Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra19G0088900 Salix brachista HOM05D008094 ORTHO05D010082 1.1e-72 276.6 137 100.0
Potri.019G078000 Populus trichocarpa HOM05D008094 ORTHO05D010082 2.1e-57 225.7 158 76.6
CiPaw.07G234200 Carya illinoinensis HOM05D008094 ORTHO05D010082 3.5e-23 112.1 161 42.9
TAR628G1718 Trochodendron aralioides HOM05D008094 ORTHO05D010082 5.0e-22 108.2 169 38.5
Aqoxy5G01193 Aquilegia oxysepala HOM05D008094 ORTHO05D010082 6.8e-19 97.8 170 40.0
Dinv29599 Davidia involucrata HOM05D008094 ORTHO05D010082 4.8e-17 91.7 126 44.4
Nn3g18571 Nelumbo nucifera HOM05D008094 ORTHO05D010082 6.3e-17 91.3 165 38.8
TPR.G2107 Trifolium pratense HOM05D008094 ORTHO05D010082 1.4e-16 90.1 161 41.0
Nn1g09196 Nelumbo nucifera HOM05D008094 ORTHO05D010082 3.1e-16 89.0 165 35.2
Oeu021214.1 Olea europaea HOM05D008094 ORTHO05D010082 7.0e-16 87.8 160 35.0
MBI03_g07689_MAGBIO Magnolia biondii HOM05D008094 ORTHO05D010082 3.5e-15 85.5 155 38.7
Psat1g222640 Pisum sativum HOM05D008094 ORTHO05D010082 1.7e-14 83.2 160 37.5
Cfa004482 Carpinus fangiana HOM05D008094 ORTHO05D010082 2.2e-14 82.8 161 35.4
Lalb_Chr15g0090761 Lupinus albus HOM05D008094 ORTHO05D010082 1.1e-13 80.5 155 38.7
Eucgr.I02770 Eucalyptus grandis HOM05D008094 ORTHO05D010082 5.5e-13 78.2 156 37.8
Thecc.08G192900 Theobroma cacao HOM05D023304 ORTHO05D025172 2.1e-12 76.3 125 40.0
Oeu045164.1 Olea europaea HOM05D008094 ORTHO05D010082 6.1e-12 74.7 117 41.0
Hma1.2p1_0633F.1_g192710 Hydrangea macrophylla HOM05D008094 ORTHO05D010082 8.0e-12 74.3 190 32.6
Rhsim05G0113700 Rhododendron simsii HOM05D008094 ORTHO05D010082 1.0e-11 73.9 187 34.2
Cfa012997 Carpinus fangiana HOM05D008094 ORTHO05D010082 2.3e-11 72.8 150 34.7
Potri.003G006100 Populus trichocarpa HOM05D008094 ORTHO05D010082 8.8e-11 70.9 175 31.4
Nn3g19209 Nelumbo nucifera HOM05D008094 ORTHO05D010082 3.4e-10 68.9 133 36.8
Nitab4.5_0001579g0050 Nicotiana tabacum HOM05D036302 ORTHO05D010082 3.4e-10 68.9 103 41.7
Thecc.02G017400 Theobroma cacao HOM05D008094 ORTHO05D010082 7.5e-10 67.8 172 32.6
Migut.C01270 Erythranthe guttata HOM05D008094 ORTHO05D010082 9.8e-10 67.4 165 33.3
Potri.004G224600 Populus trichocarpa HOM05D008094 ORTHO05D010082 1.7e-09 66.6 171 32.7
Medtr2g005710 Medicago truncatula HOM05D008094 ORTHO05D010082 4.8e-09 65.1 162 32.7
Sabra03G0003200 Salix brachista HOM05D008094 ORTHO05D010082 8.3e-09 64.3 146 34.9
Ca_00034_v3 Cicer arietinum L. HOM05D008094 ORTHO05D010082 1.1e-08 63.9 108 39.8
COL.COLO4_24645 Corchorus olitorius HOM05D023304 ORTHO05D025172 1.4e-08 63.5 98 42.9
ATR1136G131 Amborella trichopoda HOM05D008094 ORTHO05D010082 2.4e-08 62.8 93 39.8
Glyma.16G002700 Glycine max HOM05D008094 ORTHO05D010082 3.1e-08 62.4 104 40.4
PSO782G4978 Papaver somniferum HOM05D008094 ORTHO05D010082 3.1e-08 62.4 129 36.4
QL02p100749 Quercus lobata HOM05D008094 ORTHO05D010082 9.1e-08 60.8 179 31.8
Cpa.g.sc113.38 Carica papaya HOM05D008094 ORTHO05D010082 1.2e-07 60.5 120 36.7
arahy.Tifrunner.gnm1.ann1.8474VB Arachis hypogaea HOM05D008094 ORTHO05D010082 2.7e-07 59.3 111 36.9
arahy.Tifrunner.gnm1.ann1.V5JGY8 Arachis hypogaea HOM05D008094 ORTHO05D010082 2.7e-07 59.3 111 36.9
arahy.Tifrunner.gnm1.ann1.4TXG74 Arachis hypogaea HOM05D008094 ORTHO05D010082 4.5e-07 58.5 140 35.0
Prupe.1G579700 Prunus persica HOM05D008094 ORTHO05D010082 4.5e-07 58.5 174 33.3
Lj6g0003255 Lotus japonicus HOM05D008094 ORTHO05D010082 5.9e-07 58.2 134 38.1
MELO3C016497.2 Cucumis melo HOM05D008094 ORTHO05D010082 7.7e-07 57.8 175 32.0
DCAR_029178 Daucus carota HOM05D008094 ORTHO05D010082 7.7e-07 57.8 169 32.0
Migut.B00764 Erythranthe guttata HOM05D008094 ORTHO05D010082 7.7e-07 57.8 151 33.8
Glyma.12G166400 Glycine max HOM05D008094 ORTHO05D010082 7.7e-07 57.8 98 40.8
Duzib132G1075 Durio zibethinus HOM05D008094 ORTHO05D010082 1.0e-06 57.4 114 36.8
Gohir.A13G118800 Gossypium hirsutum HOM05D023304 ORTHO05D025172 1.3e-06 57.0 128 33.6
Gohir.D13G122600 Gossypium hirsutum HOM05D023304 ORTHO05D025172 1.3e-06 57.0 128 33.6
Gorai.013G137400 Gossypium raimondii HOM05D023304 ORTHO05D025172 1.7e-06 56.6 128 33.6
Actinidia01611 Actinidia chinensis HOM05D008094 ORTHO05D010082 2.9e-06 55.8 83 39.8
Oeu010208.1 Olea europaea HOM05D008094 ORTHO05D010082 3.8e-06 55.5 133 33.1
Thecc.09G289000 Theobroma cacao HOM05D030546 ORTHO05D022262 5.0e-06 55.1 99 35.4
Nitab4.5_0000787g0100 Nicotiana tabacum HOM05D008094 ORTHO05D010082 6.6e-06 54.7 147 30.6


User provided reference genes

Program Settings