Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra19G0112000 Salix brachista HOM05D002160 ORTHO05D002012 9.4e-25 115.9 54 100.0
Potri.009G030800 Populus trichocarpa HOM05D002160 ORTHO05D002012 3.2e-12 74.3 53 71.7
TWI31G0095 Tripterygium wilfordii HOM05D002160 ORTHO05D002012 9.2e-12 72.8 66 54.5
MD11G1109100 Malus domestica HOM05D002160 ORTHO05D002012 1.2e-11 72.4 62 58.1
Potri.013G131200 Populus trichocarpa HOM05D002160 ORTHO05D002012 2.7e-11 71.2 57 68.4
TWI79G1473 Tripterygium wilfordii HOM05D002160 ORTHO05D002012 1.0e-10 69.3 51 66.7
Potri.001G239650 Populus trichocarpa HOM05D002160 ORTHO05D002012 1.3e-10 68.9 50 68.0
Potri.001G040200 Populus trichocarpa HOM05D002160 ORTHO05D002012 1.7e-10 68.6 60 63.3
Potri.001G041268 Populus trichocarpa HOM05D002160 ORTHO05D002012 1.7e-10 68.6 60 63.3
Haze_11621 Corylus avellana HOM05D002160 ORTHO05D002012 2.3e-10 68.2 47 70.2
Prupe.6G077800 Prunus persica HOM05D002160 ORTHO05D002012 2.3e-10 68.2 66 53.0
Potri.019G100001 Populus trichocarpa HOM05D002160 ORTHO05D002012 5.0e-10 67.0 57 63.2
Prupe.6G077900 Prunus persica HOM05D002160 ORTHO05D002012 6.6e-10 66.6 64 50.0
TWI31G0007 Tripterygium wilfordii HOM05D002160 ORTHO05D002012 1.1e-09 65.9 51 60.8
Atru.chr3.3900 Acer truncatum HOM05D002160 ORTHO05D002012 1.5e-09 65.5 68 54.4
Atru.chr3.3901 Acer truncatum HOM05D002160 ORTHO05D002012 1.5e-09 65.5 68 54.4
Atru.chr3.3902 Acer truncatum HOM05D002160 ORTHO05D002012 1.5e-09 65.5 52 65.4
CiPaw.14G068500 Carya illinoinensis HOM05D002160 ORTHO05D002012 3.3e-09 64.3 53 64.2
TWI31G0178 Tripterygium wilfordii HOM05D002160 ORTHO05D002012 3.3e-09 64.3 51 60.8
Cfa011500 Carpinus fangiana HOM05D002160 ORTHO05D002012 4.3e-09 63.9 64 50.0
GSVIVG01034174001 Vitis vinifera HOM05D002160 ORTHO05D002012 5.6e-09 63.5 51 66.7
FAN21G3063 Fragaria x ananassa HOM05D015563 ORTHO05D002012 7.3e-09 63.2 68 50.0
Haze_24095 Corylus avellana HOM05D002160 ORTHO05D002012 9.5e-09 62.8 64 48.4
CiPaw.10G145500 Carya illinoinensis HOM05D002160 ORTHO05D002012 1.6e-08 62.0 69 52.2
GSVIVG01027808001 Vitis vinifera HOM05D002160 ORTHO05D002012 1.6e-08 62.0 52 63.5
TAR369G0024 Trochodendron aralioides HOM05D002160 ORTHO05D002012 2.1e-08 61.6 51 62.7
CiPaw.09G192500 Carya illinoinensis HOM05D002160 ORTHO05D002012 3.6e-08 60.8 50 58.0
QL07p048273 Quercus lobata HOM05D002160 ORTHO05D002012 4.7e-08 60.5 50 60.0
CSS0038374 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 6.1e-08 60.1 50 56.0
CSS0042900 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 6.1e-08 60.1 50 56.0
Actinidia26465 Actinidia chinensis HOM05D002160 ORTHO05D002012 1.4e-07 58.9 49 57.1
CiPaw.13G094600 Carya illinoinensis HOM05D002160 ORTHO05D002012 1.8e-07 58.5 54 63.0
Duzib093G1046 Durio zibethinus HOM05D002160 ORTHO05D002012 1.8e-07 58.5 50 54.0
Gohir.A04G082400 Gossypium hirsutum HOM05D002160 ORTHO05D002012 1.8e-07 58.5 50 54.0
Gohir.D04G121400 Gossypium hirsutum HOM05D002160 ORTHO05D002012 2.3e-07 58.2 50 54.0
CiPaw.03G262000 Carya illinoinensis HOM05D002160 ORTHO05D002012 3.1e-07 57.8 60 48.3
Dinv35604 Davidia involucrata HOM05D002160 ORTHO05D002012 3.1e-07 57.8 42 61.9
Duzib106G1044 Durio zibethinus HOM05D002160 ORTHO05D002012 3.1e-07 57.8 50 54.0
Rhsim05G0192600 Rhododendron simsii HOM05D002160 ORTHO05D002012 3.1e-07 57.8 49 57.1
Duzib128G1340 Durio zibethinus HOM05D002160 ORTHO05D002012 4.0e-07 57.4 50 52.0
Gohir.D01G211900 Gossypium hirsutum HOM05D002160 ORTHO05D002012 4.0e-07 57.4 41 56.1
Gorai.002G257700 Gossypium raimondii HOM05D002160 ORTHO05D002012 4.0e-07 57.4 41 56.1
Lalb_Chr12g0210241 Lupinus albus HOM05D002160 ORTHO05D002012 5.2e-07 57.0 65 49.2
QL07p048278 Quercus lobata HOM05D002160 ORTHO05D002012 5.2e-07 57.0 53 56.6
CsaV3_3G034920 Cucumis sativus L. HOM05D002160 ORTHO05D002012 6.8e-07 56.6 51 62.7
Gorai.012G103800 Gossypium raimondii HOM05D002160 ORTHO05D002012 6.8e-07 56.6 50 52.0
COL.COLO4_19168 Corchorus olitorius HOM05D002160 ORTHO05D002012 8.9e-07 56.2 41 58.5
MBI14_g20107_MAGBIO Magnolia biondii HOM05D002160 ORTHO05D002012 8.9e-07 56.2 51 54.9
MD12G1141500 Malus domestica HOM05D002160 ORTHO05D002012 8.9e-07 56.2 51 51.0
Thecc.05G039800 Theobroma cacao HOM05D002160 ORTHO05D002012 8.9e-07 56.2 54 50.0
TAR633G1907 Trochodendron aralioides HOM05D002160 ORTHO05D002012 8.9e-07 56.2 50 50.0
Oeu007792.1 Olea europaea HOM05D002160 ORTHO05D002012 1.2e-06 55.8 53 52.8
PGR004G1599 Punica granatum HOM05D002160 ORTHO05D002012 1.2e-06 55.8 51 52.9
MELO3C009260.2 Cucumis melo HOM05D002160 ORTHO05D002012 1.5e-06 55.5 51 60.8
Gohir.A01G222400 Gossypium hirsutum HOM05D002160 ORTHO05D002012 1.5e-06 55.5 41 53.7
Lalb_Chr03g0042231 Lupinus albus HOM05D002160 ORTHO05D002012 2.0e-06 55.1 42 54.8
MD04G1128900 Malus domestica HOM05D002160 ORTHO05D002012 2.6e-06 54.7 51 49.0
Prupe.6G255100 Prunus persica HOM05D002160 ORTHO05D002012 3.4e-06 54.3 50 54.0
Glyma.07G132000 Glycine max HOM05D002160 ORTHO05D002012 4.4e-06 53.9 51 52.9
Eucgr.A01262 Eucalyptus grandis HOM05D002160 ORTHO05D002012 5.8e-06 53.5 52 50.0
MD11G1109200 Malus domestica HOM05D015563 ORTHO05D002012 5.8e-06 53.5 54 51.9
Oeu036147.1 Olea europaea HOM05D002160 ORTHO05D002012 9.8e-06 52.8 50 54.0


User provided reference genes

Program Settings