Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra19G0086800 Salix brachista HOM05D006738 ORTHO05D008191 1.3e-62 243.0 140 100.0
Potri.019G076400 Populus trichocarpa HOM05D006738 ORTHO05D008191 4.3e-61 238.0 140 97.9
Atru.chr12.822 Acer truncatum HOM05D006738 ORTHO05D008191 7.6e-50 200.7 141 83.7
Thecc.08G171800 Theobroma cacao HOM05D006738 ORTHO05D008191 2.2e-49 199.1 140 83.6
Ciclev10022763m.g Citrus clementina HOM05D006738 ORTHO05D008191 6.4e-49 197.6 142 83.1
Duzib211G0443 Durio zibethinus HOM05D006738 ORTHO05D008191 6.4e-49 197.6 142 83.8
COL.COLO4_24620 Corchorus olitorius HOM05D006738 ORTHO05D008191 3.2e-48 195.3 142 82.4
Cpa.g.sc21.54 Carica papaya HOM05D006738 ORTHO05D008191 4.1e-48 194.9 136 84.6
Gohir.A05G252100 Gossypium hirsutum HOM05D006738 ORTHO05D008191 7.1e-48 194.1 140 83.6
Gohir.D05G253900 Gossypium hirsutum HOM05D006738 ORTHO05D008191 1.6e-47 193.0 140 82.9
Eucgr.F02960 Eucalyptus grandis HOM05D006738 ORTHO05D008191 3.5e-47 191.8 140 81.4
Manes.02G195900 Manihot esculenta HOM05D006738 ORTHO05D008191 1.0e-46 190.3 143 81.8
TWI14G1101 Tripterygium wilfordii HOM05D006738 ORTHO05D008191 1.3e-46 189.9 141 78.0
PGR042G2463 Punica granatum HOM05D006738 ORTHO05D008191 2.3e-46 189.1 140 81.4
MD08G1215600 Malus domestica HOM05D006738 ORTHO05D008191 3.9e-46 188.3 140 79.3
MD15G1400100 Malus domestica HOM05D006738 ORTHO05D008191 6.6e-46 187.6 140 79.3
Prupe.1G547300 Prunus persica HOM05D006738 ORTHO05D008191 4.3e-45 184.9 140 78.6
Nitab4.5_0006564g0050 Nicotiana tabacum HOM05D006738 ORTHO05D008191 3.1e-43 178.7 140 67.9
HPP92_002035 Vanilla planifolia HOM05D006738 ORTHO05D008191 6.9e-43 177.6 136 80.9
GSVIVG01025906001 Vitis vinifera HOM05D006738 ORTHO05D008191 6.9e-43 177.6 144 75.7
ECA234G1792 Erigeron canadensis HOM05D006738 ORTHO05D008191 8.9e-43 177.2 140 63.6
Solyc06g064810.3 Solanum lycopersicum HOM05D006738 ORTHO05D008191 2.6e-42 175.6 140 67.1
Sopen06g023320 Solanum pennellii HOM05D006738 ORTHO05D008191 2.6e-42 175.6 140 67.1
CSS0018644 Camellia sinensis var. sinensis HOM05D006738 ORTHO05D008191 4.4e-42 174.9 143 67.8
CSS0019392 Camellia sinensis var. sinensis HOM05D006738 ORTHO05D008191 4.4e-42 174.9 143 67.8
PGSC0003DMG400005175 Solanum tuberosum HOM05D006738 ORTHO05D008191 4.4e-42 174.9 140 67.1
Migut.C01346 Erythranthe guttata HOM05D006738 ORTHO05D008191 5.8e-42 174.5 140 63.6
THA.LOC104815902 Tarenaya hassleriana HOM05D006738 ORTHO05D008191 5.8e-42 174.5 136 79.4
CANSAT11G1518 Cannabis sativa HOM05D006738 ORTHO05D008191 1.3e-41 173.3 140 75.0
Lsat_1_v5_gn_5_78501 Lactuca sativa HOM05D006738 ORTHO05D008191 1.3e-41 173.3 138 64.5
Dinv41794 Davidia involucrata HOM05D006738 ORTHO05D008191 1.7e-41 172.9 144 76.4
Sc20g0004710 Simmondsia chinensis HOM05D006738 ORTHO05D008191 2.2e-41 172.6 141 66.0
arahy.Tifrunner.gnm1.ann1.WI646Q Arachis hypogaea HOM05D006738 ORTHO05D008191 8.4e-41 170.6 139 63.3
MELO3C022198.2 Cucumis melo HOM05D006738 ORTHO05D008191 8.4e-41 170.6 136 73.5
Oeu048220.2 Olea europaea HOM05D006738 ORTHO05D008191 8.4e-41 170.6 140 75.0
RcHm_v2.0_Chr7g0216321 Rosa chinensis HOM05D006738 ORTHO05D008191 1.4e-40 169.9 143 63.6
CiPaw.03G017200 Carya illinoinensis HOM05D006738 ORTHO05D008191 1.9e-40 169.5 142 73.2
AT1G33810 Arabidopsis thaliana HOM05D006738 ORTHO05D008191 2.4e-40 169.1 136 63.2
CiPaw.04G011300 Carya illinoinensis HOM05D006738 ORTHO05D008191 3.2e-40 168.7 142 72.5
AL1G48260 Arabidopsis lyrata HOM05D006738 ORTHO05D008191 5.4e-40 167.9 137 63.5
arahy.Tifrunner.gnm1.ann1.67ZQRX Arachis hypogaea HOM05D006738 ORTHO05D008191 5.4e-40 167.9 139 62.6
FvH4_5g25840 Fragaria vesca HOM05D006738 ORTHO05D008191 9.3e-40 167.2 142 62.7
FAN18G1689 Fragaria x ananassa HOM05D006738 ORTHO05D008191 9.3e-40 167.2 142 62.7
QL09p004200 Quercus lobata HOM05D006738 ORTHO05D008191 9.3e-40 167.2 144 72.9
FAN08G0599 Fragaria x ananassa HOM05D006738 ORTHO05D008191 1.2e-39 166.8 142 62.7
TPR.G34128 Trifolium pratense HOM05D006738 ORTHO05D008191 1.6e-39 166.4 140 72.1
unitig_748.g7730 Utricularia gibba HOM05D000331 ORTHO05D003399 1.6e-39 166.4 142 64.1
CsaV3_5G040220 Cucumis sativus L. HOM05D006738 ORTHO05D008191 2.1e-39 166.0 136 66.9
Nn5g27492 Nelumbo nucifera HOM05D006738 ORTHO05D008191 2.1e-39 166.0 141 75.2
QL09p002987 Quercus lobata HOM05D006738 ORTHO05D008191 2.7e-39 165.6 144 61.8
FAN04G1736 Fragaria x ananassa HOM05D006738 ORTHO05D008191 6.0e-39 164.5 142 62.0
AUR62032974 Chenopodium quinoa HOM05D006738 ORTHO05D008191 7.8e-39 164.1 144 72.9
Glyma.01G010600 Glycine max HOM05D006738 ORTHO05D008191 7.8e-39 164.1 138 71.7
SGA_v2.0_scaffold24G10619 Striga asiatica HOM05D006738 ORTHO05D008191 7.8e-39 164.1 139 71.2
Cc10_g09240 Coffea canephora HOM05D006738 ORTHO05D008191 1.3e-38 163.3 139 74.1
Sed0003815 Sechium edule HOM05D006738 ORTHO05D008191 1.3e-38 163.3 137 68.6
Lj3g0020973 Lotus japonicus HOM05D006738 ORTHO05D008191 1.7e-38 162.9 138 60.9
QL09p004074 Quercus lobata HOM05D006738 ORTHO05D008191 1.7e-38 162.9 144 71.5
A09p32610 Brassica napus HOM05D006738 ORTHO05D008191 2.3e-38 162.5 137 65.0
BraA09t38801Z Brassica rapa HOM05D006738 ORTHO05D008191 2.3e-38 162.5 137 65.0
Psat0s2394g0120 Pisum sativum HOM05D006738 ORTHO05D008191 2.3e-38 162.5 138 73.2
Aa31LG6G8130 Aethionema arabicum HOM05D000065 ORTHO05D000162 3.0e-38 162.2 137 74.5
arahy.Tifrunner.gnm1.ann1.H480WY Arachis hypogaea HOM05D006738 ORTHO05D008191 3.0e-38 162.2 135 61.5
Carub.0001s3198 Capsella rubella HOM05D006738 ORTHO05D008191 3.9e-38 161.8 137 74.5
BolC6t36356H Brassica oleracea HOM05D006738 ORTHO05D008191 5.1e-38 161.4 136 64.0
C06p12150 Brassica napus HOM05D006738 ORTHO05D008191 6.6e-38 161.0 136 64.0
CARHR033210 Cardamine hirsuta HOM05D006738 ORTHO05D008191 6.6e-38 161.0 136 72.8
AUR62017706 Chenopodium quinoa HOM05D006738 ORTHO05D008191 6.6e-38 161.0 138 74.6
Medtr4g031650 Medicago truncatula HOM05D006738 ORTHO05D008191 8.7e-38 160.6 140 70.0
Sp1g29140 Schrenkiella parvula HOM05D006738 ORTHO05D008191 8.7e-38 160.6 140 74.3
BcaC08g43833 Brassica carinata HOM05D006738 ORTHO05D008191 1.1e-37 160.2 136 64.0
CDE05G2754 Ceratophyllum demersum HOM05D006738 ORTHO05D008191 2.5e-37 159.1 136 66.9
Thhalv10009075m.g Eutrema salsugineum HOM05D006738 ORTHO05D008191 3.3e-37 158.7 136 75.0
BcaB07g33015 Brassica carinata HOM05D006738 ORTHO05D008191 7.3e-37 157.5 136 73.5
DCAR_002119 Daucus carota HOM05D006738 ORTHO05D008191 7.3e-37 157.5 141 61.0
Phvul.002G133500 Phaseolus vulgaris HOM05D006738 ORTHO05D008191 7.3e-37 157.5 138 69.6
VMungo1215G3331 Vigna mungo HOM05D006738 ORTHO05D008191 1.6e-36 156.4 138 60.1
PSO170G3684 Papaver somniferum HOM05D006738 ORTHO05D008191 2.1e-36 156.0 139 71.9
Lalb_Chr01g0000011 Lupinus albus HOM05D006738 ORTHO05D008191 2.8e-36 155.6 136 69.9
Aqoxy6G00074 Aquilegia oxysepala HOM05D006738 ORTHO05D008191 8.1e-36 154.1 142 55.6
EL10Ac9g22957 Beta vulgaris HOM05D006738 ORTHO05D008191 8.1e-36 154.1 142 58.5
Haze_13918 Corylus avellana HOM05D006738 ORTHO05D008191 8.1e-36 154.1 146 58.2
Ah.01g012440 Amaranthus hybridus HOM05D006738 ORTHO05D008191 1.1e-35 153.7 138 59.4
PSO782G5196 Papaver somniferum HOM05D006738 ORTHO05D008191 1.4e-35 153.3 139 72.7
ATR1089G071 Amborella trichopoda HOM05D006738 ORTHO05D008191 5.3e-35 151.4 136 70.6
Lj2A790G37 Lonicera japonica HOM05D006738 ORTHO05D008191 9.0e-35 150.6 115 71.3
Gorai.009G265500 Gossypium raimondii HOM05D006738 ORTHO05D008191 1.2e-34 150.2 115 81.7
Os08g0112600 Oryza sativa ssp. japonica HOM05D006738 ORTHO05D008191 1.5e-34 149.8 142 57.0
Rhsim07G0068100 Rhododendron simsii HOM05D006738 ORTHO05D008191 1.7e-33 146.4 156 53.2
Peaxi162Scf00269g01621 Petunia axillaris HOM05D006738 ORTHO05D008191 2.3e-30 136.0 140 55.7
Actinidia29399 Actinidia chinensis HOM05D006738 ORTHO05D008191 9.0e-27 124.0 111 73.0
MBI03_g14516_MAGBIO Magnolia biondii HOM05D006738 ORTHO05D008191 1.2e-26 123.6 99 79.8
vmacro13762 Vaccinium macrocarpon HOM05D006738 ORTHO05D008191 4.5e-26 121.7 132 52.3
Zm00001eb260580 Zea mays HOM05D006738 ORTHO05D008191 4.6e-23 111.7 119 62.2
Cfa008114 Carpinus fangiana HOM05D006738 ORTHO05D008191 6.0e-23 111.3 140 47.1
QL09p000479 Quercus lobata HOM05D006738 ORTHO05D008191 6.0e-23 111.3 120 51.7
CiPaw.09G026000 Carya illinoinensis HOM05D006738 ORTHO05D008191 3.9e-22 108.6 150 48.0
QL09p000618 Quercus lobata HOM05D006738 ORTHO05D008191 3.9e-22 108.6 99 58.6
QL09p000342 Quercus lobata HOM05D006738 ORTHO05D008191 1.6e-20 103.2 144 47.2
SEGI_33861 Sequoiadendron giganteum HOM05D006738 ORTHO05D008191 2.1e-20 102.8 116 62.9
FAN13G2380 Fragaria x ananassa HOM05D006738 ORTHO05D008191 8.1e-20 100.9 140 45.7
SMO118G0306 Selaginella moellendorffii HOM05D006738 ORTHO05D008191 1.4e-19 100.1 130 40.8
HanXRQChr10g0309751 Helianthus annuus HOM05D006738 ORTHO05D008191 3.1e-19 99.0 77 64.9
Cc10_g16410 Coffea canephora HOM05D006738 ORTHO05D008191 1.5e-18 96.7 77 62.3
Mapoly0047s0047 Marchantia polymorpha HOM05D006738 ORTHO05D008191 5.8e-18 94.7 117 41.9
SHI08988 Sapria himalayana HOM05D006738 ORTHO05D008191 5.8e-18 94.7 77 59.7
Zm00001eb236960 Zea mays HOM05D002538 ORTHO05D008191 7.6e-18 94.4 111 45.9
AagrBONN_evm.TU.Sc2ySwM_228.5134 Anthoceros agrestis HOM05D006738 ORTHO05D008191 3.8e-17 92.0 124 36.3
ClCG08G000640 Citrullus lanatus HOM05D006738 ORTHO05D008191 1.1e-16 90.5 73 61.6
Pp3c3_5650 Physcomitrium patens HOM05D006738 ORTHO05D008191 5.5e-16 88.2 129 38.0
Medtr4g031845 Medicago truncatula HOM05D006738 ORTHO05D008191 5.1e-14 81.6 69 60.9
Oeu017736.2 Olea europaea HOM05D006738 ORTHO05D008191 8.7e-14 80.9 89 50.6
QL09p003020 Quercus lobata HOM05D006738 ORTHO05D008191 4.8e-12 75.1 70 55.7
Hma1.2p1_0935F.1_g238670 Hydrangea macrophylla HOM05D006738 ORTHO05D008191 1.1e-11 73.9 45 75.6
Glyma.09G210500 Glycine max HOM05D006738 ORTHO05D008191 1.5e-10 70.1 75 50.7
Zm00001eb223600 Zea mays HOM05D002538 ORTHO05D008191 1.0e-09 67.4 75 52.0
Zm00001eb351370 Zea mays HOM05D002538 ORTHO05D003162 2.9e-09 65.9 79 48.1
Zm00001eb166970 Zea mays HOM05D002538 ORTHO05D003162 6.5e-09 64.7 79 48.1
Zm00001eb359390 Zea mays HOM05D006738 ORTHO05D008191 2.5e-08 62.8 78 48.7
CiPaw.16G110800 Carya illinoinensis HOM05D006738 ORTHO05D008191 6.1e-07 58.2 66 50.0


User provided reference genes

Program Settings