius HOM05D006426 ORTHO05D007737 3.5e-117 426.0 473 57.1
Haze_13087 Corylus avellana HOM05D006426 ORTHO05D007737 2.3e-116 423.3 470 57.7
Cfa014544 Carpinus fangiana HOM05D006426 ORTHO05D007737 6.6e-116 421.8 464 57.5
Duzib248G1395 Durio zibethinus HOM05D006426 ORTHO05D007737 8.7e-116 421.4 470 56.2
TWI36G1326 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 3.3e-115 419.5 468 55.1
Duzib132G0414 Durio zibethinus HOM05D006426 ORTHO05D007737 2.1e-114 416.8 468 57.3
TWI75G1119 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 2.1e-114 416.8 466 54.5
Ciclev10015289m.g Citrus clementina HOM05D006426 ORTHO05D007737 4.8e-114 415.6 463 57.2
TWI18G0136 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 2.4e-113 413.3 459 54.9
CiPaw.04G122700 Carya illinoinensis HOM05D006426 ORTHO05D007737 1.4e-110 404.1 460 55.9
Cpa.g.sc34.90 Carica papaya HOM05D006426 ORTHO05D007737 3.6e-106 389.4 474 54.0
Dinv15495 Davidia involucrata HOM05D006426 ORTHO05D007737 3.8e-103 379.4 488 51.6
MD09G1096400 Malus domestica HOM05D006426 ORTHO05D007737 3.8e-103 379.4 476 53.8
Prupe.3G231100 Prunus persica HOM05D006426 ORTHO05D007737 2.4e-102 376.7 475 53.9
MD17G1084500 Malus domestica HOM05D006426 ORTHO05D007737 1.8e-100 370.5 475 52.8
RcHm_v2.0_Chr2g0161781 Rosa chinensis HOM05D006426 ORTHO05D007737 3.0e-100 369.8 466 53.6
FAN02G4384 Fragaria x ananassa HOM05D006426 ORTHO05D007737 9.0e-97 358.2 466 52.8
Rhsim06G0152100 Rhododendron simsii HOM05D006426 ORTHO05D007737 1.2e-96 357.8 496 51.4
PGSC0003DMG400018371 Solanum tuberosum HOM05D006426 ORTHO05D007737 1.2e-96 357.8 487 49.7
FAN09G0359 Fragaria x ananassa HOM05D006426 ORTHO05D007737 1.5e-96 357.5 466 52.6
CAN.G508.22 Capsicum annuum HOM05D006426 ORTHO05D007737 4.5e-96 355.9 476 50.4
Sopen07g028590 Solanum pennellii HOM05D006426 ORTHO05D007737 7.6e-96 355.1 487 49.1
Solyc07g054690.1 Solanum lycopersicum HOM05D006426 ORTHO05D007737 1.0e-95 354.8 487 48.9
AUR62037610 Chenopodium quinoa HOM05D006426 ORTHO05D008399 8.4e-95 351.7 484 49.0
Nn1g03877 Nelumbo nucifera HOM05D006426 ORTHO05D007737 2.5e-94 350.1 469 49.7
Nitab4.5_0001871g0070 Nicotiana tabacum HOM05D006426 ORTHO05D007737 2.5e-94 350.1 490 48.8
Cc05_g06260 Coffea canephora HOM05D006426 ORTHO05D007737 4.2e-94 349.4 501 48.5
TAR627G1051 Trochodendron aralioides HOM05D006426 ORTHO05D007737 2.1e-93 347.1 462 49.6
FvH4_6g44570 Fragaria vesca HOM05D006426 ORTHO05D007737 4.6e-93 345.9 467 51.8
Hma1.2p1_0565F.1_g179550 Hydrangea macrophylla HOM05D006426 ORTHO05D007737 2.3e-92 343.6 450 51.6
FAN14G1414 Fragaria x ananassa HOM05D006426 ORTHO05D007737 3.0e-92 343.2 467 51.6
EL10Ac9g20938 Beta vulgaris HOM05D006426 ORTHO05D007737 7.4e-91 338.6 492 50.6
Actinidia12458 Actinidia chinensis HOM05D006426 ORTHO05D007737 5.3e-89 332.4 481 49.7
Nitab4.5_0002370g0070 Nicotiana tabacum HOM05D006426 ORTHO05D007737 9.0e-89 331.6 492 49.0
Peaxi162Scf00007g00272 Petunia axillaris HOM05D006426 ORTHO05D007737 2.6e-88 330.1 488 48.0
PGR042G3565 Punica granatum HOM05D006426 ORTHO05D007737 5.8e-88 328.9 482 50.0
Ah.01g003530 Amaranthus hybridus HOM05D006426 ORTHO05D007737 1.7e-87 327.4 489 47.6
Actinidia09902 Actinidia chinensis HOM05D006426 ORTHO05D007737 2.5e-86 323.6 458 48.9
MSTRG.14180 Avicennia marina HOM05D006426 ORTHO05D007737 9.3e-86 321.6 493 47.9
TAR626G1919 Trochodendron aralioides HOM05D006426 ORTHO05D007737 1.8e-81 307.4 465 44.7
Oeu025481.1 Olea europaea HOM05D006426 ORTHO05D007737 1.3e-79 301.2 530 43.8
Oeu018075.1 Olea europaea HOM05D006426 ORTHO05D007737 8.5e-79 298.5 493 46.0
Eucgr.A01776 Eucalyptus grandis HOM05D006426 ORTHO05D007737 3.2e-78 296.6 432 49.1
Atru.chr6.3076 Acer truncatum HOM05D006426 ORTHO05D007737 9.4e-78 295.0 311 59.2
THA.LOC104804065 Tarenaya hassleriana HOM05D006426 ORTHO05D007737 1.2e-77 294.7 466 46.8
Migut.H01020 Erythranthe guttata HOM05D006426 ORTHO05D007737 7.9e-77 292.0 496 46.4
Thhalv10025277m.g Eutrema salsugineum HOM05D006426 ORTHO05D007737 1.0e-76 291.6 436 47.0
DCAR_009725 Daucus carota HOM05D006426 ORTHO05D007737 5.1e-76 289.3 477 45.1
AL7G24370 Arabidopsis lyrata HOM05D006426 ORTHO05D007737 1.1e-75 288.1 416 48.6
Sc06g0009150 Simmondsia chinensis HOM05D006426 ORTHO05D007737 3.3e-75 286.6 472 45.6
ClCG02G017320 Citrullus lanatus HOM05D006426 ORTHO05D007737 2.8e-74 283.5 480 46.2
TAR629G2656 Trochodendron aralioides HOM05D006426 ORTHO05D007737 1.1e-73 281.6 426 45.8
Carub.0007s1253 Capsella rubella HOM05D006426 ORTHO05D007737 4.1e-73 279.6 416 47.8
CARHR235940 Cardamine hirsuta HOM05D006426 ORTHO05D007737 1.5e-72 277.7 435 46.9
AT4G28230 Arabidopsis thaliana HOM05D006426 ORTHO05D007737 7.7e-72 275.4 414 46.4
Lj8P117T60 Lonicera japonica HOM05D006426 ORTHO05D007737 7.7e-72 275.4 351 52.7
arahy.Tifrunner.gnm1.ann1.2866YZ Arachis hypogaea HOM05D006426 ORTHO05D007737 6.5e-71 272.3 491 42.0
arahy.Tifrunner.gnm1.ann1.512YGT Arachis hypogaea HOM05D006426 ORTHO05D007737 2.7e-69 266.9 491 41.5
SalBow1G4632 Salvia bowleyana HOM05D006426 ORTHO05D007737 5.1e-68 262.7 476 42.9
Aa31LG2G22090 Aethionema arabicum HOM05D006426 ORTHO05D007737 9.7e-67 258.5 421 45.6
MELO3C013535.2 Cucumis melo HOM05D006426 ORTHO05D007737 1.7e-66 257.7 469 42.4
Sp7g26190 Schrenkiella parvula HOM05D006426 ORTHO05D007737 3.1e-65 253.4 451 44.6
CsaV3_6G012420 Cucumis sativus L. HOM05D006426 ORTHO05D007737 5.3e-65 252.7 475 43.6
BcaNung01587 Brassica carinata HOM05D006426 ORTHO05D007737 5.9e-64 249.2 421 46.8
A01p19640 Brassica napus HOM05D006426 ORTHO05D007737 3.8e-63 246.5 421 44.9
Sed0007067 Sechium edule HOM05D006426 ORTHO05D007737 3.8e-63 246.5 463 41.9
BraA01t01897Z Brassica rapa HOM05D006426 ORTHO05D007737 5.7e-59 232.6 420 43.3
SGA_v2.0_scaffold49G18304 Striga asiatica HOM05D006426 ORTHO05D007737 8.2e-58 228.8 491 41.1
Aqoxy1G03895 Aquilegia oxysepala HOM05D006426 ORTHO05D007737 2.4e-57 227.3 534 38.0
DCAR_012977 Daucus carota HOM05D006426 ORTHO05D007737 1.6e-56 224.6 447 37.6
PSO832G1174 Papaver somniferum HOM05D006426 ORTHO05D007737 2.0e-56 224.2 463 40.2
MBI18_g45419_MAGBIO Magnolia biondii HOM05D006426 ORTHO05D007737 3.5e-56 223.4 486 39.7
unitig_52.g17339 Utricularia gibba HOM05D006426 ORTHO05D007737 4.5e-56 223.0 469 41.4
PSO210G4394 Papaver somniferum HOM05D006426 ORTHO05D007737 2.9e-55 220.3 469 39.2
C01p24670 Brassica napus HOM05D006426 ORTHO05D007737 1.1e-54 218.4 421 42.5
BolC1t02416H Brassica oleracea HOM05D006426 ORTHO05D007737 1.5e-54 218.0 421 42.5
Lsat_1_v5_gn_4_69460 Lactuca sativa HOM05D006426 ORTHO05D007737 1.6e-53 214.5 466 39.1
BcaC09g50504 Brassica carinata HOM05D006426 ORTHO05D007737 1.0e-52 211.8 423 42.6
Lj3g0000273 Lotus japonicus HOM05D006426 ORTHO05D007737 3.0e-52 210.3 478 38.1
HanXRQChr15g0488091 Helianthus annuus HOM05D006426 ORTHO05D007737 8.3e-50 202.2 453 38.4
Lalb_Chr01g0017281 Lupinus albus HOM05D006426 ORTHO05D007737 6.5e-47 192.6 481 34.5
ECA232G2383 Erigeron canadensis HOM05D006426 ORTHO05D007737 2.5e-46 190.7 469 38.2
PSO541G1576 Papaver somniferum HOM05D006426 ORTHO05D007737 9.4e-46 188.7 494 37.7
SabraUnG0004200 Salix brachista HOM05D006426 ORTHO05D007737 9.4e-46 188.7 97 97.9
PSO675G8522 Papaver somniferum HOM05D006426 ORTHO05D007737 1.6e-45 188.0 495 37.6
Phvul.005G017100 Phaseolus vulgaris HOM05D006426 ORTHO05D007737 1.8e-44 184.5 443 37.5
VMungo1080G0900 Vigna mungo HOM05D006426 ORTHO05D007737 4.4e-43 179.9 445 36.9
Sed0009175 Sechium edule HOM05D006426 ORTHO05D007737 4.9e-42 176.4 365 38.4
ATR0693G210 Amborella trichopoda HOM05D006426 ORTHO05D007737 1.9e-38 164.5 521 34.4
Glyma.11G158800 Glycine max HOM05D006426 ORTHO05D007737 3.6e-37 160.2 442 34.4
SGA_v2.0_scaffold159G37625 Striga asiatica HOM05D006426 ORTHO05D007737 3.6e-37 160.2 325 39.1
Medtr3g013540 Medicago truncatula HOM05D006426 ORTHO05D007737 4.4e-35 153.3 470 34.9
Glyma.04G132700 Glycine max HOM05D006426 ORTHO05D007737 7.5e-35 152.5 445 33.7
Psat5g223040 Pisum sativum HOM05D006426 ORTHO05D007737 4.6e-32 143.3 466 33.0
TPR.G1458 Trifolium pratense HOM05D006426 ORTHO05D007737 2.4e-25 120.9 472 32.0
Ca_18074_v3 Cicer arietinum L. HOM05D006426 ORTHO05D007737 1.6e-24 118.2 453 33.3
GSVIVG01030006001 Vitis vinifera HOM05D006426 ORTHO05D007737 3.9e-23 113.6 161 49.1
CDE10G0475 Ceratophyllum demersum HOM05D006426 ORTHO05D007737 1.1e-22 112.1 496 28.2
Lj1P736T39 Lonicera japonica HOM05D006426 ORTHO05D007737 1.9e-22 111.3 183 45.9
FvH4_6g44594 Fragaria vesca HOM05D006426 ORTHO05D007737 5.2e-20 103.2 182 45.6
HPP92_011117 Vanilla planifolia HOM05D006426 ORTHO05D007737 1.2e-16 92.0 409 30.3
HPP92_011122 Vanilla planifolia HOM05D006426 ORTHO05D007737 2.1e-16 91.3 367 31.3
unitig_62.g23190 Utricularia gibba HOM05D006426 ORTHO05D007737 3.9e-15 87.0 162 37.0
Oeu029930.1 Olea europaea HOM05D006426 ORTHO05D007737 5.2e-12 76.6 154 42.2
Atru.chr6.3075 Acer truncatum HOM05D006426 ORTHO05D007737 9.9e-11 72.4 71 52.1
Oeu035359.1 Olea europaea HOM05D006426 ORTHO05D007737 1.7e-10 71.6 155 38.7
SGA_v2.0_scaffold51G18895 Striga asiatica HOM05D001803 ORTHO05D001686 2.9e-10 70.9 166 35.5
Oeu003230.1 Olea europaea HOM05D006426 ORTHO05D007737 3.2e-09 67.4 152 40.1
SEGI_03078 Sequoiadendron giganteum HOM05D036155 ORTHO05D007737 5.1e-07 60.1 575 25.6
Os06g0683900 Oryza sativa ssp. japonica HOM05D032587 ORTHO05D037111 3.3e-06 57.4 125 37.6


User provided reference genes

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