Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra19G0100100 Salix brachista HOM05D006652 ORTHO05D008645 3.9e-207 724.5 366 100.0
Sabra19G0103300 Salix brachista HOM05D006652 ORTHO05D008645 1.8e-204 715.7 366 98.4
Potri.019G089700 Populus trichocarpa HOM05D006652 ORTHO05D008645 4.2e-193 677.9 366 93.2
Peaxi162Scf00241g00812 Petunia axillaris HOM05D006652 ORTHO05D008645 1.5e-150 536.6 364 73.4
Dinv08786 Davidia involucrata HOM05D006652 ORTHO05D008645 3.4e-150 535.4 372 71.2
Nitab4.5_0000822g0100 Nicotiana tabacum HOM05D006652 ORTHO05D008645 2.9e-149 532.3 351 74.4
CAN.G782.5 Capsicum annuum HOM05D006652 ORTHO05D008645 3.7e-149 531.9 346 76.3
QL08p041412 Quercus lobata HOM05D006652 ORTHO05D008645 4.1e-148 528.5 364 72.5
vmacro09218 Vaccinium macrocarpon HOM05D006652 ORTHO05D008645 2.7e-147 525.8 321 77.6
GSVIVG01020686001 Vitis vinifera HOM05D006652 ORTHO05D008645 4.6e-147 525.0 372 70.2
Solyc10g008020.3 Solanum lycopersicum HOM05D006652 ORTHO05D008645 6.0e-147 524.6 323 78.6
Sopen10g003890 Solanum pennellii HOM05D006652 ORTHO05D008645 1.0e-146 523.9 323 78.6
Hma1.2p1_0166F.1_g073540 Hydrangea macrophylla HOM05D006652 ORTHO05D008645 1.1e-145 520.4 382 68.3
Lj8C103T10 Lonicera japonica HOM05D006652 ORTHO05D008645 3.3e-145 518.8 362 72.1
Atru.chr6.2810_Atru.chr6.2811 Acer truncatum HOM05D006652 ORTHO05D008645 4.3e-145 518.5 357 72.5
Ca_18890_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 1.6e-144 516.5 369 69.6
Nitab4.5_0008146g0020 Nicotiana tabacum HOM05D006652 ORTHO05D008645 1.6e-144 516.5 349 72.8
Aqoxy4G00418 Aquilegia oxysepala HOM05D006652 ORTHO05D008645 2.8e-144 515.8 372 68.3
Ciclev10015734m.g Citrus clementina HOM05D006652 ORTHO05D008645 2.8e-144 515.8 364 72.0
Migut.H02157 Erythranthe guttata HOM05D006652 ORTHO05D008645 2.8e-144 515.8 324 76.9
TAR629G0548 Trochodendron aralioides HOM05D006652 ORTHO05D008645 2.8e-144 515.8 322 74.8
CiPaw.03G187000 Carya illinoinensis HOM05D006652 ORTHO05D008645 4.7e-144 515.0 374 69.8
Medtr4g079750 Medicago truncatula HOM05D006652 ORTHO05D008645 4.7e-144 515.0 326 75.2
HanXRQChr17g0558041 Helianthus annuus HOM05D006652 ORTHO05D008645 6.2e-144 514.6 341 74.2
Lsat_1_v5_gn_8_140221 Lactuca sativa HOM05D006652 ORTHO05D008645 6.2e-144 514.6 365 70.4
Thecc.01G148700 Theobroma cacao HOM05D006652 ORTHO05D008645 1.4e-143 513.5 344 73.5
arahy.Tifrunner.gnm1.ann1.KP1SVS Arachis hypogaea HOM05D006652 ORTHO05D008645 2.3e-143 512.7 328 75.0
CSS0047332 Camellia sinensis var. sinensis HOM05D006652 ORTHO05D008645 2.3e-143 512.7 334 72.5
AUR62038922 Chenopodium quinoa HOM05D006652 ORTHO05D008645 2.0e-142 509.6 368 68.8
arahy.Tifrunner.gnm1.ann1.5ZDL5Q Arachis hypogaea HOM05D006652 ORTHO05D008645 2.6e-142 509.2 328 74.4
Lj3g0009013 Lotus japonicus HOM05D006652 ORTHO05D008645 3.4e-142 508.8 329 73.6
SalBow7G3656 Salvia bowleyana HOM05D006652 ORTHO05D008645 4.4e-142 508.4 361 70.1
Nn1g04382 Nelumbo nucifera HOM05D006652 ORTHO05D008645 4.9e-141 505.0 355 69.9
MSTRG.14312 Avicennia marina HOM05D006652 ORTHO05D008645 1.9e-140 503.1 334 73.1
COL.COLO4_33547 Corchorus olitorius HOM05D006652 ORTHO05D008645 1.6e-139 500.0 344 70.3
CsaV3_6G018460 Cucumis sativus L. HOM05D006652 ORTHO05D008645 2.1e-139 499.6 365 66.8
EL10Ac9g20915 Beta vulgaris HOM05D006652 ORTHO05D008645 7.8e-139 497.7 365 67.7
Eucgr.K01102 Eucalyptus grandis HOM05D006652 ORTHO05D008645 1.0e-138 497.3 369 65.9
Glyma.12G122700 Glycine max HOM05D006652 ORTHO05D008645 3.0e-138 495.7 372 66.4
Gohir.A10G153800 Gossypium hirsutum HOM05D006652 ORTHO05D008645 6.6e-138 494.6 362 68.0
Phvul.011G134400 Phaseolus vulgaris HOM05D006652 ORTHO05D008645 6.6e-138 494.6 372 64.2
Gorai.011G124200 Gossypium raimondii HOM05D006652 ORTHO05D008645 1.5e-137 493.4 362 67.7
Lalb_Chr19g0134921 Lupinus albus HOM05D006652 ORTHO05D008645 1.5e-137 493.4 340 70.0
Gohir.D10G112300 Gossypium hirsutum HOM05D006652 ORTHO05D008645 1.9e-137 493.0 362 67.7
ECA234G1589 Erigeron canadensis HOM05D006652 ORTHO05D008645 4.3e-137 491.9 324 71.6
Hund07829 Selenicereus undatus HOM05D006652 ORTHO05D008645 4.3e-137 491.9 368 66.0
VMungo1127G0176 Vigna mungo HOM05D006652 ORTHO05D008645 4.3e-137 491.9 343 67.9
PGR142G2816 Punica granatum HOM05D006652 ORTHO05D008645 4.7e-136 488.4 365 66.0
Glyma.06G283400 Glycine max HOM05D006652 ORTHO05D008645 1.1e-135 487.3 373 65.1
unitig_21.g20276 Utricularia gibba HOM05D006652 ORTHO05D008645 1.8e-135 486.5 338 67.8
PGSC0003DMG400010544 Solanum tuberosum HOM05D006652 ORTHO05D008645 6.8e-135 484.6 386 65.3
SGA_v2.0_scaffold109G31132 Striga asiatica HOM05D006652 ORTHO05D008645 4.4e-134 481.9 463 56.2
Zm00001eb223890 Zea mays HOM05D006652 ORTHO05D008645 7.6e-134 481.1 350 67.7
ATR0661G163 Amborella trichopoda HOM05D006652 ORTHO05D008645 4.9e-133 478.4 353 65.7
Duzib187G0644 Durio zibethinus HOM05D006652 ORTHO05D008645 6.4e-133 478.0 374 64.4
Glyma.06G283600 Glycine max HOM05D006652 ORTHO05D008645 8.4e-133 477.6 357 64.7
Os10g0181600 Oryza sativa ssp. japonica HOM05D006652 ORTHO05D008645 1.4e-132 476.9 337 68.5
MBI11_g14404_MAGBIO Magnolia biondii HOM05D006652 ORTHO05D008645 8.1e-128 461.1 346 67.9
Manes.13G137800 Manihot esculenta HOM05D006652 ORTHO05D008645 5.3e-127 458.4 310 70.6
TWI59G0297 Tripterygium wilfordii HOM05D006652 ORTHO05D008645 5.3e-127 458.4 316 73.1
Actinidia39342 Actinidia chinensis HOM05D006652 ORTHO05D008645 9.9e-126 454.1 276 77.2
Cc05_g08190 Coffea canephora HOM05D006652 ORTHO05D008645 2.7e-123 446.0 299 73.2
Cc05_g08160 Coffea canephora HOM05D006652 ORTHO05D008645 2.5e-121 439.5 299 72.2
Psat7g166280 Pisum sativum HOM05D006652 ORTHO05D008645 3.4e-118 429.1 329 68.7
Rhsim04G0074100 Rhododendron simsii HOM05D006652 ORTHO05D008645 9.9e-118 427.6 327 65.1
Sed0018596 Sechium edule HOM05D006652 ORTHO05D008645 3.5e-115 419.1 276 71.0
AUR62038997 Chenopodium quinoa HOM05D006652 ORTHO05D008645 3.9e-114 415.6 382 58.6
CDE11G0921 Ceratophyllum demersum HOM05D006652 ORTHO05D008645 2.3e-106 389.8 265 70.9
Pp3c3_7460 Physcomitrium patens HOM05D006652 ORTHO05D008645 6.7e-106 388.3 322 58.4
Glyma.06G283500 Glycine max HOM05D006652 ORTHO05D008645 8.2e-104 381.3 289 62.6
SMO334G0043 Selaginella moellendorffii HOM05D006652 ORTHO05D008645 7.6e-102 374.8 359 53.2
Mapoly0061s0036 Marchantia polymorpha HOM05D006652 ORTHO05D008645 3.9e-98 362.5 328 52.4
DCAR_013062 Daucus carota HOM05D006652 ORTHO05D008645 1.3e-96 357.5 333 58.9
ClCG02G017930 Citrullus lanatus HOM05D006652 ORTHO05D008645 2.8e-96 356.3 364 54.1
MBI11_g19676_MAGBIO Magnolia biondii HOM05D006652 ORTHO05D008645 3.2e-92 342.8 276 62.7
Cc00_g35820 Coffea canephora HOM05D006652 ORTHO05D008645 5.0e-85 318.9 211 73.9
TPR.G21861 Trifolium pratense HOM05D006652 ORTHO05D008645 4.1e-79 299.3 234 66.2
Ca_18889_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 1.1e-76 291.2 203 70.9
CBR_g20425 Chara braunii HOM05D006652 ORTHO05D008645 2.5e-76 290.0 326 45.4
MELO3C019759.2 Cucumis melo HOM05D006652 ORTHO05D008645 1.0e-74 284.6 221 65.2
Zm00001eb307930 Zea mays HOM05D006652 ORTHO05D008645 6.7e-74 282.0 204 63.2
MCO11G400 Micromonas commoda HOM05D006652 ORTHO05D008645 4.5e-70 269.2 366 40.7
AagrBONN_evm.TU.Sc2ySwM_228.444 Anthoceros agrestis HOM05D006652 ORTHO05D008645 5.9e-70 268.9 233 57.1
PRCOL_00002204 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 3.8e-69 266.2 321 44.9
PGR142G0648 Punica granatum HOM05D006652 ORTHO05D008645 4.2e-68 262.7 211 60.7
CBR_g20426 Chara braunii HOM05D006652 ORTHO05D008645 1.3e-61 241.1 396 37.6
Zm00001eb202810 Zea mays HOM05D006652 ORTHO05D008645 5.0e-61 239.2 257 51.0
Zm00001eb155780 Zea mays HOM05D006652 ORTHO05D008645 1.9e-60 237.3 249 51.4
Cre03.g200350 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D008645 9.8e-57 224.9 348 37.1
Zm00001eb127120 Zea mays HOM05D006652 ORTHO05D008645 3.7e-56 223.0 252 47.6
Mapoly0285s0004 Marchantia polymorpha HOM05D006652 ORTHO05D008645 6.3e-56 222.2 220 50.0
Pp3c17_23540 Physcomitrium patens HOM05D006652 ORTHO05D008645 3.4e-49 199.9 306 37.9
SMO118G0546 Selaginella moellendorffii HOM05D006652 ORTHO05D008645 2.4e-47 193.7 303 36.6
Cre06.g259401 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D008645 5.4e-47 192.6 347 35.2
SEGI_35274 Sequoiadendron giganteum HOM05D006652 ORTHO05D008645 2.0e-46 190.7 306 36.3
Mapoly0050s0024 Marchantia polymorpha HOM05D006652 ORTHO05D008645 1.3e-45 188.0 324 34.9
Haze_13351 Corylus avellana HOM05D006652 ORTHO05D008645 5.0e-45 186.0 120 72.5
arahy.Tifrunner.gnm1.ann1.MYHL2J Arachis hypogaea HOM05D006652 ORTHO05D008645 3.3e-44 183.3 141 61.7
CBR_g34298 Chara braunii HOM05D006652 ORTHO05D008645 9.5e-44 181.8 365 34.2
Ca_18891_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 1.7e-40 171.0 147 63.3
MCO08G076 Micromonas commoda HOM05D006652 ORTHO05D008645 6.0e-38 162.5 318 31.4
ECA234G0151 Erigeron canadensis HOM05D006652 ORTHO05D008645 6.6e-37 159.1 100 72.0
Zm00001eb272210 Zea mays HOM05D006652 ORTHO05D008645 6.6e-37 159.1 202 45.0
Haze_13350 Corylus avellana HOM05D006652 ORTHO05D008645 8.6e-37 158.7 92 78.3
PRCOL_00006996 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 1.9e-36 157.5 311 33.8
AUR62024835 Chenopodium quinoa HOM05D006652 ORTHO05D008645 6.2e-35 152.5 123 61.0
TPR.G21704 Trifolium pratense HOM05D006652 ORTHO05D008645 3.5e-30 136.7 126 54.8
TPR.G21859 Trifolium pratense HOM05D006652 ORTHO05D008645 3.9e-29 133.3 135 50.4
AagrBONN_evm.TU.Sc2ySwM_117.2543 Anthoceros agrestis HOM05D006652 ORTHO05D008645 2.1e-27 127.5 174 40.8
Glyma.12G122501 Glycine max HOM05D006652 ORTHO05D008645 5.8e-17 92.8 84 51.2
Cc05_g08180 Coffea canephora HOM05D006652 ORTHO05D008645 1.7e-16 91.3 54 79.6
Cc05_g08150 Coffea canephora HOM05D006652 ORTHO05D008645 8.4e-16 89.0 54 77.8
PRCOL_00001996 Prasinoderma coloniale HOM05D006652 ORTHO05D028803 1.1e-15 88.6 249 27.7
MCO09G339 Micromonas commoda HOM05D006652 ORTHO05D268879 2.1e-14 84.3 226 28.8
Haze_13352 Corylus avellana HOM05D006652 ORTHO05D008645 1.3e-13 81.6 138 40.6
Ah.07g202300 Amaranthus hybridus HOM05D006652 ORTHO05D008645 2.5e-12 77.4 56 64.3
MCO15G420 Micromonas commoda HOM05D006652 ORTHO05D028803 1.1e-10 72.0 236 24.6
Zm00001eb048070 Zea mays HOM05D001272 ORTHO05D001099 9.0e-10 68.9 55 63.6
Ah.08g222620 Amaranthus hybridus HOM05D006652 ORTHO05D008645 1.2e-09 68.6 100 45.0
Cre06.g286350 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D028803 5.8e-09 66.2 201 25.9
PRCOL_00002129 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 8.4e-08 62.4 180 27.2
Cre14.g624350 Chlamydomonas reinhardtii HOM05D003793 ORTHO05D004471 1.1e-07 62.0 116 34.5
Cre06.g286300 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D028803 5.4e-07 59.7 197 24.4
Aqoxy6G01753 Aquilegia oxysepala HOM05D003793 ORTHO05D004471 1.2e-06 58.5 148 33.1
SMO119G0172 Selaginella moellendorffii HOM05D003793 ORTHO05D004471 2.1e-06 57.8 141 31.2
SMO115G0333 Selaginella moellendorffii HOM05D003793 ORTHO05D004471 2.7e-06 57.4 141 31.2
SMO351G0374 Selaginella moellendorffii HOM05D003793 ORTHO05D004471 2.7e-06 57.4 141 31.2
HPP92_022760 Vanilla planifolia HOM05D003793 ORTHO05D004471 4.6e-06 56.6 106 34.9
PRCOL_00002005 Prasinoderma coloniale HOM05D003793 ORTHO05D004471 7.9e-06 55.8 105 34.3


User provided reference genes

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