Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra19G0118200 Salix brachista HOM05D007836 ORTHO05D009876 7.9e-49 196.8 101 100.0
Potri.019G117800 Populus trichocarpa HOM05D007836 ORTHO05D009876 2.7e-33 145.2 92 82.6
Sabra19G0135400 Salix brachista HOM05D007836 ORTHO05D009876 3.2e-26 121.7 66 98.5
Potri.013G148300 Populus trichocarpa HOM05D007836 ORTHO05D009876 4.3e-23 111.3 92 71.7
Manes.13G152300 Manihot esculenta HOM05D007836 ORTHO05D009876 3.8e-19 98.2 90 61.1
QL08p037020 Quercus lobata HOM05D007836 ORTHO05D009876 2.5e-18 95.5 91 53.8
Cfa014529 Carpinus fangiana HOM05D007836 ORTHO05D009876 3.0e-16 88.6 98 56.1
COL.COLO4_13657 Corchorus olitorius HOM05D007836 ORTHO05D009876 1.3e-14 83.2 91 51.6
CiPaw.03G168400 Carya illinoinensis HOM05D007836 ORTHO05D009876 1.7e-14 82.8 88 51.1
Thecc.02G170500 Theobroma cacao HOM05D007836 ORTHO05D009876 2.2e-14 82.4 92 52.2
Ciclev10018116m.g Citrus clementina HOM05D007836 ORTHO05D009876 1.1e-13 80.1 90 50.0
Ciclev10017323m.g Citrus clementina HOM05D007836 ORTHO05D009876 1.4e-13 79.7 93 53.8
Nn1g03860 Nelumbo nucifera HOM05D007836 ORTHO05D009876 4.1e-13 78.2 92 50.0
Nn1g03862 Nelumbo nucifera HOM05D007836 ORTHO05D009876 4.1e-13 78.2 92 50.0
CiPaw.10G117600 Carya illinoinensis HOM05D007836 ORTHO05D009876 7.0e-13 77.4 92 48.9
Medtr2g011690 Medicago truncatula HOM05D007836 ORTHO05D009876 1.2e-12 76.6 94 47.9
Thecc.06G201100 Theobroma cacao HOM05D007836 ORTHO05D009876 2.0e-12 75.9 95 47.4
Potri.004G033300 Populus trichocarpa HOM05D007836 ORTHO05D009876 2.6e-12 75.5 93 49.5
Sabra04G0019100 Salix brachista HOM05D007836 ORTHO05D009876 3.5e-12 75.1 93 49.5
QL05p081073 Quercus lobata HOM05D007836 ORTHO05D009876 4.5e-12 74.7 86 48.8
COL.COLO4_31599 Corchorus olitorius HOM05D007836 ORTHO05D009876 5.9e-12 74.3 92 48.9
Psat1g208960 Pisum sativum HOM05D007836 ORTHO05D009876 7.7e-12 73.9 94 46.8
Ca_00250_v3 Cicer arietinum L. HOM05D007836 ORTHO05D009876 2.2e-11 72.4 94 47.9
Ca_29769_v3 Cicer arietinum L. HOM05D007836 ORTHO05D009876 2.2e-11 72.4 94 47.9
Ca_29839_v3 Cicer arietinum L. HOM05D007836 ORTHO05D009876 2.2e-11 72.4 94 47.9
Migut.M01222 Erythranthe guttata HOM05D007836 ORTHO05D009876 2.9e-11 72.0 82 47.6
Glyma.13G247000 Glycine max HOM05D007836 ORTHO05D009876 8.5e-11 70.5 94 47.9
Haze_06588 Corylus avellana HOM05D007836 ORTHO05D009876 3.2e-10 68.6 75 53.3
Cfa000343 Carpinus fangiana HOM05D007836 ORTHO05D009876 4.2e-10 68.2 75 54.7
TPR.G36842 Trifolium pratense HOM05D007836 ORTHO05D009876 4.2e-10 68.2 92 43.5
Manes.16G019800 Manihot esculenta HOM05D007836 ORTHO05D009876 5.5e-10 67.8 93 46.2
TAR629G2038 Trochodendron aralioides HOM05D007836 ORTHO05D009876 7.2e-10 67.4 93 47.3
TWI38G1692 Tripterygium wilfordii HOM05D007836 ORTHO05D009876 1.6e-09 66.2 92 52.2
Manes.12G082200 Manihot esculenta HOM05D007836 ORTHO05D009876 2.7e-09 65.5 75 56.0
MBI18_g27690_MAGBIO Magnolia biondii HOM05D007836 ORTHO05D009876 3.6e-09 65.1 92 46.7
Hma1.2p1_1182F.1_g264760 Hydrangea macrophylla HOM05D007836 ORTHO05D009876 6.1e-09 64.3 83 50.6
TAR627G0603 Trochodendron aralioides HOM05D007836 ORTHO05D009876 1.0e-08 63.5 87 43.7
Atru.chr6.3083 Acer truncatum HOM05D007836 ORTHO05D009876 1.8e-08 62.8 104 44.2
Potri.011G041700 Populus trichocarpa HOM05D007836 ORTHO05D009876 1.8e-08 62.8 89 44.9
Prupe.4G035300 Prunus persica HOM05D007836 ORTHO05D009876 3.0e-08 62.0 92 43.5
Gohir.A10G021700 Gossypium hirsutum HOM05D007836 ORTHO05D009876 4.0e-08 61.6 92 42.4
Gorai.011G023600 Gossypium raimondii HOM05D007836 ORTHO05D009876 6.7e-08 60.8 94 41.5
Nitab4.5_0000649g0060 Nicotiana tabacum HOM05D007836 ORTHO05D009876 2.0e-07 59.3 81 46.9
FAN11G3258 Fragaria x ananassa HOM05D007836 ORTHO05D009876 3.3e-07 58.5 96 42.7
Lalb_Chr20g0122321 Lupinus albus HOM05D007836 ORTHO05D009876 3.3e-07 58.5 93 44.1
Rhsim02G0119100 Rhododendron simsii HOM05D007836 ORTHO05D009876 3.3e-07 58.5 74 51.4
Sabra11G0028600 Salix brachista HOM05D007836 ORTHO05D009876 3.3e-07 58.5 90 43.3
Gohir.D10G022500 Gossypium hirsutum HOM05D007836 ORTHO05D009876 5.7e-07 57.8 99 39.4
Gohir.D13G064750 Gossypium hirsutum HOM05D007836 ORTHO05D009876 1.7e-06 56.2 75 45.3
Gorai.013G073500 Gossypium raimondii HOM05D007836 ORTHO05D009876 1.7e-06 56.2 75 45.3
Manes.03G117300 Manihot esculenta HOM05D000831 ORTHO05D000660 2.8e-06 55.5 29 82.8
Nitab4.5_0005389g0040 Nicotiana tabacum HOM05D007836 ORTHO05D009876 3.7e-06 55.1 81 43.2
Gohir.A13G057150 Gossypium hirsutum HOM05D007836 ORTHO05D009876 4.8e-06 54.7 75 44.0
AUR62015588 Chenopodium quinoa HOM05D000831 ORTHO05D000660 6.3e-06 54.3 63 46.0
Ah.06g183450 Amaranthus hybridus HOM05D000831 ORTHO05D000660 8.2e-06 53.9 63 47.6
AL1G47760 Arabidopsis lyrata HOM05D000831 ORTHO05D000660 8.2e-06 53.9 24 91.7
AUR62029301 Chenopodium quinoa HOM05D000831 ORTHO05D000660 8.2e-06 53.9 63 46.0


User provided reference genes

Program Settings