Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra19G0117200 Salix brachista HOM05D006426 ORTHO05D007737 1.0e-241 839.7 445 100.0
Sabra19G0136500 Salix brachista HOM05D006426 ORTHO05D007737 5.2e-238 827.4 445 98.9
Potri.019G116200 Populus trichocarpa HOM05D006426 ORTHO05D007737 6.9e-222 773.9 443 92.8
Potri.013G147500 Populus trichocarpa HOM05D006426 ORTHO05D007737 8.5e-196 687.2 447 82.6
Sabra13G0119100 Salix brachista HOM05D006426 ORTHO05D007737 5.0e-188 661.4 446 80.0
Manes.13G151600 Manihot esculenta HOM05D006426 ORTHO05D007737 2.6e-144 516.2 449 68.2
Manes.12G083000 Manihot esculenta HOM05D006426 ORTHO05D007737 1.4e-137 493.8 448 64.3
Gohir.A03G160000 Gossypium hirsutum HOM05D006426 ORTHO05D007737 7.3e-123 444.9 466 57.9
Gorai.005G205500 Gossypium raimondii HOM05D006426 ORTHO05D007737 1.2e-122 444.1 466 57.9
Gohir.D02G183100 Gossypium hirsutum HOM05D006426 ORTHO05D007737 3.6e-122 442.6 466 57.7
Thecc.02G171600 Theobroma cacao HOM05D006426 ORTHO05D007737 1.5e-120 437.2 475 57.3
QL08p037311 Quercus lobata HOM05D006426 ORTHO05D007737 2.6e-120 436.4 472 58.3
Haze_13087 Corylus avellana HOM05D006426 ORTHO05D007737 2.3e-116 423.3 470 57.7
COL.COLO4_13683 Corchorus olitorius HOM05D006426 ORTHO05D007737 3.9e-116 422.5 472 55.9
Cfa014544 Carpinus fangiana HOM05D006426 ORTHO05D007737 6.6e-116 421.8 464 57.5
Duzib248G1395 Durio zibethinus HOM05D006426 ORTHO05D007737 2.1e-114 416.8 470 55.7
TWI36G1326 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 3.6e-114 416.0 468 54.9
TWI75G1119 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 1.4e-113 414.1 466 54.3
Duzib132G0414 Durio zibethinus HOM05D006426 ORTHO05D007737 6.9e-113 411.8 468 56.8
TWI18G0136 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 1.5e-112 410.6 459 54.9
Ciclev10015289m.g Citrus clementina HOM05D006426 ORTHO05D007737 2.0e-112 410.2 463 56.6
CiPaw.04G122700 Carya illinoinensis HOM05D006426 ORTHO05D007737 6.4e-111 405.2 460 55.9
Cpa.g.sc34.90 Carica papaya HOM05D006426 ORTHO05D007737 1.1e-105 387.9 474 54.0
Dinv15495 Davidia involucrata HOM05D006426 ORTHO05D007737 4.9e-103 379.0 487 51.1
MD09G1096400 Malus domestica HOM05D006426 ORTHO05D007737 3.2e-102 376.3 476 53.4
Prupe.3G231100 Prunus persica HOM05D006426 ORTHO05D007737 2.1e-101 373.6 475 53.5
MD17G1084500 Malus domestica HOM05D006426 ORTHO05D007737 1.1e-99 367.9 475 52.4
RcHm_v2.0_Chr2g0161781 Rosa chinensis HOM05D006426 ORTHO05D007737 1.9e-99 367.1 466 52.6
Rhsim06G0152100 Rhododendron simsii HOM05D006426 ORTHO05D007737 1.4e-97 360.9 496 51.6
PGSC0003DMG400018371 Solanum tuberosum HOM05D006426 ORTHO05D007737 3.4e-96 356.3 487 49.7
FAN02G4384 Fragaria x ananassa HOM05D006426 ORTHO05D007737 7.6e-96 355.1 466 51.7
CAN.G508.22 Capsicum annuum HOM05D006426 ORTHO05D007737 1.0e-95 354.8 476 50.6
FAN09G0359 Fragaria x ananassa HOM05D006426 ORTHO05D007737 1.3e-95 354.4 466 51.5
Sopen07g028590 Solanum pennellii HOM05D006426 ORTHO05D007737 1.3e-95 354.4 487 49.3
Solyc07g054690.1 Solanum lycopersicum HOM05D006426 ORTHO05D007737 1.7e-95 354.0 487 49.1
AUR62037610 Chenopodium quinoa HOM05D006426 ORTHO05D008399 8.4e-95 351.7 484 48.8
Nn1g03877 Nelumbo nucifera HOM05D006426 ORTHO05D007737 9.3e-94 348.2 469 49.3
Nitab4.5_0001871g0070 Nicotiana tabacum HOM05D006426 ORTHO05D007737 2.7e-93 346.7 490 48.8
Cc05_g06260 Coffea canephora HOM05D006426 ORTHO05D007737 3.5e-93 346.3 501 47.7
TAR627G1051 Trochodendron aralioides HOM05D006426 ORTHO05D007737 4.6e-93 345.9 462 49.4
Hma1.2p1_0565F.1_g179550 Hydrangea macrophylla HOM05D006426 ORTHO05D007737 6.0e-93 345.5 450 51.8
FvH4_6g44570 Fragaria vesca HOM05D006426 ORTHO05D007737 5.1e-92 342.4 472 50.4
FAN14G1414 Fragaria x ananassa HOM05D006426 ORTHO05D007737 3.3e-91 339.7 472 50.2
EL10Ac9g20938 Beta vulgaris HOM05D006426 ORTHO05D007737 6.9e-89 332.0 493 49.9
Actinidia12458 Actinidia chinensis HOM05D006426 ORTHO05D007737 1.5e-88 330.9 480 49.2
Peaxi162Scf00007g00272 Petunia axillaris HOM05D006426 ORTHO05D007737 5.8e-88 328.9 488 48.2
PGR042G3565 Punica granatum HOM05D006426 ORTHO05D007737 1.3e-87 327.8 482 50.0
Nitab4.5_0002370g0070 Nicotiana tabacum HOM05D006426 ORTHO05D007737 3.8e-87 326.2 492 48.4
Actinidia09902 Actinidia chinensis HOM05D006426 ORTHO05D007737 4.2e-86 322.8 458 48.9
Ah.01g003530 Amaranthus hybridus HOM05D006426 ORTHO05D007737 9.3e-86 321.6 489 46.8
MSTRG.14180 Avicennia marina HOM05D006426 ORTHO05D007737 4.6e-85 319.3 493 47.5
TAR626G1919 Trochodendron aralioides HOM05D006426 ORTHO05D007737 4.1e-81 306.2 465 44.5
Oeu025481.1 Olea europaea HOM05D006426 ORTHO05D007737 3.8e-79 299.7 530 43.4
Oeu018075.1 Olea europaea HOM05D006426 ORTHO05D007737 1.9e-78 297.4 493 46.2
Eucgr.A01776 Eucalyptus grandis HOM05D006426 ORTHO05D007737 4.2e-78 296.2 433 49.9
Atru.chr6.3076 Acer truncatum HOM05D006426 ORTHO05D007737 2.7e-77 293.5 311 59.5
THA.LOC104804065 Tarenaya hassleriana HOM05D006426 ORTHO05D007737 3.6e-77 293.1 466 46.8
Thhalv10025277m.g Eutrema salsugineum HOM05D006426 ORTHO05D007737 2.3e-76 290.4 439 47.6
Migut.H01020 Erythranthe guttata HOM05D006426 ORTHO05D007737 5.1e-76 289.3 496 46.2
Sc06g0009150 Simmondsia chinensis HOM05D006426 ORTHO05D007737 5.1e-76 289.3 472 45.1
AL7G24370 Arabidopsis lyrata HOM05D006426 ORTHO05D007737 2.5e-75 287.0 416 48.6
DCAR_009725 Daucus carota HOM05D006426 ORTHO05D007737 1.7e-74 284.3 476 44.3
TAR629G2656 Trochodendron aralioides HOM05D006426 ORTHO05D007737 8.2e-74 282.0 425 45.6
ClCG02G017320 Citrullus lanatus HOM05D006426 ORTHO05D007737 1.1e-73 281.6 480 46.0
Carub.0007s1253 Capsella rubella HOM05D006426 ORTHO05D007737 9.1e-73 278.5 416 47.8
CARHR235940 Cardamine hirsuta HOM05D006426 ORTHO05D007737 2.6e-72 276.9 438 47.0
AT4G28230 Arabidopsis thaliana HOM05D006426 ORTHO05D007737 3.8e-71 273.1 414 46.1
Lj8P117T60 Lonicera japonica HOM05D006426 ORTHO05D007737 8.5e-71 271.9 354 52.3
arahy.Tifrunner.gnm1.ann1.2866YZ Arachis hypogaea HOM05D006426 ORTHO05D007737 1.4e-70 271.2 491 41.8
arahy.Tifrunner.gnm1.ann1.512YGT Arachis hypogaea HOM05D006426 ORTHO05D007737 6.1e-69 265.8 491 41.3
SalBow1G4632 Salvia bowleyana HOM05D006426 ORTHO05D007737 4.4e-67 259.6 476 42.6
Aa31LG2G22090 Aethionema arabicum HOM05D006426 ORTHO05D007737 5.7e-67 259.2 421 46.1
MELO3C013535.2 Cucumis melo HOM05D006426 ORTHO05D007737 6.3e-66 255.8 469 42.2
Sp7g26190 Schrenkiella parvula HOM05D006426 ORTHO05D007737 5.3e-65 252.7 451 44.6
CsaV3_6G012420 Cucumis sativus L. HOM05D006426 ORTHO05D007737 2.6e-64 250.4 475 43.4
BcaNung01587 Brassica carinata HOM05D006426 ORTHO05D007737 1.0e-63 248.4 424 46.9
A01p19640 Brassica napus HOM05D006426 ORTHO05D007737 6.5e-63 245.7 423 44.7
Sed0007067 Sechium edule HOM05D006426 ORTHO05D007737 1.5e-62 244.6 463 41.7
BraA01t01897Z Brassica rapa HOM05D006426 ORTHO05D007737 1.3e-58 231.5 422 43.1
SGA_v2.0_scaffold49G18304 Striga asiatica HOM05D006426 ORTHO05D007737 2.4e-57 227.3 487 40.7
unitig_52.g17339 Utricularia gibba HOM05D006426 ORTHO05D007737 3.1e-57 226.9 469 41.4
DCAR_012977 Daucus carota HOM05D006426 ORTHO05D007737 9.1e-57 225.3 447 37.6
PSO832G1174 Papaver somniferum HOM05D006426 ORTHO05D007737 1.6e-56 224.6 463 40.0
Aqoxy1G03895 Aquilegia oxysepala HOM05D006426 ORTHO05D007737 4.5e-56 223.0 534 37.6
MBI18_g45419_MAGBIO Magnolia biondii HOM05D006426 ORTHO05D007737 1.0e-55 221.9 482 39.6
PSO210G4394 Papaver somniferum HOM05D006426 ORTHO05D007737 2.2e-55 220.7 469 39.4
C01p24670 Brassica napus HOM05D006426 ORTHO05D007737 1.9e-54 217.6 424 42.7
BolC1t02416H Brassica oleracea HOM05D006426 ORTHO05D007737 2.5e-54 217.2 424 42.7
BcaC09g50504 Brassica carinata HOM05D006426 ORTHO05D007737 8.0e-53 212.2 426 43.0
Lsat_1_v5_gn_4_69460 Lactuca sativa HOM05D006426 ORTHO05D007737 8.0e-53 212.2 466 39.1
Lj3g0000273 Lotus japonicus HOM05D006426 ORTHO05D007737 4.0e-52 209.9 478 38.1
HanXRQChr15g0488091 Helianthus annuus HOM05D006426 ORTHO05D007737 1.1e-49 201.8 453 38.4
Lalb_Chr01g0017281 Lupinus albus HOM05D006426 ORTHO05D007737 1.9e-46 191.0 481 34.3
PSO541G1576 Papaver somniferum HOM05D006426 ORTHO05D007737 7.2e-46 189.1 494 37.7
SabraUnG0004200 Salix brachista HOM05D006426 ORTHO05D007737 9.4e-46 188.7 97 97.9
PSO675G8522 Papaver somniferum HOM05D006426 ORTHO05D007737 1.2e-45 188.3 495 37.6
ECA232G2383 Erigeron canadensis HOM05D006426 ORTHO05D007737 3.6e-45 186.8 469 37.7
Phvul.005G017100 Phaseolus vulgaris HOM05D006426 ORTHO05D007737 1.4e-44 184.9 443 37.5
VMungo1080G0900 Vigna mungo HOM05D006426 ORTHO05D007737 9.8e-43 178.7 445 36.6
Sed0009175 Sechium edule HOM05D006426 ORTHO05D007737 6.3e-42 176.0 366 38.0
ATR0693G210 Amborella trichopoda HOM05D006426 ORTHO05D007737 3.3e-38 163.7 521 33.6
Glyma.11G158800 Glycine max HOM05D006426 ORTHO05D007737 4.7e-37 159.8 442 34.4
SGA_v2.0_scaffold159G37625 Striga asiatica HOM05D006426 ORTHO05D007737 1.8e-36 157.9 325 38.5
Medtr3g013540 Medicago truncatula HOM05D006426 ORTHO05D007737 2.6e-35 154.1 470 34.9
Glyma.04G132700 Glycine max HOM05D006426 ORTHO05D007737 5.7e-35 152.9 445 33.9
Psat5g223040 Pisum sativum HOM05D006426 ORTHO05D007737 5.9e-32 142.9 466 33.0
TPR.G1458 Trifolium pratense HOM05D006426 ORTHO05D007737 5.4e-25 119.8 472 32.0
Ca_18074_v3 Cicer arietinum L. HOM05D006426 ORTHO05D007737 2.0e-24 117.9 453 33.3
GSVIVG01030006001 Vitis vinifera HOM05D006426 ORTHO05D007737 3.9e-23 113.6 161 49.1
CDE10G0475 Ceratophyllum demersum HOM05D006426 ORTHO05D007737 8.6e-23 112.5 496 28.2
Lj1P736T39 Lonicera japonica HOM05D006426 ORTHO05D007737 4.3e-22 110.2 183 45.4
FvH4_6g44594 Fragaria vesca HOM05D006426 ORTHO05D007737 2.6e-19 100.9 182 43.4
HPP92_011117 Vanilla planifolia HOM05D006426 ORTHO05D007737 2.4e-17 94.4 406 29.6
HPP92_011122 Vanilla planifolia HOM05D006426 ORTHO05D007737 1.0e-15 89.0 367 31.3
unitig_62.g23190 Utricularia gibba HOM05D006426 ORTHO05D007737 1.7e-15 88.2 162 37.7
Oeu029930.1 Olea europaea HOM05D006426 ORTHO05D007737 5.2e-12 76.6 154 42.2
Atru.chr6.3075 Acer truncatum HOM05D006426 ORTHO05D007737 9.9e-11 72.4 71 52.1
Oeu035359.1 Olea europaea HOM05D006426 ORTHO05D007737 1.7e-10 71.6 155 38.7
SGA_v2.0_scaffold51G18895 Striga asiatica HOM05D001803 ORTHO05D001686 2.2e-10 71.2 166 34.9
Oeu003230.1 Olea europaea HOM05D006426 ORTHO05D007737 3.2e-09 67.4 152 40.1
SEGI_03078 Sequoiadendron giganteum HOM05D036155 ORTHO05D007737 3.0e-07 60.8 575 25.7


User provided reference genes

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