Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra19G0115100 Salix brachista HOM05D007748 ORTHO05D009345 0.0e+00 1100.5 664 100.0
Sabra19G0138300 Salix brachista HOM05D007748 ORTHO05D009345 1.1e-263 913.3 681 85.6
Potri.019G109200 Populus trichocarpa HOM05D007748 ORTHO05D009345 4.1e-194 682.2 677 70.2
Potri.013G145900 Populus trichocarpa HOM05D007748 ORTHO05D009345 1.7e-123 447.6 682 49.7
Manes.13G151000 Manihot esculenta HOM05D007748 ORTHO05D009345 6.5e-67 259.6 695 35.5
Thecc.02G172800 Theobroma cacao HOM05D007748 ORTHO05D009345 1.8e-32 145.2 684 31.6
TWI18G1232 Tripterygium wilfordii HOM05D007748 ORTHO05D009345 9.2e-29 132.9 700 30.0
Prupe.3G232500 Prunus persica HOM05D007748 ORTHO05D009345 3.5e-28 131.0 674 29.1
COL.COLO4_13689 Corchorus olitorius HOM05D007748 ORTHO05D009345 4.6e-28 130.6 674 31.5
QL08p037531 Quercus lobata HOM05D007748 ORTHO05D009345 8.6e-27 126.3 626 30.5
CiPaw.03G170600 Carya illinoinensis HOM05D007748 ORTHO05D009345 1.6e-25 122.1 676 29.7
Hma1.2p1_0565F.1_g179400 Hydrangea macrophylla HOM05D007748 ORTHO05D009345 1.4e-24 119.0 728 27.7
Atru.chr6.3057 Acer truncatum HOM05D007748 ORTHO05D009345 5.8e-23 113.6 455 33.2
Lalb_Chr19g0135431 Lupinus albus HOM05D007748 ORTHO05D009345 4.9e-22 110.5 187 39.0
Dinv23701 Davidia involucrata HOM05D007748 ORTHO05D009345 1.1e-21 109.4 600 28.7
VMungo1127G2014 Vigna mungo HOM05D007748 ORTHO05D009345 7.0e-21 106.7 187 39.0
Gohir.D02G182800 Gossypium hirsutum HOM05D007748 ORTHO05D009345 1.2e-20 105.9 678 30.2
Phvul.011G112100 Phaseolus vulgaris HOM05D007748 ORTHO05D009345 2.0e-20 105.1 187 38.5
Ca_20695_v3 Cicer arietinum L. HOM05D007748 ORTHO05D009345 3.0e-19 101.3 190 37.9
PGR142G1582 Punica granatum HOM05D007748 ORTHO05D009345 3.9e-19 100.9 194 39.7
Cfa014551 Carpinus fangiana HOM05D007748 ORTHO05D009345 1.9e-18 98.6 678 29.8
Haze_13098 Corylus avellana HOM05D007748 ORTHO05D009345 2.5e-18 98.2 682 30.2
Medtr4g046037 Medicago truncatula HOM05D007748 ORTHO05D009345 1.2e-17 95.9 187 36.9
FAN09G1549 Fragaria x ananassa HOM05D007748 ORTHO05D009345 8.1e-17 93.2 674 25.4
arahy.Tifrunner.gnm1.ann1.MF6V35 Arachis hypogaea HOM05D007748 ORTHO05D009345 1.1e-16 92.8 186 36.0
TPR.G21671 Trifolium pratense HOM05D007748 ORTHO05D009345 2.3e-16 91.7 189 36.0
Duzib052G0236 Durio zibethinus HOM05D007748 ORTHO05D009345 2.0e-15 88.6 673 28.5
Nn1g06734 Nelumbo nucifera HOM05D007748 ORTHO05D009345 2.6e-15 88.2 57 73.7
CAN.G980.12 Capsicum annuum HOM05D012354 ORTHO05D009345 3.4e-15 87.8 197 35.0
Gohir.A03G159700 Gossypium hirsutum HOM05D007748 ORTHO05D009345 2.9e-14 84.7 689 29.2
Gorai.005G205200 Gossypium raimondii HOM05D007748 ORTHO05D009345 2.9e-14 84.7 678 32.3
arahy.Tifrunner.gnm1.ann1.5P5A6I Arachis hypogaea HOM05D007748 ORTHO05D009345 1.1e-13 82.8 656 21.8
PSO675G9319 Papaver somniferum HOM05D007748 ORTHO05D009345 1.4e-13 82.4 561 24.4
Gohir.D13G065125 Gossypium hirsutum HOM05D007748 ORTHO05D009345 1.9e-13 82.0 194 37.6
FAN14G2142 Fragaria x ananassa HOM05D007748 ORTHO05D009345 4.1e-13 80.9 627 25.4
arahy.Tifrunner.gnm1.ann1.SX3Q91 Arachis hypogaea HOM05D007748 ORTHO05D009345 5.4e-13 80.5 654 23.2
TAR627G0547 Trochodendron aralioides HOM05D007748 ORTHO05D009345 5.4e-13 80.5 708 27.1
FvH4_6g44840 Fragaria vesca HOM05D007748 ORTHO05D009345 7.1e-13 80.1 627 25.2
FAN05G3025 Fragaria x ananassa HOM05D007748 ORTHO05D009345 9.2e-13 79.7 642 25.7
AUR62037378 Chenopodium quinoa HOM05D007748 ORTHO05D009345 1.2e-12 79.3 168 36.3
MELO3C013526.2 Cucumis melo HOM05D007748 ORTHO05D009345 1.6e-12 79.0 410 24.9
RcHm_v2.0_Chr2g0162021 Rosa chinensis HOM05D007748 ORTHO05D009345 2.7e-12 78.2 651 25.5
TAR627G0096 Trochodendron aralioides HOM05D007748 ORTHO05D009345 2.7e-12 78.2 679 27.4
ClCG02G017390 Citrullus lanatus HOM05D007748 ORTHO05D009345 1.0e-11 76.3 467 25.1
Ciclev10018063m.g Citrus clementina HOM05D007748 ORTHO05D009345 1.3e-11 75.9 531 25.2
Ah.15g095660 Amaranthus hybridus HOM05D007748 ORTHO05D009345 3.0e-11 74.7 182 30.8
Rhsim06G0150300 Rhododendron simsii HOM05D007748 ORTHO05D009345 1.1e-10 72.8 49 71.4
Sed0012615 Sechium edule HOM05D007748 ORTHO05D009345 1.9e-10 72.0 65 55.4
arahy.Tifrunner.gnm1.ann1.2C7EMU Arachis hypogaea HOM05D007748 ORTHO05D009345 2.5e-10 71.6 60 60.0
Nn1g03923 Nelumbo nucifera HOM05D007748 ORTHO05D009345 1.2e-09 69.3 652 23.0
Sopen07g028340 Solanum pennellii HOM05D012354 ORTHO05D009345 2.1e-09 68.6 58 55.2
Glyma.06G297400 Glycine max HOM05D007748 ORTHO05D009345 3.6e-09 67.8 663 28.1
CsaV3_6G012500 Cucumis sativus L. HOM05D007748 ORTHO05D009345 4.7e-09 67.4 489 24.7
Actinidia09898 Actinidia chinensis HOM05D007748 ORTHO05D009345 6.2e-09 67.0 632 26.9
CAN.G248.60 Capsicum annuum HOM05D012354 ORTHO05D009345 8.1e-09 66.6 52 63.5
Sed0024836 Sechium edule HOM05D007748 ORTHO05D009345 1.1e-08 66.2 52 63.5
Glyma.12G107600 Glycine max HOM05D007748 ORTHO05D009345 3.1e-08 64.7 661 25.0
Lj3g0024600 Lotus japonicus HOM05D007748 ORTHO05D009345 3.1e-08 64.7 655 30.4
ECA246G0851 Erigeron canadensis HOM05D007748 ORTHO05D009345 8.9e-08 63.2 180 28.3
DCAR_009731 Daucus carota HOM05D007748 ORTHO05D009345 2.0e-07 62.0 72 54.2
Sc21g0002430 Simmondsia chinensis HOM05D007748 ORTHO05D009345 2.0e-07 62.0 47 61.7
HanXRQChr15g0480361 Helianthus annuus HOM05D007748 ORTHO05D009345 3.4e-07 61.2 162 29.0
PSO541G5470 Papaver somniferum HOM05D007748 ORTHO05D009345 3.4e-07 61.2 618 23.8
Actinidia12452 Actinidia chinensis HOM05D007748 ORTHO05D009345 9.9e-07 59.7 681 27.5
Lsat_1_v5_gn_3_39541 Lactuca sativa HOM05D007748 ORTHO05D009345 2.2e-06 58.5 160 28.1
Cpa.g.sc34.108 Carica papaya HOM05D007748 ORTHO05D009345 2.9e-06 58.2 42 69.0


User provided reference genes

Program Settings